CuGenDBv2

Gene ID	Moc01g16680
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Mitochondrial GTPase 1
Genome location	chr1:11092702..11093551
RNA-Seq Expression	Moc01g16680
Synteny	Moc01g16680
Gene Ontology terms	GO:0000911 - cytokinesis by cell plate formation (biological process) GO:0048481 - plant ovule development (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8649358.1 hypothetical protein Csa_019164 [Cucumis sativus]

6.6e-24

77.33

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGAINWFPGHMAAA +AIR RLKLA+MVIEV+++RIPLS ANQ+LQP L+S RR+I+L KKDLANPNI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

XP_022156767.1 short integuments 2, mitochondrial isoform X1 [Momordica charantia]

7.0e-26

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGAINWFPGHMAAA +AIRERLKLA+MVIEV++ARIPLS ANQ+LQPQLSS RRII+L KKDLANPNI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

XP_031740287.1 short integuments 2, mitochondrial isoform X2 [Cucumis sativus]

6.6e-24

77.33

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGAINWFPGHMAAA +AIR RLKLA+MVIEV+++RIPLS ANQ+LQP L+S RR+I+L KKDLANPNI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

XP_038883550.1 short integuments 2, mitochondrial isoform X1 [Benincasa hispida]

3.9e-24

77.33

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGA+NWFPGHMAAA +AIR RLKLA+MVIEV+++RIPLS ANQ+LQP LSS RR+I+L KKDLANPNI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

XP_038883551.1 short integuments 2, mitochondrial isoform X2 [Benincasa hispida]

3.9e-24

77.33

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGA+NWFPGHMAAA +AIR RLKLA+MVIEV+++RIPLS ANQ+LQP LSS RR+I+L KKDLANPNI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L141 G domain-containing protein

3.2e-24

77.33

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGAINWFPGHMAAA +AIR RLKLA+MVIEV+++RIPLS ANQ+LQP L+S RR+I+L KKDLANPNI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

A0A1S3CCP6 Mitochondrial GTPase 1

7.1e-24

77.33

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGAINWFPGHMAAA++AIR RLKLA+MVIEV+++RIPLS ANQ+LQP LSS RR+I+L KKDLAN NI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

A0A5A7ULU0 Short integuments 2

7.1e-24

77.33

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGAINWFPGHMAAA++AIR RLKLA+MVIEV+++RIPLS ANQ+LQP LSS RR+I+L KKDLAN NI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

A0A5D3CIR7 Short integuments 2

7.1e-24

77.33

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGAINWFPGHMAAA++AIR RLKLA+MVIEV+++RIPLS ANQ+LQP LSS RR+I+L KKDLAN NI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

A0A6J1DRI9 short integuments 2, mitochondrial isoform X1

3.4e-26

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        MEF+AGGGAINWFPGHMAAA +AIRERLKLA+MVIEV++ARIPLS ANQ+LQPQLSS RRII+L KKDLANPNI+
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

SwissProt top hits

e value

%identity

Alignment

A8FD69 Ribosome biogenesis GTPase A

1.1e-08

43.08

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Query:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNI
        I WFPGHMA A + + E+LKL ++V E+ +ARIP+S  N  ++  L +  +I+ L K D A+P +
Subjt:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNI

B7GGD6 Ribosome biogenesis GTPase A

2.8e-09

44.62

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Query:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNI
        I WFPGHMA A + + E+LKL ++V E+ +ARIP+S  N  +   +++  RII L K D+A+P++
Subjt:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNI

C5D8U8 Ribosome biogenesis GTPase A

6.2e-09

44.62

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Query:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNI
        I WFPGHMA A + ++E+LKL ++V E+ +ARIPLS  N  +   L +  RI+ L K D+A+  +
Subjt:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNI

Q819W8 Ribosome biogenesis GTPase A

3.1e-08

41.54

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Query:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNI
        I WFPGHMA A + + E+LKL ++VIE+ +AR+PLS  N  +   ++   R++ L K D+A+  +
Subjt:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNI

Q8L607 Short integuments 2, mitochondrial

1.7e-22

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        M F+   G INWFPGHMAAA +AIR RLKL+++VIEV++ARIPLS AN++LQ Q+S+ RRII+L KKDLANPN+L
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

Arabidopsis top hits

e value

%identity

Alignment

AT2G41670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

1.2e-23

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Query:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL
        M F+   G INWFPGHMAAA +AIR RLKL+++VIEV++ARIPLS AN++LQ Q+S+ RRII+L KKDLANPN+L
Subjt:  MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNIL

AT4G02790.1 GTP-binding family protein

8.3e-09

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Query:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDL
        + W+PGH+    + +RE+LKL ++VIEV++ARIPLS  +  +   L + +RI+ L ++D+
Subjt:  INWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDL

AT4G10650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

3.5e-07

45.16

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Query:  WFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQP-QLSSNRRIISLKKKDLANP
        W+  HMAAA++AI ER+ L + V+E+++ARIPLS   + L+      ++RII L K +LA+P
Subjt:  WFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQP-QLSSNRRIISLKKKDLANP

Sequences

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CDS sequence

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ATGGAATTTTCTGCTGGTGGTGGAGCAATCAATTGGTTTCCCGGGCATATGGCGGCAGCAATGCAAGCCATTCGCGAGAGACTGAAGCTGGCGAATATGGTGATCGAGGT
CAAAGAGGCCCGCATTCCCTTGTCGCCAGCGAACCAAAACCTTCAGCCTCAACTTTCTTCTAACCGCCGCATCATCTCCCTCAAAAAGAAAGATTTGGCTAACCCCAATA
TCTTGATCTGTGAAGGATGCGATGGTGGGCGAGGAGCGTATTGCTCAATATCTACTGGCTGTTTTGAATACTCGGGGGACTTTTCTCCATTGGAGGCAGTTGAATAA

mRNA sequence

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Protein sequence

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MEFSAGGGAINWFPGHMAAAMQAIRERLKLANMVIEVKEARIPLSPANQNLQPQLSSNRRIISLKKKDLANPNILICEGCDGGRGAYCSISTGCFEYSGDFSPLEAVE

Moc01g16680 (gene) of Bitter gourd (OHB3-1) v2 genome