; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g16780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g16780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionExocyst complex component sec3A
Genome locationchr1:11202872..11207261
RNA-Seq ExpressionMoc01g16780
SyntenyMoc01g16780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER25847.1 exocyst complex component sec3A, partial [Striga asiatica]4.1e-0541.33Show/hide
Query:  MEAVGFGVRERVDGVLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQVGGELVGGSGVRRRAR---ERGDVVKVVEMDEVGAPAAVSGG
        +E+VG  V    D VL+G  ++ VV++D  F       +EGG RAAE    G  G  +V    VGGS VR R R     G   +VVEMD V     V   
Subjt:  MEAVGFGVRERVDGVLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQVGGELVGGSGVRRRAR---ERGDVVKVVEMDEVGAPAAVSGG

Query:  DGAGDAADLGLAVVGGGTDEVDGD-VEGGEEACEVEELVQMALRRERDHD
               +  LAVVGGG +EVDG+   GG+EA E EELV++AL  +  HD
Subjt:  DGAGDAADLGLAVVGGGTDEVDGD-VEGGEEACEVEELVQMALRRERDHD

KAF5785934.1 hypothetical protein HanXRQr2_Chr10g0434661 [Helianthus annuus]9.2e-0571.11Show/hide
Query:  DLGLAVVGGGTDEVDGDVEGGEEACEVEELVQMALRRERDHDDQH
        D  LAVVGGG DEVDGDV GG+EA EVEELV+MAL  ER H   H
Subjt:  DLGLAVVGGGTDEVDGDVEGGEEACEVEELVQMALRRERDHDDQH

KAF5794595.1 hypothetical protein HanXRQr2_Chr08g0329831 [Helianthus annuus]2.0e-0466.67Show/hide
Query:  LGLAVVGGGTDEVDGDVEGGEEACEVEELVQMALRRERDHDDQHRRVVVVV
        LGLAVVGGG D+VD DV  G+EA EVEELV+MAL R+RDH   HR V ++V
Subjt:  LGLAVVGGGTDEVDGDVEGGEEACEVEELVQMALRRERDHDDQHRRVVVVV

KAF7145795.1 hypothetical protein RHSIM_Rhsim04G0104100 [Rhododendron simsii]5.4e-0543.28Show/hide
Query:  VLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQVGGELVGGSGVRRRARER--GDVVKVVEMDEVGAPAAVSGGDGAGDAADLGLAVVG
        VL+   H+ VVD D      G  AEE     A+++G G EG  ++G E VGG  VRRR  ER  G+ V+     +VG         G G   +  LA VG
Subjt:  VLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQVGGELVGGSGVRRRARER--GDVVKVVEMDEVGAPAAVSGGDGAGDAADLGLAVVG

Query:  GGTDEVDGD-VEGGEEACEVEELVQMALRRERDH
        GG  EVDGD V GG+EA EVEELV+MA+  +  H
Subjt:  GGTDEVDGD-VEGGEEACEVEELVQMALRRERDH

KQK14828.1 hypothetical protein BRADI_1g18822v3 [Brachypodium distachyon]2.2e-0641.71Show/hide
Query:  EAVGFGVRERVDGVLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQ---VGGELVGGSGVRRRARERGDVVKVVEMDEVGAPAAVSGGD
        E +  G  +R+ G    RRH  V  DD + R  G+  +E GER+A   G GAEG ++   V  E    SGVR RAR R D          G  A   GG+
Subjt:  EAVGFGVRERVDGVLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQ---VGGELVGGSGVRRRARERGDVVKVVEMDEVGAPAAVSGGD

Query:  ----GAGDAADLGLAVVGGGTDEVDGDVEGGEEACEVEELVQMALRRERDHDDQHRRVVVVVPGG----DSGGNG
                 A  GLA V     EVDGD   GEE  EVEELVQ+ALRRERD  D+ RR     PGG    + GG G
Subjt:  ----GAGDAADLGLAVVGGGTDEVDGDVEGGEEACEVEELVQMALRRERDHDDQHRRVVVVVPGG----DSGGNG

TrEMBL top hitse value%identityAlignment
A0A0Q3JS05 Uncharacterized protein1.1e-0641.71Show/hide
Query:  EAVGFGVRERVDGVLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQ---VGGELVGGSGVRRRARERGDVVKVVEMDEVGAPAAVSGGD
        E +  G  +R+ G    RRH  V  DD + R  G+  +E GER+A   G GAEG ++   V  E    SGVR RAR R D          G  A   GG+
Subjt:  EAVGFGVRERVDGVLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQ---VGGELVGGSGVRRRARERGDVVKVVEMDEVGAPAAVSGGD

Query:  ----GAGDAADLGLAVVGGGTDEVDGDVEGGEEACEVEELVQMALRRERDHDDQHRRVVVVVPGG----DSGGNG
                 A  GLA V     EVDGD   GEE  EVEELVQ+ALRRERD  D+ RR     PGG    + GG G
Subjt:  ----GAGDAADLGLAVVGGGTDEVDGDVEGGEEACEVEELVQMALRRERDHDDQHRRVVVVVPGG----DSGGNG

A0A5A7NZP4 Exocyst complex component sec3A (Fragment)2.0e-0541.33Show/hide
Query:  MEAVGFGVRERVDGVLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQVGGELVGGSGVRRRAR---ERGDVVKVVEMDEVGAPAAVSGG
        +E+VG  V    D VL+G  ++ VV++D  F       +EGG RAAE    G  G  +V    VGGS VR R R     G   +VVEMD V     V   
Subjt:  MEAVGFGVRERVDGVLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQVGGELVGGSGVRRRAR---ERGDVVKVVEMDEVGAPAAVSGG

Query:  DGAGDAADLGLAVVGGGTDEVDGD-VEGGEEACEVEELVQMALRRERDHD
               +  LAVVGGG +EVDG+   GG+EA E EELV++AL  +  HD
Subjt:  DGAGDAADLGLAVVGGGTDEVDGD-VEGGEEACEVEELVQMALRRERDHD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTGTAGGATTCGGCGTTCGGGAGCGAGTCGACGGCGTCTTGAATGGCCGACGACATCAGCGAGTCGTGGATGACGACAAGTCGTTTCGTTTTTGGGGAAAGGG
AGCGGAGGAAGGCGGCGAGAGGGCGGCGGAGGTACGAGGCCGCGGCGCGGAAGGTTGGGATCAGGTGGGAGGGGAACTTGTGGGCGGCAGCGGGGTCCGGCGCAGGGCAC
GGGAAAGGGGGGACGTCGTCAAAGTCGTGGAAATGGATGAGGTCGGAGCTCCGGCCGCCGTCAGCGGCGGCGACGGCGCCGGAGATGCAGCGGACCTGGGCTTGGCGGTT
GTGGGTGGCGGCACCGACGAAGTGGATGGGGATGTGGAAGGCGGAGAGGAGGCGTGCGAGGTGGAGGAGCTGGTTCAAATGGCCTTGCGCCGGGAGCGGGACCATGACGA
CCAGCACCGGAGGGTGGTCGTAGTTGTTCCCGGCGGTGACAGCGGCGGCAATGGCATGGTTTTGGTTACTCATTTGATGATAGCTTGGAATCCAAAGTACAAGCTGTTTT
CCGTAGGGGTTGTGGGGGACGGGTTTACGACGGAGCTGAACGGCAGCCTTGTGGGGTTGGGTTTGTGGCGGATTCGAGTGAGGCAAGTTGTGGGGGGTGAGGTTGAGTCT
TGGCAAAAACCGAGTGGCAGGGGTTGGGAGCAGCAAAAATCGAACGACATGAGGGTTGGGGTTGGACAACAAGGTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTGTAGGATTCGGCGTTCGGGAGCGAGTCGACGGCGTCTTGAATGGCCGACGACATCAGCGAGTCGTGGATGACGACAAGTCGTTTCGTTTTTGGGGAAAGGG
AGCGGAGGAAGGCGGCGAGAGGGCGGCGGAGGTACGAGGCCGCGGCGCGGAAGGTTGGGATCAGGTGGGAGGGGAACTTGTGGGCGGCAGCGGGGTCCGGCGCAGGGCAC
GGGAAAGGGGGGACGTCGTCAAAGTCGTGGAAATGGATGAGGTCGGAGCTCCGGCCGCCGTCAGCGGCGGCGACGGCGCCGGAGATGCAGCGGACCTGGGCTTGGCGGTT
GTGGGTGGCGGCACCGACGAAGTGGATGGGGATGTGGAAGGCGGAGAGGAGGCGTGCGAGGTGGAGGAGCTGGTTCAAATGGCCTTGCGCCGGGAGCGGGACCATGACGA
CCAGCACCGGAGGGTGGTCGTAGTTGTTCCCGGCGGTGACAGCGGCGGCAATGGCATGGTTTTGGTTACTCATTTGATGATAGCTTGGAATCCAAAGTACAAGCTGTTTT
CCGTAGGGGTTGTGGGGGACGGGTTTACGACGGAGCTGAACGGCAGCCTTGTGGGGTTGGGTTTGTGGCGGATTCGAGTGAGGCAAGTTGTGGGGGGTGAGGTTGAGTCT
TGGCAAAAACCGAGTGGCAGGGGTTGGGAGCAGCAAAAATCGAACGACATGAGGGTTGGGGTTGGACAACAAGGTGGCTAG
Protein sequenceShow/hide protein sequence
MEAVGFGVRERVDGVLNGRRHQRVVDDDKSFRFWGKGAEEGGERAAEVRGRGAEGWDQVGGELVGGSGVRRRARERGDVVKVVEMDEVGAPAAVSGGDGAGDAADLGLAV
VGGGTDEVDGDVEGGEEACEVEELVQMALRRERDHDDQHRRVVVVVPGGDSGGNGMVLVTHLMIAWNPKYKLFSVGVVGDGFTTELNGSLVGLGLWRIRVRQVVGGEVES
WQKPSGRGWEQQKSNDMRVGVGQQGG