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Moc01g16800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g16800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:11240228..11243221
RNA-Seq ExpressionMoc01g16800
SyntenyMoc01g16800
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016020 - membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131678.1 uncharacterized protein LOC111004795 [Momordica charantia]6.5e-1066.1Show/hide
Query:  IDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        ++YLA+VKDQL +FSK E  QIP SQNVN + L RLA   ET L RTVPVEILPEP I+
Subjt:  IDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]1.5e-0965Show/hide
Query:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        M  YL++V++QL  FSK EI+QIP +QNVN D L RLAT YETDL RTVPVEIL  P I+
Subjt:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]2.9e-1065Show/hide
Query:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        M  YL++V++QL  FSK EI QIP +QNV+ D L RLA  YETDL RTVPVEILPEP I+
Subjt:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]3.5e-1166.67Show/hide
Query:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        M  YL++V++QL  FSK EI+QIP +QNVN D+L RLA AYETDL RTVPVEILP P I+
Subjt:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]3.2e-0965Show/hide
Query:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        M  YL++VKDQL  FSK EI+QIP +QNVN D L RLA AY TDL RT+ VEIL EP I+
Subjt:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
TrEMBL top hitse value%identityAlignment
A0A6J1BU48 uncharacterized protein LOC1110047953.2e-1066.1Show/hide
Query:  IDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        ++YLA+VKDQL +FSK E  QIP SQNVN + L RLA   ET L RTVPVEILPEP I+
Subjt:  IDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
A0A6J1DJC7 Ribonuclease H7.0e-1065Show/hide
Query:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        M  YL++V++QL  FSK EI+QIP +QNVN D L RLAT YETDL RTVPVEIL  P I+
Subjt:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
A0A6J1DVC6 Ribonuclease H3.2e-1065Show/hide
Query:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        M  YL++V++QL  FSK EI QIP +QNV+ D L RLA  YETDL RTVPVEILPEP I+
Subjt:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
A0A6J1DZU0 Ribonuclease H1.7e-1166.67Show/hide
Query:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        M  YL++V++QL  FSK EI+QIP +QNVN D+L RLA AYETDL RTVPVEILP P I+
Subjt:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
A0A6J1E1Q5 uncharacterized protein LOC1110256231.6e-0965Show/hide
Query:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
        M  YL++VKDQL  FSK EI+QIP +QNVN D L RLA AY TDL RT+ VEIL EP I+
Subjt:  MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGACTACCTGGCCAAAGTAAAAGATCAACTCGTCGTATTTTCAAAGTGTGAAATCAAACAAATCCCCGATTCTCAAAATGTTAACCTGGATATCTTGGTTCGACT
TGCTACAGCCTACGAAACAGACTTAAAGAGGACTGTTCCAGTTGAGATTCTTCCTGAGCCGATCATACAATGCATGACCGATCTGACTAAATCCAAGGCATGGGAAGGTT
CAAAGCATGCCAAGATCCAGTGCATGACCAGGTCACTACCCCTTGGTTTAACATCCAGCCCACAACAAGATGCCACAGCCCCAGAATGGTCTTTTGATCTTTTTCATATA
GGATCCTTACATTATCCCCATCAAGATGGTAGCTCTTTTAGTCTTACTGATCTTGGCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGACTACCTGGCCAAAGTAAAAGATCAACTCGTCGTATTTTCAAAGTGTGAAATCAAACAAATCCCCGATTCTCAAAATGTTAACCTGGATATCTTGGTTCGACT
TGCTACAGCCTACGAAACAGACTTAAAGAGGACTGTTCCAGTTGAGATTCTTCCTGAGCCGATCATACAATGCATGACCGATCTGACTAAATCCAAGGCATGGGAAGGTT
CAAAGCATGCCAAGATCCAGTGCATGACCAGGTCACTACCCCTTGGTTTAACATCCAGCCCACAACAAGATGCCACAGCCCCAGAATGGTCTTTTGATCTTTTTCATATA
GGATCCTTACATTATCCCCATCAAGATGGTAGCTCTTTTAGTCTTACTGATCTTGGCAGCTAG
Protein sequenceShow/hide protein sequence
MIDYLAKVKDQLVVFSKCEIKQIPDSQNVNLDILVRLATAYETDLKRTVPVEILPEPIIQCMTDLTKSKAWEGSKHAKIQCMTRSLPLGLTSSPQQDATAPEWSFDLFHI
GSLHYPHQDGSSFSLTDLGS