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Moc01g18980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g18980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:13108192..13109777
RNA-Seq ExpressionMoc01g18980
SyntenyMoc01g18980
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143565.1 uncharacterized protein LOC111013434 [Momordica charantia]3.0e-2257.73Show/hide
Query:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKL
        ME+YL K R  L  F+ Y I Q+PRS+NSN+D LA+L SAY+TDL R+VPVEIL   SI +P++MEI+S  P+WM+PIK FL  G VPADP + +K+
Subjt:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKL

XP_022152233.1 uncharacterized protein LOC111020002 [Momordica charantia]5.1e-2259.79Show/hide
Query:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKL
        ME+YL+K R  LTQFE Y + QVPRSENSNAD LA+L SAY+TDL R+VPVEIL   SI  PEVMEI++  P+WMDPI  F + G  P D ++ +K+
Subjt:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKL

XP_022156792.1 uncharacterized protein LOC111023626 [Momordica charantia]1.3e-3381.72Show/hide
Query:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQ
        M+RYLAK RGLL QFEDYVI+QVPRS+NSNAD LARL SAY+TDLPRTVPVEIL ESSI QPE++EI SAQPTW+DPIK FLV+GSV ADPSQ
Subjt:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQ

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]1.0e-3887.76Show/hide
Query:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKLR
        MERYLAK R LL QFEDYVIRQVPRSENSNAD LARL SAYDTDLPRTVPVEIL ESS+ QPE+MEI SAQPTWMDPIK FLV+GSVPADPSQARKLR
Subjt:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKLR

XP_022158215.1 uncharacterized protein LOC111024751 [Momordica charantia]1.2e-2674.44Show/hide
Query:  RGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKLR
        RGL ++   Y   +VPRSENSNAD LA L SAY+TDLPRTVPVEIL ESSI QPE+M+I SA+PTWMDPIK FLV+GS+PADPSQARKLR
Subjt:  RGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKLR

TrEMBL top hitse value%identityAlignment
A0A6J1CP53 Ribonuclease H1.5e-2257.73Show/hide
Query:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKL
        ME+YL K R  L  F+ Y I Q+PRS+NSN+D LA+L SAY+TDL R+VPVEIL   SI +P++MEI+S  P+WM+PIK FL  G VPADP + +K+
Subjt:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKL

A0A6J1DEB3 uncharacterized protein LOC1110200022.5e-2259.79Show/hide
Query:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKL
        ME+YL+K R  LTQFE Y + QVPRSENSNAD LA+L SAY+TDL R+VPVEIL   SI  PEVMEI++  P+WMDPI  F + G  P D ++ +K+
Subjt:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKL

A0A6J1DSX0 uncharacterized protein LOC1110236266.3e-3481.72Show/hide
Query:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQ
        M+RYLAK RGLL QFEDYVI+QVPRS+NSNAD LARL SAY+TDLPRTVPVEIL ESSI QPE++EI SAQPTW+DPIK FLV+GSV ADPSQ
Subjt:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQ

A0A6J1DV78 Ribonuclease H5.7e-2774.44Show/hide
Query:  RGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKLR
        RGL ++   Y   +VPRSENSNAD LA L SAY+TDLPRTVPVEIL ESSI QPE+M+I SA+PTWMDPIK FLV+GS+PADPSQARKLR
Subjt:  RGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKLR

A0A6J1DWM2 Ribonuclease H5.0e-3987.76Show/hide
Query:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKLR
        MERYLAK R LL QFEDYVIRQVPRSENSNAD LARL SAYDTDLPRTVPVEIL ESS+ QPE+MEI SAQPTWMDPIK FLV+GSVPADPSQARKLR
Subjt:  MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGTATCTGGCCAAAACTCGAGGGCTCCTCACCCAGTTTGAGGACTATGTGATTCGACAGGTGCCGAGGTCTGAAAACTCCAACGCCGACAAACTGGCTCGCCT
CACCTCGGCATACGATACCGATCTACCAAGAACGGTTCCAGTTGAAATACTTCCTGAGTCATCCATCCACCAACCTGAGGTGATGGAGATCGAGTCAGCTCAGCCTACAT
GGATGGACCCAATTAAAGGCTTCTTGGTCAGTGGCTCAGTCCCCGCCGATCCGAGCCAGGCCAGGAAGCTCCGACTGTCGCCTACTACTACCAAGCTACGTCAAATGGGG
GCCAAGGAAGACTACGTGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGTATCTGGCCAAAACTCGAGGGCTCCTCACCCAGTTTGAGGACTATGTGATTCGACAGGTGCCGAGGTCTGAAAACTCCAACGCCGACAAACTGGCTCGCCT
CACCTCGGCATACGATACCGATCTACCAAGAACGGTTCCAGTTGAAATACTTCCTGAGTCATCCATCCACCAACCTGAGGTGATGGAGATCGAGTCAGCTCAGCCTACAT
GGATGGACCCAATTAAAGGCTTCTTGGTCAGTGGCTCAGTCCCCGCCGATCCGAGCCAGGCCAGGAAGCTCCGACTGTCGCCTACTACTACCAAGCTACGTCAAATGGGG
GCCAAGGAAGACTACGTGGTATGA
Protein sequenceShow/hide protein sequence
MERYLAKTRGLLTQFEDYVIRQVPRSENSNADKLARLTSAYDTDLPRTVPVEILPESSIHQPEVMEIESAQPTWMDPIKGFLVSGSVPADPSQARKLRLSPTTTKLRQMG
AKEDYVV