CuGenDBv2

Gene ID	Moc01g19780
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	kinetochore protein SPC24 homolog
Genome location	chr1:13813069..13813549
RNA-Seq Expression	Moc01g19780
Synteny	Moc01g19780
Gene Ontology terms	GO:0051983 - regulation of chromosome segregation (biological process)
InterPro domains	IPR044951 - Kinetochore protein SPC24-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022144074.1 uncharacterized protein LOC111013852 isoform X1 [Momordica charantia]

4.5e-49

100

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022144075.1 uncharacterized protein LOC111013852 isoform X2 [Momordica charantia]

6.7e-45

95.33

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVH    +YEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022931907.1 uncharacterized protein LOC111438184 [Cucurbita moschata]

1.4e-37

81.31

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MGDFSGK+NIE+LLSYG+DLVALLKDQ DVQTLNQCL+H  ALQS   DD  NVHSSVQDYEKKIE CR KTEEAKARTVAD EMD+LE+E+EEE+R+EH
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022966574.1 uncharacterized protein LOC111466216 [Cucurbita maxima]

1.6e-38

84.11

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MGDFSGK+NIEELLSYGNDLV LLKDQ DVQTLNQCL+H  ALQS C DDFSNVH  VQDYEKKIE CR KTEEAKARTVAD EMD+LE+E+EEELR+EH
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_023518318.1 uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]

7.9e-38

81.31

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MGDFSGK+NIE+LLSYG+DLVALLKDQ DVQTLNQCL+   ALQS C DD  NVHSSVQDYEKKIE CR KTEEAKARTVAD EMD+LE+E+EEE+R+EH
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CQL9 uncharacterized protein LOC111013852 isoform X2

3.2e-45

95.33

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVH    +YEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X1

2.2e-49

100

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1F034 uncharacterized protein LOC111438184

6.6e-38

81.31

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MGDFSGK+NIE+LLSYG+DLVALLKDQ DVQTLNQCL+H  ALQS   DD  NVHSSVQDYEKKIE CR KTEEAKARTVAD EMD+LE+E+EEE+R+EH
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1HU69 uncharacterized protein LOC111466216

7.8e-39

84.11

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MGDFSGK+NIEELLSYGNDLV LLKDQ DVQTLNQCL+H  ALQS C DDFSNVH  VQDYEKKIE CR KTEEAKARTVAD EMD+LE+E+EEELR+EH
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1IPN8 uncharacterized protein LOC111478320

2.8e-36

80.37

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        M DF+GK NIEE+LSYG+DLVALL DQ DVQTLNQCLEH K LQS C DDFSNV SSVQDYEKKIEACRQKTEEAKA TVAD E+D+LE+EL EEL K +
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

SwissProt top hits

e value

%identity

Alignment

Q67XT3 Kinetochore protein SPC24 homolog

1.7e-14

39.25

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MG+ S   +IE+L+SYG+DL+ LL  +     ++Q  E  KAL   C +DF+ +  S++D + K+ AC++KTEEA +   A+ E++ L++EL+EE+ +E 
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
         L +E+R
Subjt:  LLMEEIR

Arabidopsis top hits

e value

%identity

Alignment

AT3G08880.1 unknown protein

1.2e-15

39.25

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Query:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH
        MG+ S   +IE+L+SYG+DL+ LL  +     ++Q  E  KAL   C +DF+ +  S++D + K+ AC++KTEEA +   A+ E++ L++EL+EE+ +E 
Subjt:  MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEH

Query:  LLMEEIR
         L +E+R
Subjt:  LLMEEIR

AT5G01570.1 unknown protein

5.3e-16

40.4

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Query:  NIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEHLLMEEIR
        N E ++S+G++L+ +L D+K    L Q LE ++A+   CD+DF  +H S+QD +KK++ C++KT+EA +    + E++ L++EL+EEL  E  L EE+R
Subjt:  NIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEHLLMEEIR

Sequences

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CDS sequence

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ATGGGAGATTTCTCAGGAAAGATCAACATTGAGGAGTTGTTATCCTATGGCAATGATCTGGTTGCACTCTTGAAGGACCAAAAGGACGTTCAAACCTTGAATCAATGTCT
CGAACATGTCAAGGCTCTTCAATCTTTTTGCGATGATGATTTCAGTAATGTTCACAGTTCAGTTCAAGATTATGAGAAGAAAATCGAGGCATGCCGGCAGAAAACGGAGG
AGGCGAAAGCGAGAACTGTTGCAGATGCTGAAATGGATGTTCTCGAAGAGGAGCTCGAAGAGGAACTTAGGAAAGAACATTTGCTCATGGAGGAGATTAGATAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGDFSGKINIEELLSYGNDLVALLKDQKDVQTLNQCLEHVKALQSFCDDDFSNVHSSVQDYEKKIEACRQKTEEAKARTVADAEMDVLEEELEEELRKEHLLMEEIR

Moc01g19780 (gene) of Bitter gourd (OHB3-1) v2 genome