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Moc01g20170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g20170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionProtein-serine/threonine phosphatase
Genome locationchr1:14111333..14112864
RNA-Seq ExpressionMoc01g20170
SyntenyMoc01g20170
Gene Ontology termsGO:0070940 - dephosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008420 - RNA polymerase II CTD heptapeptide repeat phosphatase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151519.1 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1 [Momordica charantia]6.8e-2196.43Show/hide
Query:  LKRLLVNLRVLILMRQIMYRSGKLPRDHYPINEQRKKSYMVLNILPPPDSRRMGIP
        + RLLVNLRVLILMRQIMYRSGKLPRDHYPINEQRKKSYMVLNILPPPDSRRMGIP
Subjt:  LKRLLVNLRVLILMRQIMYRSGKLPRDHYPINEQRKKSYMVLNILPPPDSRRMGIP
TrEMBL top hitse value%identityAlignment
A0A6J1DDB2 Protein-serine/threonine phosphatase3.3e-2196.43Show/hide
Query:  LKRLLVNLRVLILMRQIMYRSGKLPRDHYPINEQRKKSYMVLNILPPPDSRRMGIP
        + RLLVNLRVLILMRQIMYRSGKLPRDHYPINEQRKKSYMVLNILPPPDSRRMGIP
Subjt:  LKRLLVNLRVLILMRQIMYRSGKLPRDHYPINEQRKKSYMVLNILPPPDSRRMGIP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAAATAATTTCCAGATGGGGGTTACTGCTCACAACCCTCCTCCTTTCTACTTCATCTCATTGCATCATCGAGATGTGAGCGCCAAAACCAAAACGCTCAAAGG
CAAAGTGGGCTCTGCTTCATGTTTTCCCAATGCTGCCTCTGAATTTTTAAAAAGGCTTCTGGTGAACCTGAGAGTGCTAATTCTGATGCGGCAAATCATGTACAGAAGCG
GCAAACTTCCCCGAGACCATTACCCAATAAACGAGCAAAGGAAGAAGAGCTACATGGTTCTCAATATCTTGCCGCCTCCCGACAGCAGAAGAATGGGCATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAAATAATTTCCAGATGGGGGTTACTGCTCACAACCCTCCTCCTTTCTACTTCATCTCATTGCATCATCGAGATGTGAGCGCCAAAACCAAAACGCTCAAAGG
CAAAGTGGGCTCTGCTTCATGTTTTCCCAATGCTGCCTCTGAATTTTTAAAAAGGCTTCTGGTGAACCTGAGAGTGCTAATTCTGATGCGGCAAATCATGTACAGAAGCG
GCAAACTTCCCCGAGACCATTACCCAATAAACGAGCAAAGGAAGAAGAGCTACATGGTTCTCAATATCTTGCCGCCTCCCGACAGCAGAAGAATGGGCATTCCATAA
Protein sequenceShow/hide protein sequence
MKENNFQMGVTAHNPPPFYFISLHHRDVSAKTKTLKGKVGSASCFPNAASEFLKRLLVNLRVLILMRQIMYRSGKLPRDHYPINEQRKKSYMVLNILPPPDSRRMGIP