; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g20710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g20710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposable element Tf2
Genome locationchr1:14460748..14462010
RNA-Seq ExpressionMoc01g20710
SyntenyMoc01g20710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032923.1 polyprotein [Cucumis melo var. makuwa]6.9e-17874.11Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPATA-AVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N R A+  A +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPATA-AVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWL  YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVE+Q+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+L +KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVND    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP+   DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

KAA0056777.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.3e-18074.82Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N+R A+ AA +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWLQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQ+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVN+    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP++  DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.3e-18074.82Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N+R A+ AA +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWLQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQ+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVN+    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP++  DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

KAA0068172.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.3e-17974.58Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N+R A+ AA +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEP+FDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWLQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQ+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVN+    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP++  DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]1.8e-17874.11Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPATA-AVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N R A+  A +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPATA-AVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWL  YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVE+Q+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+L +KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVND    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP++  DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein3.3e-17874.11Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPATA-AVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N R A+  A +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPATA-AVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWL  YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVE+Q+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+L +KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVND    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP+   DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

A0A5A7UVN1 Retrotransposable element Tf22.1e-18074.82Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N+R A+ AA +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWLQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQ+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVN+    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP++  DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

A0A5A7V6D1 Retrotransposable element Tf21.6e-18074.82Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N+R A+ AA +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWLQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQ+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVN+    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP++  DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

A0A5A7VIK9 Retrotransposable element Tf26.1e-18074.58Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N+R A+ AA +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPAT-AAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEP+FDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWLQ YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVEVQ+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+LR+KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVN+    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP++  DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

A0A5D3DW87 Polyprotein8.8e-17974.11Show/hide
Query:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPATA-AVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL
        MSAENYAMD+QFE VSRR+QGS+QR LTIQ+   SL P PS+ LLRP G TT N R A+  A +SR  IPRNPSS+SQIVRPK+FQPRPPI GYFTKTT+
Subjt:  MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSL-PTPSSTLLRPRGNTTRNRRPATA-AVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTL

Query:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN
        VD  IEPEFDGPSVQEVC QIFP GFN+LPEDL KTRT+YE+ILVDSK AEITHVPD+NDPS+ IYSKLRIFR+LTPS WKQGMFVG++ S  F+P +YN
Subjt:  VDSIIEPEFDGPSVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYN

Query:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDY KAWYIVFWL  YNHSWFVTFCKQAYK HFP WFQ WW YFGLSEEIFPVE+Q+SYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYMKAWYIVFWLQGYNHSWFVTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD
        KALSK+L +KWWEKF+YS+LE +K+KDW K N+HLQD+TRQEDE+FLL KN +MS+LAGA +Q +FNSV+N V V +SD +D   +  S ASVND    D
Subjt:  KALSKALRVKWWEKFDYSYLESDKMKDWLKTNVHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDD

Query:  EEDFDPFDRYDINDPYLDSQP
        + D+DP++  DINDP+LD+QP
Subjt:  EEDFDPFDRYDINDPYLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGAAAATTATGCTATGGATATCCAGTTTGAAACGGTATCCAGGCGTCAGCAAGGTTCTTCCCAAAGAGCCTTGACTATTCAAACAGGCCCTCCAAGCCTTCC
AACCCCTTCAAGTACGTTGTTACGCCCTCGCGGCAATACAACGAGGAATAGGCGCCCTGCTACGGCAGCCGTCACTTCCAGACCAACGATTCCGAGGAACCCTTCCTCGT
TTTCTCAAATAGTTAGGCCGAAGGTTTTTCAGCCAAGGCCTCCAATCACTGGGTATTTCACCAAAACTACCCTAGTAGATTCAATTATTGAACCAGAGTTCGACGGACCT
TCAGTCCAAGAAGTCTGCAAGCAAATATTTCCTCAAGGCTTCAACTACCTGCCAGAGGATCTTCAAAAAACCCGAACTTATTATGAGTTTATTCTAGTAGATTCAAAGTT
TGCAGAAATAACTCATGTTCCAGACAGAAATGATCCTTCTAGGACCATTTACTCAAAGCTCAGGATCTTCCGCATCCTTACCCCTTCCTCTTGGAAACAGGGCATGTTTG
TAGGGAAGAGACTGTCAGTAACCTTCCAACCGCAAACTTACAATTACCGCGACTACATGAAAGCGTGGTATATTGTCTTCTGGTTGCAAGGCTATAACCATTCCTGGTTT
GTGACATTCTGTAAGCAAGCTTACAAGTCTCACTTTCCAATTTGGTTTCAAACATGGTGGACTTACTTTGGACTCTCCGAAGAGATCTTTCCGGTAGAAGTTCAGAAATC
TTACCACCTATTTCAACAAAGTATCTATTCGTCTCCTCTCTCCAAGACGTTTAGATTCGCTTTGTATTTTCAAATACCATGGATCCTTTGCTGGAATTTCCAGCTAGGAC
CCAGTGGAAATTTTAAAGCGTTGAGCAAAGCTCTCCGCGTCAAATGGTGGGAAAAATTCGATTATTCCTACCTAGAATCAGACAAGATGAAGGATTGGTTGAAAACCAAT
GTTCATCTCCAAGACGTCACAAGGCAAGAAGATGAAAGCTTCCTTCTGGCGAAAAATACCATCATGAGTTCACTTGCTGGAGCCGGATCTCAAGCCGACTTCAACTCGGT
CCTCAATACCGTCGCAGTTCAGATTTCTGATCCCGACGATGTCCAGACGGATGTTGACTCATCCGCCTCTGTCAACGATGATGCCGTAGACGACGAAGAAGACTTCGATC
CCTTCGATAGATACGACATCAACGACCCATATCTAGATTCACAGCCCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGAAAATTATGCTATGGATATCCAGTTTGAAACGGTATCCAGGCGTCAGCAAGGTTCTTCCCAAAGAGCCTTGACTATTCAAACAGGCCCTCCAAGCCTTCC
AACCCCTTCAAGTACGTTGTTACGCCCTCGCGGCAATACAACGAGGAATAGGCGCCCTGCTACGGCAGCCGTCACTTCCAGACCAACGATTCCGAGGAACCCTTCCTCGT
TTTCTCAAATAGTTAGGCCGAAGGTTTTTCAGCCAAGGCCTCCAATCACTGGGTATTTCACCAAAACTACCCTAGTAGATTCAATTATTGAACCAGAGTTCGACGGACCT
TCAGTCCAAGAAGTCTGCAAGCAAATATTTCCTCAAGGCTTCAACTACCTGCCAGAGGATCTTCAAAAAACCCGAACTTATTATGAGTTTATTCTAGTAGATTCAAAGTT
TGCAGAAATAACTCATGTTCCAGACAGAAATGATCCTTCTAGGACCATTTACTCAAAGCTCAGGATCTTCCGCATCCTTACCCCTTCCTCTTGGAAACAGGGCATGTTTG
TAGGGAAGAGACTGTCAGTAACCTTCCAACCGCAAACTTACAATTACCGCGACTACATGAAAGCGTGGTATATTGTCTTCTGGTTGCAAGGCTATAACCATTCCTGGTTT
GTGACATTCTGTAAGCAAGCTTACAAGTCTCACTTTCCAATTTGGTTTCAAACATGGTGGACTTACTTTGGACTCTCCGAAGAGATCTTTCCGGTAGAAGTTCAGAAATC
TTACCACCTATTTCAACAAAGTATCTATTCGTCTCCTCTCTCCAAGACGTTTAGATTCGCTTTGTATTTTCAAATACCATGGATCCTTTGCTGGAATTTCCAGCTAGGAC
CCAGTGGAAATTTTAAAGCGTTGAGCAAAGCTCTCCGCGTCAAATGGTGGGAAAAATTCGATTATTCCTACCTAGAATCAGACAAGATGAAGGATTGGTTGAAAACCAAT
GTTCATCTCCAAGACGTCACAAGGCAAGAAGATGAAAGCTTCCTTCTGGCGAAAAATACCATCATGAGTTCACTTGCTGGAGCCGGATCTCAAGCCGACTTCAACTCGGT
CCTCAATACCGTCGCAGTTCAGATTTCTGATCCCGACGATGTCCAGACGGATGTTGACTCATCCGCCTCTGTCAACGATGATGCCGTAGACGACGAAGAAGACTTCGATC
CCTTCGATAGATACGACATCAACGACCCATATCTAGATTCACAGCCCAGCTGA
Protein sequenceShow/hide protein sequence
MSAENYAMDIQFETVSRRQQGSSQRALTIQTGPPSLPTPSSTLLRPRGNTTRNRRPATAAVTSRPTIPRNPSSFSQIVRPKVFQPRPPITGYFTKTTLVDSIIEPEFDGP
SVQEVCKQIFPQGFNYLPEDLQKTRTYYEFILVDSKFAEITHVPDRNDPSRTIYSKLRIFRILTPSSWKQGMFVGKRLSVTFQPQTYNYRDYMKAWYIVFWLQGYNHSWF
VTFCKQAYKSHFPIWFQTWWTYFGLSEEIFPVEVQKSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNFKALSKALRVKWWEKFDYSYLESDKMKDWLKTN
VHLQDVTRQEDESFLLAKNTIMSSLAGAGSQADFNSVLNTVAVQISDPDDVQTDVDSSASVNDDAVDDEEDFDPFDRYDINDPYLDSQPS