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Moc01g20760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g20760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionBeta-galactosidase
Genome locationchr1:14479343..14480742
RNA-Seq ExpressionMoc01g20760
SyntenyMoc01g20760
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595353.1 hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2059.06Show/hide
Query:  MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
        MA FLF+LFIFA+A L+S  V               AE PSARKLG H SAAAVS  SSPSEAP+SE+KV                +HK+ D SIAGGGV
Subjt:  MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV

Query:  ILGGLATTFLVAIICYIRATRRSNSEV
        ILGGLATTF VAIICYIRAT+R NSEV
Subjt:  ILGGLATTFLVAIICYIRATRRSNSEV

KAG6603622.1 hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2463.85Show/hide
Query:  MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGD--HQHHNHKASDKSIAGG
        MA FLF+LFIFANA L SV V     GAAP P  T AE PS RKLGKH S A V   SSPSEAPRSE KV   +   T        H +HK+ DKS+AGG
Subjt:  MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGD--HQHHNHKASDKSIAGG

Query:  GVILGGLATTFLVAIICYIRATRRSNSEVN
        GVILGGLATTFLVAI+CYIRATRR  SEV+
Subjt:  GVILGGLATTFLVAIICYIRATRRSNSEVN

KGN54308.1 hypothetical protein Csa_017945 [Cucumis sativus]6.1e-2461.07Show/hide
Query:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFANA  +S+        AA +P  T AE+PS RKLGKH+S A   + SSP+EAPRS MKVQ TS A       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVA+ICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

XP_008448528.1 PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo]1.5e-2564.12Show/hide
Query:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFANAF +S+        AA +P  T AE+PS RKLGKH+S A   + SSP EAPRSEMKVQ TSAA       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVAIICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

XP_022151558.1 uncharacterized protein LOC111019472 [Momordica charantia]2.5e-57100Show/hide
Query:  MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
        MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
Subjt:  MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV

Query:  ILGGLATTFLVAIICYIRATRRSNSEV
        ILGGLATTFLVAIICYIRATRRSNSEV
Subjt:  ILGGLATTFLVAIICYIRATRRSNSEV

TrEMBL top hitse value%identityAlignment
A0A0A0KXQ0 Uncharacterized protein3.0e-2461.07Show/hide
Query:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFANA  +S+        AA +P  T AE+PS RKLGKH+S A   + SSP+EAPRS MKVQ TS A       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVA+ICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

A0A1S3BJV8 uncharacterized protein LOC1034906757.1e-2664.12Show/hide
Query:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFANAF +S+        AA +P  T AE+PS RKLGKH+S A   + SSP EAPRSEMKVQ TSAA       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVAIICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

A0A5A7TSM2 Uncharacterized protein7.1e-2664.12Show/hide
Query:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFANAF +S+        AA +P  T AE+PS RKLGKH+S A   + SSP EAPRSEMKVQ TSAA       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVAIICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

A0A6J1DCH7 uncharacterized protein LOC1110194721.2e-57100Show/hide
Query:  MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
        MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
Subjt:  MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV

Query:  ILGGLATTFLVAIICYIRATRRSNSEV
        ILGGLATTFLVAIICYIRATRRSNSEV
Subjt:  ILGGLATTFLVAIICYIRATRRSNSEV

A0A6J1DS30 Beta-galactosidase5.6e-1590.38Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP
        VVLLVLGVLAS SLANAANVTYDHRALVI+GKRRVLVSGSIHYPRSTP   P
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP

SwissProt top hitse value%identityAlignment
A2X2H7 Beta-galactosidase 41.5e-0962.75Show/hide
Query:  LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKPG
        L+   + AS  +ANAA V+YD R+LVING+RR+L+SGSIHYPRSTP   PG
Subjt:  LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKPG

Q10NX8 Beta-galactosidase 61.1e-1067.27Show/hide
Query:  LLVLGVLASFSL----ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKPG
        LL+L V+   SL    + AANVTYDHRA+VI+G RRVLVSGSIHYPRSTP   PG
Subjt:  LLVLGVLASFSL----ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKPG

Q5Z7L0 Beta-galactosidase 94.0e-1062.96Show/hide
Query:  GGVVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP
        GG V  +L ++A+ ++ANAA VTYDHR+L ING+RR+L+SGSIHYPRSTP   P
Subjt:  GGVVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP

Q6Z6K4 Beta-galactosidase 41.5e-0962.75Show/hide
Query:  LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKPG
        L+   + AS  +ANAA V+YD R+LVING+RR+L+SGSIHYPRSTP   PG
Subjt:  LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKPG

Q9SCV4 Beta-galactosidase 83.6e-1165.38Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP
        ++LL+L ++ +   A AANVTYDHRALVI+GKR+VL+SGSIHYPRSTP   P
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP

Arabidopsis top hitse value%identityAlignment
AT2G28470.1 beta-galactosidase 82.6e-1265.38Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP
        ++LL+L ++ +   A AANVTYDHRALVI+GKR+VL+SGSIHYPRSTP   P
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP

AT2G28470.2 beta-galactosidase 82.6e-1265.38Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP
        ++LL+L ++ +   A AANVTYDHRALVI+GKR+VL+SGSIHYPRSTP   P
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP

AT3G09280.1 unknown protein4.1e-1043.82Show/hide
Query:  STGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGVILGGLATTFLVAIICYIRATRR
        S+ AE P+ RKLG+H             E P  E   +A   +       + H+H   ++S+AGGGVILGGLATTFLV + CYIRATR+
Subjt:  STGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGVILGGLATTFLVAIICYIRATRR

AT3G52840.1 beta-galactosidase 22.4e-1058.82Show/hide
Query:  LVLGVLASFSLANA--ANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP
        ++L +L   SL ++  A VTYDH+AL+ING+RR+L+SGSIHYPRSTP   P
Subjt:  LVLGVLASFSLANA--ANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKP

AT5G56870.1 beta-galactosidase 44.6e-0951.92Show/hide
Query:  VLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKPG
        + L +    S S    A+V+YD +A++ING+RR+L+SGSIHYPRSTP   PG
Subjt:  VLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGATTTCTATTCATTCTCTTCATCTTCGCCAATGCATTTCTGAATTCCGTCGTCGTCGTCGGTGCCGAGTTCGGAGCCGCTCCGTCGCCGATCTCGACCGGAGC
CGAAACGCCTTCCGCTAGAAAGCTCGGGAAGCACCGGAGTGCGGCGGCTGTTTCTTCCGGCTCGAGTCCGTCTGAAGCGCCGCGGAGCGAAATGAAAGTTCAGGCGACCT
CGGCGGCGGCGACGAACGGAGGAGATCATCAGCATCACAATCACAAGGCGAGCGATAAGTCAATCGCCGGCGGCGGCGTGATTTTGGGTGGACTCGCCACCACGTTTCTG
GTGGCGATTATCTGCTACATTAGGGCAACGCGGAGATCGAACTCAGAAGTGAATTTTGGATCAGATTCGAGCAATGAGGGGAGTTCAATTTGCGGTGGTGTTGTTTTGTT
GGTTCTCGGCGTTTTAGCCTCCTTCTCGCTTGCCAATGCCGCCAATGTGACGTATGATCACCGGGCGTTGGTGATCAACGGCAAGCGGAGAGTCTTGGTTTCTGGATCTA
TACACTATCCTCGCAGTACCCCGAGTTCGAAACCAGGTACATTTTGCGAATTCTTCGATCCAAGAATCGCGTCTTGGTTCTATGCGAATTCTTGGAAGATATTTGAGAAA
TCTGTTCACCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGATTTCTATTCATTCTCTTCATCTTCGCCAATGCATTTCTGAATTCCGTCGTCGTCGTCGGTGCCGAGTTCGGAGCCGCTCCGTCGCCGATCTCGACCGGAGC
CGAAACGCCTTCCGCTAGAAAGCTCGGGAAGCACCGGAGTGCGGCGGCTGTTTCTTCCGGCTCGAGTCCGTCTGAAGCGCCGCGGAGCGAAATGAAAGTTCAGGCGACCT
CGGCGGCGGCGACGAACGGAGGAGATCATCAGCATCACAATCACAAGGCGAGCGATAAGTCAATCGCCGGCGGCGGCGTGATTTTGGGTGGACTCGCCACCACGTTTCTG
GTGGCGATTATCTGCTACATTAGGGCAACGCGGAGATCGAACTCAGAAGTGAATTTTGGATCAGATTCGAGCAATGAGGGGAGTTCAATTTGCGGTGGTGTTGTTTTGTT
GGTTCTCGGCGTTTTAGCCTCCTTCTCGCTTGCCAATGCCGCCAATGTGACGTATGATCACCGGGCGTTGGTGATCAACGGCAAGCGGAGAGTCTTGGTTTCTGGATCTA
TACACTATCCTCGCAGTACCCCGAGTTCGAAACCAGGTACATTTTGCGAATTCTTCGATCCAAGAATCGCGTCTTGGTTCTATGCGAATTCTTGGAAGATATTTGAGAAA
TCTGTTCACCGTTGA
Protein sequenceShow/hide protein sequence
MARFLFILFIFANAFLNSVVVVGAEFGAAPSPISTGAETPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGVILGGLATTFL
VAIICYIRATRRSNSEVNFGSDSSNEGSSICGGVVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPSSKPGTFCEFFDPRIASWFYANSWKIFEK
SVHR