; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g21760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g21760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr1:15127684..15128639
RNA-Seq ExpressionMoc01g21760
SyntenyMoc01g21760
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603691.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-11876.06Show/hide
Query:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
        MTVRLLHMLF    +SALL  HGFHIV SIRL SY+K  T PT NLPKPP+LL+LISPKGN AS+SRQTHLRLI+DFLRTD+D+CR QTLS GF +    
Subjt:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV

Query:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
         SKDSS V DQE ES HW   L AGRF+FDANDISS +S C SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+N+A +VF+EMPVRN+VSW
Subjt:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW

Query:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        TAIIAGFAQEWQ+ MCLELFQ+MRRM L+PNEFTFATILSA  GSGALGVGRS HCQT KMGFDSHVHIANALISM C    L+
Subjt:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

XP_022143730.1 pentatricopeptide repeat-containing protein At2g37320 [Momordica charantia]6.4e-15997.89Show/hide
Query:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
        MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
Subjt:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV

Query:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
        SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
Subjt:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW

Query:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISM C +  L+
Subjt:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

XP_022949850.1 pentatricopeptide repeat-containing protein At2g37320 [Cucurbita moschata]5.5e-11875.7Show/hide
Query:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
        MTVRLLHMLF    +SALL  HGFHIV SIRL SY+K  T PT NLPKPP+LL+LISPKGN AS+SRQTHLRLI+DFLRTD+D+CR QTLS GF +    
Subjt:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV

Query:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
         SKDSS V DQE ES HW   L AGRF+FDANDISS +S C SQRN RGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+N+A +VF+EMPVRN+VSW
Subjt:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW

Query:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        TAIIAGFAQEWQ+ MCLELFQ+MRRM L+PNEFTFATILSA  GSGALGVGRS HCQT KMGFDSHVHIANALISM C    L+
Subjt:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

XP_022977771.1 pentatricopeptide repeat-containing protein At2g37320 [Cucurbita maxima]2.9e-11976.06Show/hide
Query:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
        MTVRLLHMLF   Q+SALL  HGFHIV SIRL SY+K  T PT NLPKPP+LL+LISPKGN AS+SRQTHLRLI+DFL+TD+D+CR QTLS GF +    
Subjt:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV

Query:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
         SKDSS V DQE ES HWD  L AGRF+FDANDISS +S C SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+ +A +VF+EMPVRN+VSW
Subjt:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW

Query:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        TAIIAGFAQEWQ+ MCLELFQ+MRRM L+PNEFTFATILSA  GSGALGVGRS HCQT KMGFDSHVHIANALISM C    L+
Subjt:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

XP_023544680.1 pentatricopeptide repeat-containing protein At2g37320 [Cucurbita pepo subsp. pepo]7.9e-11774.65Show/hide
Query:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
        MTVRLLH LF   ++SALL  HGFHIV SIRL SY+K  T PT +LPKPP+LL+LISPKGN AS+SRQTHLRLI+DFL+TD+D+CR QTLS GF +    
Subjt:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV

Query:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
         SKDSS V DQE ES HW   L AGRF+FDANDISS +S C SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+ +A +VF+EMPVRN+VSW
Subjt:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW

Query:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        TA+IAGFAQEWQ+ MCLELFQQM+RM LRPNEFTFATILSA  GSGALGVGRS HCQT KMGFDSHVHIANALISM C    L+
Subjt:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

TrEMBL top hitse value%identityAlignment
A0A0A0KX36 Uncharacterized protein1.3e-10970.71Show/hide
Query:  LLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFVSSKD
        LLHMLF   Q+SA  + HGF+++ SIR  S +K  THPT NLPKPP+LL+LISPKG+V+ +SRQTHLRLIQDFL+TD+ +CR QTL  G  +     SKD
Subjt:  LLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFVSSKD

Query:  SSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAII
        SS V DQE ES HWD+   AGRFKF+ANDISSV+S C+SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKCGEL+NAY+VF+EMPVRN+VSWTAII
Subjt:  SSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAII

Query:  AGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        AGFA EWQ+ MCLELFQ+M+RM L+PNEFTF TIL+A  GSGALGVGRS HCQT+KMGF S++H+ANALISM C    L+
Subjt:  AGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

A0A1S3BGK7 pentatricopeptide repeat-containing protein At2g373204.5e-11070.42Show/hide
Query:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
        M   LLHMLFA  Q+SA  + HGF++V S+R  S +K  THPT NLPKP +LL+LISPKG+V+ +SRQTHLRLIQDFL+TD D+CR QTLS GF +    
Subjt:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV

Query:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
         SKDSS V DQE ES HWD+   AGRFKF ANDISSV+S C+SQRNLRGG+QYHSVAIRTGFI NVY+GSSL+SLYGKCGEL+NAY++F+EMPVRN+VSW
Subjt:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW

Query:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        TAIIAGFA EWQ+ MCLELF++M+RM L+PNEFTF TIL+A  GSGALGVGRS HCQT KMGF S++HIANALISM C    L+
Subjt:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

A0A6J1CPL2 pentatricopeptide repeat-containing protein At2g373203.1e-15997.89Show/hide
Query:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
        MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
Subjt:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV

Query:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
        SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
Subjt:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW

Query:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISM C +  L+
Subjt:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

A0A6J1GDY6 pentatricopeptide repeat-containing protein At2g373202.7e-11875.7Show/hide
Query:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
        MTVRLLHMLF    +SALL  HGFHIV SIRL SY+K  T PT NLPKPP+LL+LISPKGN AS+SRQTHLRLI+DFLRTD+D+CR QTLS GF +    
Subjt:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV

Query:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
         SKDSS V DQE ES HW   L AGRF+FDANDISS +S C SQRN RGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+N+A +VF+EMPVRN+VSW
Subjt:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW

Query:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        TAIIAGFAQEWQ+ MCLELFQ+MRRM L+PNEFTFATILSA  GSGALGVGRS HCQT KMGFDSHVHIANALISM C    L+
Subjt:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

A0A6J1IKW6 pentatricopeptide repeat-containing protein At2g373201.4e-11976.06Show/hide
Query:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV
        MTVRLLHMLF   Q+SALL  HGFHIV SIRL SY+K  T PT NLPKPP+LL+LISPKGN AS+SRQTHLRLI+DFL+TD+D+CR QTLS GF +    
Subjt:  MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFV

Query:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW
         SKDSS V DQE ES HWD  L AGRF+FDANDISS +S C SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+ +A +VF+EMPVRN+VSW
Subjt:  SSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSW

Query:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS
        TAIIAGFAQEWQ+ MCLELFQ+MRRM L+PNEFTFATILSA  GSGALGVGRS HCQT KMGFDSHVHIANALISM C    L+
Subjt:  TAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLS

SwissProt top hitse value%identityAlignment
Q0WNP3 Pentatricopeptide repeat-containing protein At4g18520, chloroplastic1.4e-2337.24Show/hide
Query:  ISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEF
        + S++ +CS ++ LR G Q HS+ ++     +V++G+SL+ +Y KCGE+++  KVF+ M  RN V+WT+IIA  A+E      + LF+ M+R  L  N  
Subjt:  ISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEF

Query:  TFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLC
        T  +IL A    GAL +G+  H Q IK   + +V+I + L+ + C
Subjt:  TFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLC

Q9LFI1 Pentatricopeptide repeat-containing protein At3g53360, mitochondrial2.1e-2432.77Show/hide
Query:  VSSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVS
        ++S   S  + + LE+  +D   +   FK       S++ +CSS R+L  G + H   + +    +  + + ++S+YGKCG L +A +VF+ MP RN+VS
Subjt:  VSSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVS

Query:  WTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISM
        +T++I G++Q  Q    + L+ +M + +L P++F F +I+ A   S  +G+G+  H Q IK+   SH+   NALI+M
Subjt:  WTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISM

Q9LIC3 Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial1.0e-2637.24Show/hide
Query:  SVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTF
        +++++C  +R LR G + H+  I+T ++P  Y+ + L+  YGKC  L +A KV +EMP +N+VSWTA+I+ ++Q       L +F +M R + +PNEFTF
Subjt:  SVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTF

Query:  ATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPA
        AT+L++   +  LG+G+  H   +K  +DSH+ + ++L+ M   A
Subjt:  ATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPA

Q9SIT7 Pentatricopeptide repeat-containing protein At2g136004.8e-2435.1Show/hide
Query:  FKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRM
        F  +    +SV+S+CS   ++  G+Q HS+  ++ F+ +VYIGS+L+ +Y KCG +N+A +VF+EM  RN+VSW ++I  F Q       L++FQ M   
Subjt:  FKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRM

Query:  ELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMG-FDSHVHIANALISM
         + P+E T A+++SA     A+ VG+  H + +K     + + ++NA + M
Subjt:  ELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMG-FDSHVHIANALISM

Q9ZUT4 Pentatricopeptide repeat-containing protein At2g373206.4e-5346.93Show/hide
Query:  KLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFVSSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGG
        ++L++IS K    S +RQ H   +Q+F +TD+ + R Q +S  F       +  SS + +  LE S     ++   + FDA  +SS V SC   R+ R G
Subjt:  KLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFVSSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGG

Query:  IQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGV
          +H +A++ GFI +VY+GSSL+ LY   GE+ NAYKVFEEMP RN+VSWTA+I+GFAQEW++ +CL+L+ +MR+    PN++TF  +LSA  GSGALG 
Subjt:  IQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGV

Query:  GRSFHCQTIKMGFDSHVHIANALISMLC
        GRS HCQT+ MG  S++HI+N+LISM C
Subjt:  GRSFHCQTIKMGFDSHVHIANALISMLC

Arabidopsis top hitse value%identityAlignment
AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein3.4e-2535.1Show/hide
Query:  FKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRM
        F  +    +SV+S+CS   ++  G+Q HS+  ++ F+ +VYIGS+L+ +Y KCG +N+A +VF+EM  RN+VSW ++I  F Q       L++FQ M   
Subjt:  FKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRM

Query:  ELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMG-FDSHVHIANALISM
         + P+E T A+++SA     A+ VG+  H + +K     + + ++NA + M
Subjt:  ELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMG-FDSHVHIANALISM

AT2G37320.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.6e-5446.93Show/hide
Query:  KLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFVSSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGG
        ++L++IS K    S +RQ H   +Q+F +TD+ + R Q +S  F       +  SS + +  LE S     ++   + FDA  +SS V SC   R+ R G
Subjt:  KLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFVSSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGG

Query:  IQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGV
          +H +A++ GFI +VY+GSSL+ LY   GE+ NAYKVFEEMP RN+VSWTA+I+GFAQEW++ +CL+L+ +MR+    PN++TF  +LSA  GSGALG 
Subjt:  IQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGV

Query:  GRSFHCQTIKMGFDSHVHIANALISMLC
        GRS HCQT+ MG  S++HI+N+LISM C
Subjt:  GRSFHCQTIKMGFDSHVHIANALISMLC

AT3G13770.1 Pentatricopeptide repeat (PPR) superfamily protein7.3e-2837.24Show/hide
Query:  SVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTF
        +++++C  +R LR G + H+  I+T ++P  Y+ + L+  YGKC  L +A KV +EMP +N+VSWTA+I+ ++Q       L +F +M R + +PNEFTF
Subjt:  SVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTF

Query:  ATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPA
        AT+L++   +  LG+G+  H   +K  +DSH+ + ++L+ M   A
Subjt:  ATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPA

AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.5e-2532.77Show/hide
Query:  VSSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVS
        ++S   S  + + LE+  +D   +   FK       S++ +CSS R+L  G + H   + +    +  + + ++S+YGKCG L +A +VF+ MP RN+VS
Subjt:  VSSKDSSCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVS

Query:  WTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISM
        +T++I G++Q  Q    + L+ +M + +L P++F F +I+ A   S  +G+G+  H Q IK+   SH+   NALI+M
Subjt:  WTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISM

AT4G18520.1 Pentatricopeptide repeat (PPR) superfamily protein9.9e-2537.24Show/hide
Query:  ISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEF
        + S++ +CS ++ LR G Q HS+ ++     +V++G+SL+ +Y KCGE+++  KVF+ M  RN V+WT+IIA  A+E      + LF+ M+R  L  N  
Subjt:  ISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEF

Query:  TFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLC
        T  +IL A    GAL +G+  H Q IK   + +V+I + L+ + C
Subjt:  TFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTTCGTCTTCTTCATATGCTCTTCGCAGAGCCTCAAAATTCTGCACTTCTTCATGGACATGGCTTCCACATAGTAGCCTCCATTAGGCTCCTCTCATAC
TACAAACCCAAGACCCATCCAACCAAGAACTTACCCAAACCTCCGAAACTTTTGGAGCTCATTTCTCCGAAGGGAAATGTCGCCTCTAAAAGTCGCCAAACCCAT
CTTCGGCTCATACAGGACTTTTTACGAACAGATACGGATAAATGTCGACCCCAAACCCTCTCCCACGGTTTCGTTGCTCCTCCATTCGTTTCATCTAAGGATTCC
TCCTGTGTTTTTGATCAAGAACTTGAATCGAGTCATTGGGATCTTCATTTGCGCGCTGGAAGATTTAAATTCGATGCGAACGATATATCCAGCGTTGTGAGTTCG
TGCAGTTCTCAGCGTAATCTCCGCGGTGGAATTCAATACCATTCTGTGGCGATACGGACTGGGTTTATCCCCAATGTGTATATAGGAAGTTCACTGATAAGTTTG
TATGGGAAGTGCGGGGAGTTGAATAACGCATATAAGGTGTTTGAAGAAATGCCTGTGAGAAATATTGTGTCATGGACAGCCATTATTGCTGGGTTTGCTCAAGAA
TGGCAGATTGGTATGTGCTTGGAGCTCTTCCAACAGATGAGAAGAATGGAATTGCGACCCAATGAGTTTACTTTTGCCACCATATTGAGCGCTTACCCTGGCAGT
GGAGCTCTTGGAGTAGGGAGAAGTTTTCATTGCCAAACAATCAAAATGGGCTTTGATTCTCATGTCCATATTGCAAATGCTCTGATCTCAATGTTATGCCCAGCA
TGGACTCTCTCTGCAAGCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTTCGTCTTCTTCATATGCTCTTCGCAGAGCCTCAAAATTCTGCACTTCTTCATGGACATGGCTTCCACATAGTAGCCTCCATTAGGCTCCTCTCATAC
TACAAACCCAAGACCCATCCAACCAAGAACTTACCCAAACCTCCGAAACTTTTGGAGCTCATTTCTCCGAAGGGAAATGTCGCCTCTAAAAGTCGCCAAACCCAT
CTTCGGCTCATACAGGACTTTTTACGAACAGATACGGATAAATGTCGACCCCAAACCCTCTCCCACGGTTTCGTTGCTCCTCCATTCGTTTCATCTAAGGATTCC
TCCTGTGTTTTTGATCAAGAACTTGAATCGAGTCATTGGGATCTTCATTTGCGCGCTGGAAGATTTAAATTCGATGCGAACGATATATCCAGCGTTGTGAGTTCG
TGCAGTTCTCAGCGTAATCTCCGCGGTGGAATTCAATACCATTCTGTGGCGATACGGACTGGGTTTATCCCCAATGTGTATATAGGAAGTTCACTGATAAGTTTG
TATGGGAAGTGCGGGGAGTTGAATAACGCATATAAGGTGTTTGAAGAAATGCCTGTGAGAAATATTGTGTCATGGACAGCCATTATTGCTGGGTTTGCTCAAGAA
TGGCAGATTGGTATGTGCTTGGAGCTCTTCCAACAGATGAGAAGAATGGAATTGCGACCCAATGAGTTTACTTTTGCCACCATATTGAGCGCTTACCCTGGCAGT
GGAGCTCTTGGAGTAGGGAGAAGTTTTCATTGCCAAACAATCAAAATGGGCTTTGATTCTCATGTCCATATTGCAAATGCTCTGATCTCAATGTTATGCCCAGCA
TGGACTCTCTCTGCAAGCCATTGA
Protein sequenceShow/hide protein sequence
MTVRLLHMLFAEPQNSALLHGHGFHIVASIRLLSYYKPKTHPTKNLPKPPKLLELISPKGNVASKSRQTHLRLIQDFLRTDTDKCRPQTLSHGFVAPPFVSSKDS
SCVFDQELESSHWDLHLRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQE
WQIGMCLELFQQMRRMELRPNEFTFATILSAYPGSGALGVGRSFHCQTIKMGFDSHVHIANALISMLCPAWTLSASH