; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g21780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g21780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc finger CCHC domain-containing protein 10
Genome locationchr1:15134754..15135822
RNA-Seq ExpressionMoc01g21780
SyntenyMoc01g21780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008447301.1 PREDICTED: uncharacterized protein LOC103489769 [Cucumis melo]2.9e-7065.77Show/hide
Query:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
        MM+ CKED  WSG KM+  +GL TL+CLRGRLLAERQASRSAKEEAE MG+K+++LENQIRKETELRNKAEKRL+LLIKKLESLN AS SV    ST+SE
Subjt:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE

Query:  ISTNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYID
        ISTNSS +KETE QE +SE       ENQ +K + +I   KQ DE K N+N PD+ NS PN+ESPNN   DP   S+I  ++DQSFSVE+KER  +HYID
Subjt:  ISTNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYID

Query:  NPVASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM
        N   SVPGA P A+ E+ AMK    I ERA +VHD +KH+RGNVQSSFERRNHMKAI+SM
Subjt:  NPVASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM

XP_022143889.1 uncharacterized protein LOC111013694 isoform X1 [Momordica charantia]2.8e-126100Show/hide
Query:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
        MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
Subjt:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE

Query:  ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVP
        ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVP
Subjt:  ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVP

Query:  GAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM
        GAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM
Subjt:  GAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM

XP_022143893.1 uncharacterized protein LOC111013694 isoform X2 [Momordica charantia]3.0e-83100Show/hide
Query:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
        MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
Subjt:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE

Query:  ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS
        ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS
Subjt:  ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS

XP_038881375.1 uncharacterized protein LOC120072916 isoform X1 [Benincasa hispida]1.5e-7171.89Show/hide
Query:  SGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKET
        SG KME G+GL TL+CLRGRLLAERQASRSAKEEAE MG+K+++LENQIRKETELRNKAEKRLKLLIKKLESLNIAS SV SE ST SEISTNSS  KET
Subjt:  SGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKET

Query:  EDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVP
        E QESRSE       E Q EK V DI   KQRDE K N+NAPD+ NSS N+ES NNS  DPHR SQI + +D+SFSVE + +E+EHYIDN VASVPGA P
Subjt:  EDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVP

Query:  AASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM
        AA+ E+RAMK    I ERA +VHD +KH+RGNVQSSFE RNHMKAIM +
Subjt:  AASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM

XP_038881376.1 uncharacterized protein LOC120072916 isoform X2 [Benincasa hispida]8.3e-7872.2Show/hide
Query:  MSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEI
        M+NCKEDR WSG KME G+GL TL+CLRGRLLAERQASRSAKEEAE MG+K+++LENQIRKETELRNKAEKRLKLLIKKLESLNIAS SV SE ST SEI
Subjt:  MSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEI

Query:  STNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDN
        STNSS  KETE QESRSE       E Q EK V DI   KQRDE K N+NAPD+ NSS N+ES NNS  DPHR SQI + +D+SFSVE + +E+EHYIDN
Subjt:  STNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDN

Query:  PVASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM
         VASVPGA PAA+ E+RAMK    I ERA +VHD +KH+RGNVQSSFE RNHMKAIM +
Subjt:  PVASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM

TrEMBL top hitse value%identityAlignment
A0A1S3BHR6 uncharacterized protein LOC1034897691.4e-7065.77Show/hide
Query:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
        MM+ CKED  WSG KM+  +GL TL+CLRGRLLAERQASRSAKEEAE MG+K+++LENQIRKETELRNKAEKRL+LLIKKLESLN AS SV    ST+SE
Subjt:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE

Query:  ISTNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYID
        ISTNSS +KETE QE +SE       ENQ +K + +I   KQ DE K N+N PD+ NS PN+ESPNN   DP   S+I  ++DQSFSVE+KER  +HYID
Subjt:  ISTNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYID

Query:  NPVASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM
        N   SVPGA P A+ E+ AMK    I ERA +VHD +KH+RGNVQSSFERRNHMKAI+SM
Subjt:  NPVASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM

A0A5A7TZE9 Zinc finger CCHC domain-containing protein 101.4e-7065.77Show/hide
Query:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
        MM+ CKED  WSG KM+  +GL TL+CLRGRLLAERQASRSAKEEAE MG+K+++LENQIRKETELRNKAEKRL+LLIKKLESLN AS SV    ST+SE
Subjt:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE

Query:  ISTNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYID
        ISTNSS +KETE QE +SE       ENQ +K + +I   KQ DE K N+N PD+ NS PN+ESPNN   DP   S+I  ++DQSFSVE+KER  +HYID
Subjt:  ISTNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYID

Query:  NPVASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM
        N   SVPGA P A+ E+ AMK    I ERA +VHD +KH+RGNVQSSFERRNHMKAI+SM
Subjt:  NPVASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM

A0A6J1CRU4 uncharacterized protein LOC111013694 isoform X21.4e-83100Show/hide
Query:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
        MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
Subjt:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE

Query:  ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS
        ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS
Subjt:  ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS

A0A6J1CS61 uncharacterized protein LOC111013694 isoform X11.4e-126100Show/hide
Query:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
        MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE
Subjt:  MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSE

Query:  ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVP
        ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVP
Subjt:  ISTNSSATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVP

Query:  GAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM
        GAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM
Subjt:  GAVPAASRESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM

A0A6J1IB17 uncharacterized protein LOC1114712732.4e-7066.92Show/hide
Query:  SNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEIS
        + CKED  WSGKKME GEGL TL+CLRGRLLAERQASRSAKEEAE MG+K+IELENQIRKETE RNKAE+RLKLL+KKLESLNIAS SV SENS S+EIS
Subjt:  SNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEIS

Query:  TNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNP
        TNSSATKET+ QESRSE        N+ EK    I       ++K NQ +PD+ NSSPN++SPNNS TDPHR  QIS+ + QSFS E KERE EHYID  
Subjt:  TNSSATKETEDQESRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNP

Query:  VASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKH--VRGNVQSSFERRNHMKAIMSM
         AS PGA PAA++    MK    I ER  DV D VK   +RGNVQ  FERRN MKAIMSM
Subjt:  VASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKH--VRGNVQSSFERRNHMKAIMSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37300.1 unknown protein7.4e-1650Show/hide
Query:  EGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNS----SATKETE
        E  EG  T++CLRGRLLAERQ SRSAKEEAE + +KM ELE  +++E  LR KAEKRLKLL+KKLE +     S  SE S+SSE+S  S    SA+KE E
Subjt:  EGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNS----SATKETE

Query:  DQESRS---EENQSEKAVPDIAAPKQRD
        ++   S   +E +++ A  ++A+ ++ D
Subjt:  DQESRS---EENQSEKAVPDIAAPKQRD

AT2G37300.2 unknown protein2.5e-1647.59Show/hide
Query:  NCKEDRPWSGKKM----EGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSS
        N K    ++ KKM    E  EG  T++CLRGRLLAERQ SRSAKEEAE + +KM ELE  +++E  LR KAEKRLKLL+KKLE +     S  SE S+SS
Subjt:  NCKEDRPWSGKKM----EGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSS

Query:  EISTNS----SATKETEDQESRS---EENQSEKAVPDIAAPKQRD
        E+S  S    SA+KE E++   S   +E +++ A  ++A+ ++ D
Subjt:  EISTNS----SATKETEDQESRS---EENQSEKAVPDIAAPKQRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGTAATTGCAAGGAAGACAGACCCTGGAGTGGAAAGAAAATGGAAGGAGGGGAGGGTTTGATAACTTTAGACTGCTTAAGAGGAAGATTACTTGCAGAG
AGACAAGCTTCAAGGTCAGCCAAAGAGGAGGCAGAGTTCATGGGGAAGAAGATGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTAAGGAACAAAGCT
GAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCCTCAACATTGCTTCAATATCAGTGATCTCAGAGAACTCAACTTCATCAGAAATTTCCACAAACTCT
TCAGCCACAAAAGAAACAGAAGATCAAGAATCGAGATCAGAAGAAAATCAAAGCGAGAAAGCTGTTCCAGATATCGCCGCACCAAAACAGCGCGATGAGGATAAA
ACTAATCAGAATGCTCCAGATCAAACCAATTCAAGCCCTAACACCGAATCTCCCAACAATTCCTGCACCGATCCCCACCGATACTCTCAAATCTCCCGGAGCAGA
GATCAAAGTTTTTCAGTAGAATTAAAGGAGAGAGAGAAGGAGCATTACATAGATAATCCGGTAGCGTCGGTCCCCGGAGCGGTGCCGGCGGCGAGTAGAGAGAGC
AGAGCGATGAAGCCGACGGCAATAATCCAAGAAAGAGCGAGAGATGTTCACGATGGTGTGAAGCACGTCAGAGGAAATGTCCAAAGCTCATTCGAGAGAAGAAAT
CACATGAAAGCCATAATGAGTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGTAATTGCAAGGAAGACAGACCCTGGAGTGGAAAGAAAATGGAAGGAGGGGAGGGTTTGATAACTTTAGACTGCTTAAGAGGAAGATTACTTGCAGAG
AGACAAGCTTCAAGGTCAGCCAAAGAGGAGGCAGAGTTCATGGGGAAGAAGATGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTAAGGAACAAAGCT
GAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCCTCAACATTGCTTCAATATCAGTGATCTCAGAGAACTCAACTTCATCAGAAATTTCCACAAACTCT
TCAGCCACAAAAGAAACAGAAGATCAAGAATCGAGATCAGAAGAAAATCAAAGCGAGAAAGCTGTTCCAGATATCGCCGCACCAAAACAGCGCGATGAGGATAAA
ACTAATCAGAATGCTCCAGATCAAACCAATTCAAGCCCTAACACCGAATCTCCCAACAATTCCTGCACCGATCCCCACCGATACTCTCAAATCTCCCGGAGCAGA
GATCAAAGTTTTTCAGTAGAATTAAAGGAGAGAGAGAAGGAGCATTACATAGATAATCCGGTAGCGTCGGTCCCCGGAGCGGTGCCGGCGGCGAGTAGAGAGAGC
AGAGCGATGAAGCCGACGGCAATAATCCAAGAAAGAGCGAGAGATGTTCACGATGGTGTGAAGCACGTCAGAGGAAATGTCCAAAGCTCATTCGAGAGAAGAAAT
CACATGAAAGCCATAATGAGTATGTAA
Protein sequenceShow/hide protein sequence
MMSNCKEDRPWSGKKMEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNS
SATKETEDQESRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASRES
RAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMSM