CuGenDBv2

Gene ID	Moc01g22320
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	thylakoid lumenal 15.0 kDa protein 2, chloroplastic
Genome location	chr1:15534891..15536555
RNA-Seq Expression	Moc01g22320
Synteny	Moc01g22320
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004143269.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis sativus]

2.8e-104

83.05

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MA +HLHHHLPS S+S   ++ SPPLC       +SSRFSPPS P  +   T F++ LLH P KS SF LSGALALGI LSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQE+RLKQEIA+IEKDTGYKLRVLAQNYPVTPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGED+SIESAVMAIS+CLREPVG NNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

XP_022143943.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Momordica charantia]

6.1e-131

100

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

XP_022979097.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita maxima]

2.4e-103

83.05

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MA +HLHH LPS S+S P   ASPP+     S+ ASSRFSPPS    +  LT FTN LLH PPKS SFALS  LALG+ALSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQE RLKQEIA+IEKDTGYKLRVLAQN+PVTPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGE+ SIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

XP_023543502.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita pepo subsp. pepo]

1.5e-105

84.32

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MA +HLHH LPS S+S P   ASPP+     S+ ASSRFSPPS    + NLTGFTN LLH PPKS SFALS  LALG+ALSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQE+RLKQEIA+IEKDTGYKLRVLAQNYPVTPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGE+ SIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

XP_038881208.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Benincasa hispida]

2.6e-105

83.47

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MA +HLHHHLPS S+S    + SPP+        +S RFSPPSF   +   T F+NWLLHFP KS SFA SGALALGIALSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQE+RLKQEIA IEKDTGYKLRVLAQNYP+TPGLA+KDFW+VDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGED SIESAVMAISNCLREPVGPNNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KH91 Uncharacterized protein

1.4e-104

83.05

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MA +HLHHHLPS S+S   ++ SPPLC       +SSRFSPPS P  +   T F++ LLH P KS SF LSGALALGI LSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQE+RLKQEIA+IEKDTGYKLRVLAQNYPVTPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGED+SIESAVMAIS+CLREPVG NNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

A0A1S3CH24 thylakoid lumenal 15.0 kDa protein 2, chloroplastic

3.4e-103

82.63

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MA +HLHHHLPS S+S   +++S PLC       +SSRFSPPS P  +   T F + LLH P K  SF LSGALALGI LSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQE+RLKQEIA+IEKDTGYKLRVLAQNYP TPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGED+SIESAVMAIS+CLREPVGPNNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

A0A6J1CRY9 thylakoid lumenal 15.0 kDa protein 2, chloroplastic

2.9e-131

100

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

A0A6J1EJL7 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

1.7e-102

82.2

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MA +HLHH LPS S+S P   ASPP+     S+ A SRFSPPS    +   T FTN LLH PPKS SFALS  LALG+ALSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQE RLKQEIA+IEK+TGYKLRVLAQNYPVTPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGE+ SIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

A0A6J1IMV5 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

1.2e-103

83.05

Show/hide

Query:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK
        MA +HLHH LPS S+S P   ASPP+     S+ ASSRFSPPS    +  LT FTN LLH PPKS SFALS  LALG+ALSGVGFADAKVGVNKPELLPK
Subjt:  MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPK

Query:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQE RLKQEIA+IEKDTGYKLRVLAQN+PVTPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGE+ SIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  FYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK

SwissProt top hits

e value

%identity

Alignment

Q9LVV5 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic

1.2e-86

78.54

Show/hide

Query:  VSASSRFSPPSFPTINLNLTG-FTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEVRLKQEIAEIEKDT
        VS+SSR S        L  +G   NW+  F  KS S   SGALALG++LSGVGFADAKVGVNKPELLPKEFTSVIDVA FLS+GQE R+ QEIA +EKDT
Subjt:  VSASSRFSPPSFPTINLNLTG-FTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEVRLKQEIAEIEKDT

Query:  GYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDTSIESAVMAISNCLREPVGPNN
        G+KLRVLAQNYPVTPGLA+KDFWQVDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGED SIE+AVMAIS+CLREPVG NN
Subjt:  GYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDTSIESAVMAISNCLREPVGPNN

Query:  CSEIK
        C+EI+
Subjt:  CSEIK

Arabidopsis top hits

e value

%identity

Alignment

AT5G52970.1 thylakoid lumen 15.0 kDa protein

8.8e-88

78.54

Show/hide

Query:  VSASSRFSPPSFPTINLNLTG-FTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEVRLKQEIAEIEKDT
        VS+SSR S        L  +G   NW+  F  KS S   SGALALG++LSGVGFADAKVGVNKPELLPKEFTSVIDVA FLS+GQE R+ QEIA +EKDT
Subjt:  VSASSRFSPPSFPTINLNLTG-FTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEVRLKQEIAEIEKDT

Query:  GYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDTSIESAVMAISNCLREPVGPNN
        G+KLRVLAQNYPVTPGLA+KDFWQVDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGED SIE+AVMAIS+CLREPVG NN
Subjt:  GYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDTSIESAVMAISNCLREPVGPNN

Query:  CSEIK
        C+EI+
Subjt:  CSEIK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTCTATTCACCTTCATCACCATCTTCCCTCTGCATCTATCTCCCTTCCCAAAGCCAAAGCTTCACCGCCCCTTTGCGCACCACCACTCTCCGTCTCCGCATCATC
TCGCTTCTCTCCGCCATCATTTCCGACAATAAACCTAAATTTAACTGGTTTCACCAACTGGCTTCTCCATTTTCCTCCAAAATCTTTCAGTTTCGCGCTCTCTGGTGCTC
TTGCGCTCGGAATAGCTCTCTCTGGAGTTGGATTTGCGGACGCCAAAGTTGGGGTTAACAAACCAGAACTGCTTCCTAAGGAGTTCACCTCTGTCATTGATGTCGCCGGG
TTTCTATCTGATGGCCAGGAAGTTAGGCTCAAACAAGAAATAGCCGAGATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCGCAAAATTATCCTGTGACACCAGG
GCTGGCAGTCAAAGATTTTTGGCAAGTGGATGATAGAACAATCGTGTTTGTTGCCGATCCTACATTTGGTAACATATTGAACTTCAACGTCGGAGCGACTGTGGATTTGG
ACATTCCACGGAGCTTTTGGAGCCGTTTGGCCGGGAAATACGGAAACATATTTTACTGGAAAGAGAAGGGTGAAGATACATCTATTGAATCAGCTGTCATGGCTATATCT
AATTGCTTGAGAGAACCAGTCGGCCCAAATAACTGTTCCGAGATAAAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLHFPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPKEFTSVIDVAG
FLSDGQEVRLKQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDTSIESAVMAIS
NCLREPVGPNNCSEIK

Moc01g22320 (gene) of Bitter gourd (OHB3-1) v2 genome