; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g22440 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g22440
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSIL1
Genome locationchr1:15609895..15612749
RNA-Seq ExpressionMoc01g22440
SyntenyMoc01g22440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058925.1 RNA-binding protein 2 [Cucumis melo var. makuwa]1.3e-0631.33Show/hide
Query:  ALKPISGKIVTFSGLCYGVLGKSPFHFFGSLSTLTDMEAHEVTALPALLGDVRFVHGRKDIRSWAPNPSLDFTCSSFLQLRIAPSLSLTPRFFPPSGRVS
        AL  I GK+   S L +       F  FG   TL      +V  L +LL    F +GR+D+R W+ +P   F+C      R++  L L            
Subjt:  ALKPISGKIVTFSGLCYGVLGKSPFHFFGSLSTLTDMEAHEVTALPALLGDVRFVHGRKDIRSWAPNPSLDFTCSSFLQLRIAPSLSLTPRFFPPSGRVS

Query:  WASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKG
             D +  +E+ +L  P   +G  LW  C  AILW +W ERN+R+F+G
Subjt:  WASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKG

RVW59472.1 hypothetical protein CK203_104153 [Vitis vinifera]1.1e-0525.88Show/hide
Query:  SGKCPWKVLSSIFLTFLFLALSRMALKPISGKIVTF---------------SGLC----------YGVLGKS-PFHF-FGSLSTLTDMEAHEVTALPALL
        S +CPWK ++ +F    F   +R+ +   +G+ + F                 LC          Y +LG   PF + F    +LTD E  ++  L   +
Subjt:  SGKCPWKVLSSIFLTFLFLALSRMALKPISGKIVTF---------------SGLC----------YGVLGKS-PFHF-FGSLSTLTDMEAHEVTALPALL

Query:  GDVRFVHGRKDIRSWAPNPSLDFTCSSFLQL--RIAPSLSLTPRFFPPSGRVSWASNRDCKASLEEVVLFPPF--QDKGLLLWQTCFFAILWGVWIERNK
          +       D RSW+   S  FT  SF     +++ S  L P       ++ W   +     +   + +  F    +GL+LWQ    A++W VW ERN 
Subjt:  GDVRFVHGRKDIRSWAPNPSLDFTCSSFLQL--RIAPSLSLTPRFFPPSGRVSWASNRDCKASLEEVVLFPPF--QDKGLLLWQTCFFAILWGVWIERNK

Query:  RIFKGVERFWER-WELMRLHLAASVMGF
        RIF+   R  E  W+   +H  AS   F
Subjt:  RIFKGVERFWER-WELMRLHLAASVMGF

TYK19563.1 uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]4.9e-0643.48Show/hide
Query:  VSWASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER-FWERWELMRLHLA
        VS A  RD +A  E  +L PPF++KG  LW     AI+W +W ERN R+F+G +R   E   L+R H++
Subjt:  VSWASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER-FWERWELMRLHLA

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]1.1e-1838.19Show/hide
Query:  GSLSTLTDMEAHEVTALPALLGDVRFVHGRKDIRSWAPNPSLDFTCSSFLQLRIAPSLS--------------LTPRF-----FPPSGRVSWASNRDCKA
        G   +LTD E+ E+ AL  LL  V    GR+D+R W PNP   F+CSSF Q+ I+PS S              +TP F          ++ +   +  + 
Subjt:  GSLSTLTDMEAHEVTALPALLGDVRFVHGRKDIRSWAPNPSLDFTCSSFLQLRIAPSLS--------------LTPRF-----FPPSGRVSWASNRDCKA

Query:  SLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER
             V+ PPF+++G  LWQ CF A LWG+W+ERN R+F+GVE+
Subjt:  SLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER

XP_038906584.1 uncharacterized protein LOC120092540 isoform X2 [Benincasa hispida]1.1e-0568.57Show/hide
Query:  PFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER
        PF DKG +LW T FFA+LWG+WIER+ RIF+ VER
Subjt:  PFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909766.9e-0641.79Show/hide
Query:  WASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER-FWERWELMRLHLA
        +A +RD +  +EE +L  P  ++G  LW+ C  AILW +W E N+R+F GVER   E W ++R H++
Subjt:  WASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER-FWERWELMRLHLA

A0A438FHN3 Uncharacterized protein5.3e-0625.88Show/hide
Query:  SGKCPWKVLSSIFLTFLFLALSRMALKPISGKIVTF---------------SGLC----------YGVLGKS-PFHF-FGSLSTLTDMEAHEVTALPALL
        S +CPWK ++ +F    F   +R+ +   +G+ + F                 LC          Y +LG   PF + F    +LTD E  ++  L   +
Subjt:  SGKCPWKVLSSIFLTFLFLALSRMALKPISGKIVTF---------------SGLC----------YGVLGKS-PFHF-FGSLSTLTDMEAHEVTALPALL

Query:  GDVRFVHGRKDIRSWAPNPSLDFTCSSFLQL--RIAPSLSLTPRFFPPSGRVSWASNRDCKASLEEVVLFPPF--QDKGLLLWQTCFFAILWGVWIERNK
          +       D RSW+   S  FT  SF     +++ S  L P       ++ W   +     +   + +  F    +GL+LWQ    A++W VW ERN 
Subjt:  GDVRFVHGRKDIRSWAPNPSLDFTCSSFLQL--RIAPSLSLTPRFFPPSGRVSWASNRDCKASLEEVVLFPPF--QDKGLLLWQTCFFAILWGVWIERNK

Query:  RIFKGVERFWER-WELMRLHLAASVMGF
        RIF+   R  E  W+   +H  AS   F
Subjt:  RIFKGVERFWER-WELMRLHLAASVMGF

A0A5A7UZB5 RNA-binding protein 26.2e-0731.33Show/hide
Query:  ALKPISGKIVTFSGLCYGVLGKSPFHFFGSLSTLTDMEAHEVTALPALLGDVRFVHGRKDIRSWAPNPSLDFTCSSFLQLRIAPSLSLTPRFFPPSGRVS
        AL  I GK+   S L +       F  FG   TL      +V  L +LL    F +GR+D+R W+ +P   F+C      R++  L L            
Subjt:  ALKPISGKIVTFSGLCYGVLGKSPFHFFGSLSTLTDMEAHEVTALPALLGDVRFVHGRKDIRSWAPNPSLDFTCSSFLQLRIAPSLSLTPRFFPPSGRVS

Query:  WASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKG
             D +  +E+ +L  P   +G  LW  C  AILW +W ERN+R+F+G
Subjt:  WASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKG

A0A5D3D7T2 Uncharacterized protein2.4e-0643.48Show/hide
Query:  VSWASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER-FWERWELMRLHLA
        VS A  RD +A  E  +L PPF++KG  LW     AI+W +W ERN R+F+G +R   E   L+R H++
Subjt:  VSWASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER-FWERWELMRLHLA

A0A6J1DFI2 uncharacterized protein LOC1110196245.4e-1938.19Show/hide
Query:  GSLSTLTDMEAHEVTALPALLGDVRFVHGRKDIRSWAPNPSLDFTCSSFLQLRIAPSLS--------------LTPRF-----FPPSGRVSWASNRDCKA
        G   +LTD E+ E+ AL  LL  V    GR+D+R W PNP   F+CSSF Q+ I+PS S              +TP F          ++ +   +  + 
Subjt:  GSLSTLTDMEAHEVTALPALLGDVRFVHGRKDIRSWAPNPSLDFTCSSFLQLRIAPSLS--------------LTPRF-----FPPSGRVSWASNRDCKA

Query:  SLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER
             V+ PPF+++G  LWQ CF A LWG+W+ERN R+F+GVE+
Subjt:  SLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACCCACACCTGTTCCAAGGCTCGGATCTGGGAGACATCAAGAATTTTTGGTAGTGGTCCTGGGATTTCTGGCAAGTGCCCCTGGAAAGTTCTCTCTTCTATCTT
TCTCACCTTTTTGTTTCTTGCTCTATCTAGGATGGCACTGAAACCTATTTCTGGAAAGATTGTTACATTCAGTGGCCTCTGTTATGGGGTATTGGGAAAATCCCCCTTCC
ATTTCTTTGGGTCTCTTTCGACCTTGACGGATATGGAAGCACATGAGGTAACTGCATTGCCTGCTTTGTTAGGTGACGTCCGTTTCGTGCACGGGAGGAAAGACATTAGG
TCTTGGGCGCCAAACCCGTCTTTGGATTTCACTTGCAGTTCCTTTCTTCAACTTCGAATTGCTCCATCGCTCTCCTTAACACCTCGTTTTTTCCCTCCCTCTGGAAGGGT
CTCTTGGGCGAGTAATAGGGATTGTAAGGCTTCATTAGAGGAGGTGGTGTTGTTCCCGCCCTTTCAGGATAAAGGACTCCTGTTATGGCAGACTTGTTTTTTTGCCATCT
TGTGGGGTGTTTGGATTGAAAGGAATAAAAGAATTTTCAAGGGAGTTGAGAGGTTTTGGGAGAGGTGGGAGCTGATGAGGTTGCATTTAGCGGCCTCTGTTATGGGGTTT
TGGGAAAATCCTCCTTCCATTTCTTTAGGCCTCTATCAATCCTTGACGGATAGGGAAGAACAAGAGATTACTGTATTGTTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACCCACACCTGTTCCAAGGCTCGGATCTGGGAGACATCAAGAATTTTTGGTAGTGGTCCTGGGATTTCTGGCAAGTGCCCCTGGAAAGTTCTCTCTTCTATCTT
TCTCACCTTTTTGTTTCTTGCTCTATCTAGGATGGCACTGAAACCTATTTCTGGAAAGATTGTTACATTCAGTGGCCTCTGTTATGGGGTATTGGGAAAATCCCCCTTCC
ATTTCTTTGGGTCTCTTTCGACCTTGACGGATATGGAAGCACATGAGGTAACTGCATTGCCTGCTTTGTTAGGTGACGTCCGTTTCGTGCACGGGAGGAAAGACATTAGG
TCTTGGGCGCCAAACCCGTCTTTGGATTTCACTTGCAGTTCCTTTCTTCAACTTCGAATTGCTCCATCGCTCTCCTTAACACCTCGTTTTTTCCCTCCCTCTGGAAGGGT
CTCTTGGGCGAGTAATAGGGATTGTAAGGCTTCATTAGAGGAGGTGGTGTTGTTCCCGCCCTTTCAGGATAAAGGACTCCTGTTATGGCAGACTTGTTTTTTTGCCATCT
TGTGGGGTGTTTGGATTGAAAGGAATAAAAGAATTTTCAAGGGAGTTGAGAGGTTTTGGGAGAGGTGGGAGCTGATGAGGTTGCATTTAGCGGCCTCTGTTATGGGGTTT
TGGGAAAATCCTCCTTCCATTTCTTTAGGCCTCTATCAATCCTTGACGGATAGGGAAGAACAAGAGATTACTGTATTGTTTGCTTAG
Protein sequenceShow/hide protein sequence
MDTHTCSKARIWETSRIFGSGPGISGKCPWKVLSSIFLTFLFLALSRMALKPISGKIVTFSGLCYGVLGKSPFHFFGSLSTLTDMEAHEVTALPALLGDVRFVHGRKDIR
SWAPNPSLDFTCSSFLQLRIAPSLSLTPRFFPPSGRVSWASNRDCKASLEEVVLFPPFQDKGLLLWQTCFFAILWGVWIERNKRIFKGVERFWERWELMRLHLAASVMGF
WENPPSISLGLYQSLTDREEQEITVLFA