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Moc01g22490 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g22490
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiontetraspanin-8
Genome locationchr1:15632262..15633489
RNA-Seq ExpressionMoc01g22490
SyntenyMoc01g22490
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587789.1 Tetraspanin-8, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0665.12Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM
        +DGKVCT FN KF RD+V Q   EH SS Q GCCKPADE  F+
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM

XP_022933577.1 tetraspanin-8 [Cucurbita moschata]1.4e-0665.12Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM
        +DGKVCT FN KF RD+V Q   EH SS Q GCCKPADE  F+
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM

XP_023007578.1 tetraspanin-8 [Cucurbita maxima]4.1e-0662.79Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM
        +DGKVCT FN KF RD+V +   EH SS Q GCCKPADE  F+
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM

XP_023531770.1 tetraspanin-8 [Cucurbita pepo subsp. pepo]1.4e-0665.12Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM
        +DGKVCT FN KF RD+V Q   EH SS Q GCCKPADE  F+
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM

XP_038880175.1 tetraspanin-8-like [Benincasa hispida]1.9e-0646.97Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFMITTTKLASIASRAKGSLGTELVL
        +DGKVC+ FN K+ RD+V+QF  EH SS Q GCCKPADE +F        S  S +  S   +  L
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFMITTTKLASIASRAKGSLGTELVL

TrEMBL top hitse value%identityAlignment
A0A1S3B8W0 tetraspanin-8-like2.2e-0556.52Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFMITT
        +DGKVC  FN  F  ++V+QF  EH SS Q GCCKPADE  F   T
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFMITT

A0A5A7SV27 Tetraspanin-8-like2.2e-0556.52Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFMITT
        +DGKVC  FN  F  ++V+QF  EH SS Q GCCKPADE  F   T
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFMITT

A0A6J1BZZ8 tetraspanin-8-like4.9e-0561.9Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQF
        +DGKVCT F+ KF   +V+QF  EH SS Q GCCKPADE  F
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQF

A0A6J1F057 tetraspanin-86.9e-0765.12Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM
        +DGKVCT FN KF RD+V Q   EH SS Q GCCKPADE  F+
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM

A0A6J1L815 tetraspanin-82.0e-0662.79Show/hide
Query:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM
        +DGKVCT FN KF RD+V +   EH SS Q GCCKPADE  F+
Subjt:  MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCAAGGTCTGCACCGGCTTCAACACTAAATTCGGCCGTGATTCCGTCCAGCAATTCTGCAACGAACACTCGTCTTCCACTCAGTATGGTTGCTGCAAGCCGGC
AGATGAGGGCCAATTCATGATAACAACCACGAAACTTGCTTCAATTGCCAGTCGTGCAAAGGGGTCTCTGGGCACGGAACTTGTTCTTGTGGAAGATTTATTCCCAGCTC
ATCTCTCTAGTGCGGAAAAGGATCCCAGATATGTTTTGCTGCAAAAACAGAGTTATTATGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCAAGGTCTGCACCGGCTTCAACACTAAATTCGGCCGTGATTCCGTCCAGCAATTCTGCAACGAACACTCGTCTTCCACTCAGTATGGTTGCTGCAAGCCGGC
AGATGAGGGCCAATTCATGATAACAACCACGAAACTTGCTTCAATTGCCAGTCGTGCAAAGGGGTCTCTGGGCACGGAACTTGTTCTTGTGGAAGATTTATTCCCAGCTC
ATCTCTCTAGTGCGGAAAAGGATCCCAGATATGTTTTGCTGCAAAAACAGAGTTATTATGACTAG
Protein sequenceShow/hide protein sequence
MDGKVCTGFNTKFGRDSVQQFCNEHSSSTQYGCCKPADEGQFMITTTKLASIASRAKGSLGTELVLVEDLFPAHLSSAEKDPRYVLLQKQSYYD