; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g22690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g22690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionHistone H2B
Genome locationchr1:15780761..15781159
RNA-Seq ExpressionMoc01g22690
SyntenyMoc01g22690
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000558 - Histone H2B
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQQ07827.1 putative histone H2B.3 [Prunus yedoensis var. nudiflora]7.5e-5492.54Show/hide
Query:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASS--EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT
        MAP+AEKKPAEK PAEKKPRAEKKLPK+A+S  EKKKKK KKSVET+K+YLFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT
Subjt:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASS--EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT

Query:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

XP_011024306.1 PREDICTED: probable histone H2B.1 [Populus euphratica]7.5e-5489.93Show/hide
Query:  MAPRAEKKP-------AEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAP+AEKKP       AEKAPAEKKPRAEKKLPK+  SEKKKKK KKSVETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPRAEKKP-------AEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

XP_022143720.1 probable histone H2B.3 [Momordica charantia]7.7e-59100Show/hide
Query:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR
        MAPRAEKKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR
Subjt:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR

Query:  EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

XP_034928728.1 probable histone H2B.1 [Populus alba]5.7e-5489.93Show/hide
Query:  MAPRAEKKP-------AEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAP+AEKKP       AEKAPAEKKPRAEKKLPK+ +SEKKKKK KKSVETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPRAEKKP-------AEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

XP_038882933.1 probable histone H2B.3 [Benincasa hispida]8.8e-5593.48Show/hide
Query:  MAPR-----AEKKPAEKAPA-EKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK
        MAP+     AEKKPAEKAPA EKKPRAEKKLPKDASSEKKKKKMKKSVETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK
Subjt:  MAPR-----AEKKPAEKAPA-EKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK

Query:  PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

TrEMBL top hitse value%identityAlignment
A0A314YN83 Histone H2B3.6e-5492.54Show/hide
Query:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASS--EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT
        MAP+AEKKPAEK PAEKKPRAEKKLPK+A+S  EKKKKK KKSVET+K+YLFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT
Subjt:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASS--EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT

Query:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

A0A314YS07 Histone H2B4.7e-5492.54Show/hide
Query:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASS--EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT
        MAP+AEKKPAEK PAEKKPRAEKKLPK+A+S  EKKKKK KKSVETYK+YLFKVLKQVHPDIGIS KAMGIMNSFI+DIFEKLAQESSRLARYNKKPTIT
Subjt:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASS--EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT

Query:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

A0A4U5R0H5 Histone H2B2.8e-5489.93Show/hide
Query:  MAPRAEKKP-------AEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAP+AEKKP       AEKAPAEKKPRAEKKLPK+ +SEKKKKK KKSVETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
Subjt:  MAPRAEKKP-------AEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

A0A5N5GII4 Histone H2B3.6e-5491.79Show/hide
Query:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDA--SSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT
        MAP+AEKKPAEKAPAEKKPRAEKKLPK+A  + +KKKK+ KKSVETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT
Subjt:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDA--SSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT

Query:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

A0A6J1CPK2 Histone H2B3.7e-59100Show/hide
Query:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR
        MAPRAEKKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR
Subjt:  MAPRAEKKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR

Query:  EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

SwissProt top hitse value%identityAlignment
O22582 Histone H2B1.1e-5281.63Show/hide
Query:  MAPRAEKKP------------AEKAPAEKKPRAEKKLPKD---ASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQES
        MAP+AEKKP            AEKAPAEKKP+A KKLPK+   A+ +KKKK++KKSVETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+
Subjt:  MAPRAEKKP------------AEKAPAEKKPRAEKKLPKD---ASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQES

Query:  SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

O65821 Histone H2B.11.5e-5283.1Show/hide
Query:  MAPRAEKKPAEK----------APAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLAR
        MAP+A KKPAEK           PAEKKP+A KKLPKDA ++KKKKK KKSVETYK+Y+FKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR
Subjt:  MAPRAEKKPAEK----------APAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLAR

Query:  YNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
         NKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Subjt:  YNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Q1S9I9 Probable histone H2B.11.5e-5281.76Show/hide
Query:  MAPRAEKKP-------------AEKAPAEKKPRAEKKLPKD---ASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE
        MAP+ EKKP             AEKAPAEKKP+A KKLPK+   A+ EKKKK+ KKSVETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE
Subjt:  MAPRAEKKP-------------AEKAPAEKKPRAEKKLPKD---ASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE

Query:  SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Q1SU99 Probable histone H2B.34.1e-5591.41Show/hide
Query:  AEKKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
        AEKKPAEKAPAEKKP+AEKK+ K+ SS+KKKK+ KKSVETYK+Y+FKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Subjt:  AEKKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT

Query:  AVRLVLPGELAKHAVSEGTKAVTKFTSS
        AVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  AVRLVLPGELAKHAVSEGTKAVTKFTSS

Q9LFF6 Histone H2B.81.5e-5284.06Show/hide
Query:  MAPRAE------KKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK
        MAP+A       KKPAEKAPAEK P+AEKK+ K+  SEKKKKK KK++ETYK+Y+FKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKK
Subjt:  MAPRAE------KKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK

Query:  PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        PTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS
Subjt:  PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Arabidopsis top hitse value%identityAlignment
AT1G07790.1 Histone superfamily protein4.0e-5379.73Show/hide
Query:  MAPRAEKKP----------------AEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE
        MAPRAEKKP                AEKAPAEKKP+A KKLP   + +KKKK+ KK+VETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE
Subjt:  MAPRAEKKP----------------AEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE

Query:  SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        SS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT2G28720.1 Histone superfamily protein1.1e-5285.82Show/hide
Query:  APRAEKKPAEKAPAEKKPRAEKKLPKDASS---EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT
        AP  E+K AEKAPAEKKP+A KKLPK+A +   EKKKK++KKS ETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTIT
Subjt:  APRAEKKPAEKAPAEKKPRAEKKLPKDASS---EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT

Query:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT2G37470.1 Histone superfamily protein5.2e-5385.51Show/hide
Query:  MAPR------AEKKPAEKAPAEKKPRAEKKLPKDA-SSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK
        MAP+      AEKKPA KAPAEK P+AEKK+ KDA  SEKKKKK KKSVETYK+Y+FKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQESS+LARYNK
Subjt:  MAPR------AEKKPAEKAPAEKKPRAEKKLPKDA-SSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNK

Query:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
        KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Subjt:  KPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS

AT3G46030.1 Histone superfamily protein6.7e-5382.07Show/hide
Query:  MAPRAEKKP-----------AEKAPAEKKPRAEKKLPKDASS--EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSR
        MAP+AEKKP           AEKAPAEKKP+A KKLPK+A +  +KKKK  KKSVETYK+Y+FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+
Subjt:  MAPRAEKKP-----------AEKAPAEKKPRAEKKLPKDASS--EKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSR

Query:  LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT3G53650.1 Histone superfamily protein1.0e-5384.06Show/hide
Query:  MAPRAE------KKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK
        MAP+A       KKPAEKAPAEK P+AEKK+ K+  SEKKKKK KK++ETYK+Y+FKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKK
Subjt:  MAPRAE------KKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKK

Query:  PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        PTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS
Subjt:  PTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAAGAGCAGAGAAGAAGCCAGCGGAGAAGGCGCCAGCCGAAAAGAAGCCTCGAGCGGAGAAGAAGCTCCCGAAAGACGCATCATCTGAAAAGAAGAAGAAGAA
GATGAAGAAGAGCGTGGAGACCTACAAGCTTTACCTCTTCAAGGTCTTGAAGCAGGTACATCCCGATATCGGAATTTCTAGCAAGGCCATGGGAATTATGAACAGTTTTA
TCAACGACATTTTCGAGAAGTTGGCTCAGGAGTCGTCGCGATTGGCTAGGTATAACAAGAAGCCGACGATCACCTCAAGGGAGATCCAAACGGCCGTGCGGCTGGTGCTT
CCAGGTGAGCTTGCGAAGCACGCCGTATCCGAGGGAACGAAGGCGGTAACCAAATTCACCAGCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCAAGAGCAGAGAAGAAGCCAGCGGAGAAGGCGCCAGCCGAAAAGAAGCCTCGAGCGGAGAAGAAGCTCCCGAAAGACGCATCATCTGAAAAGAAGAAGAAGAA
GATGAAGAAGAGCGTGGAGACCTACAAGCTTTACCTCTTCAAGGTCTTGAAGCAGGTACATCCCGATATCGGAATTTCTAGCAAGGCCATGGGAATTATGAACAGTTTTA
TCAACGACATTTTCGAGAAGTTGGCTCAGGAGTCGTCGCGATTGGCTAGGTATAACAAGAAGCCGACGATCACCTCAAGGGAGATCCAAACGGCCGTGCGGCTGGTGCTT
CCAGGTGAGCTTGCGAAGCACGCCGTATCCGAGGGAACGAAGGCGGTAACCAAATTCACCAGCTCTTAG
Protein sequenceShow/hide protein sequence
MAPRAEKKPAEKAPAEKKPRAEKKLPKDASSEKKKKKMKKSVETYKLYLFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL
PGELAKHAVSEGTKAVTKFTSS