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Moc01g23080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g23080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description60S acidic ribosomal protein P2-like protein
Genome locationchr1:16121659..16123857
RNA-Seq ExpressionMoc01g23080
SyntenyMoc01g23080
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS74099.1 hypothetical protein M569_00658, partial [Genlisea aurea]4.2e-2768.14Show/hide
Query:  KKMKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAK
        + MKVVAAYLLAVLGGN+SPTA D++ IL SVGA+A+DE+IELLLSQVKGKDI E++A GREK+AS+PA G  A AV     GGG    A AA AAAEAK
Subjt:  KKMKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAK

Query:  KEEKKEDVEDSDD
        KEEK E+ E+SDD
Subjt:  KEEKKEDVEDSDD

KAB1225394.1 60S acidic ribosomal protein P2-4 [Morella rubra]2.7e-2668.47Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKV+AAYLLAVLGGNT P+A D++ IL SVGAE ED+KIELLLS+VKGKDI +++A GREK+AS+P+ G VA AV   T GGG A+AA AA AAAE KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EK E+ E+SDD
Subjt:  EKKEDVEDSDD

KAG5543313.1 hypothetical protein RHGRI_016142 [Rhododendron griersonianum]3.5e-2668.75Show/hide
Query:  KMKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKK
        KMKVVAAYLLAVLGGNTSP A D++ IL SVGAEA+DE+IELLLS+VKGKDI E++A GREK+AS+PA G    A+  ++AGGG   AA AA AAAE+KK
Subjt:  KMKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKK

Query:  EEKKEDVEDSDD
        EEK E+ E+SDD
Subjt:  EEKKEDVEDSDD

KZM99264.1 hypothetical protein DCAR_013374 [Daucus carota subsp. sativus]1.0e-2567.54Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKV+AAYLLAVLGGNTSPTA DI+ IL SVGAEAED++IELLLSQVKGKDI E++A GREK+AS+P+ G  A AV     GG       A  AAAEAKKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDDVNT
        EK ED  +SDDV+T
Subjt:  EKKEDVEDSDDVNT

XP_022143770.1 60S acidic ribosomal protein P2-2-like [Momordica charantia]1.5e-45100Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKEDVEDSDD
Subjt:  EKKEDVEDSDD

TrEMBL top hitse value%identityAlignment
A0A165YUL9 Uncharacterized protein5.0e-2667.54Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKV+AAYLLAVLGGNTSPTA DI+ IL SVGAEAED++IELLLSQVKGKDI E++A GREK+AS+P+ G  A AV     GG       A  AAAEAKKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDDVNT
        EK ED  +SDDV+T
Subjt:  EKKEDVEDSDDVNT

A0A498IEX4 Uncharacterized protein6.5e-2664.17Show/hide
Query:  QLSLQKKMKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALA
        +++ + +MKVVAAYLLAVLGG T+PTA DI+ IL SVGAEA+D++I+LLLS+VKGKDI E++A GREK+AS+PA G    AV V   GGG   AA AA A
Subjt:  QLSLQKKMKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALA

Query:  AAEAKKEEKKEDVEDSDDVN
        AAEAKKEEK E+ E+SDD N
Subjt:  AAEAKKEEKKEDVEDSDDVN

A0A6A1WJT8 60S acidic ribosomal protein P2-41.3e-2668.47Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKV+AAYLLAVLGGNT P+A D++ IL SVGAE ED+KIELLLS+VKGKDI +++A GREK+AS+P+ G VA AV   T GGG A+AA AA AAAE KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EK E+ E+SDD
Subjt:  EKKEDVEDSDD

A0A6J1CPQ6 60S acidic ribosomal protein P2-2-like7.4e-46100Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKEDVEDSDD
Subjt:  EKKEDVEDSDD

S8D2Z2 Uncharacterized protein (Fragment)2.0e-2768.14Show/hide
Query:  KKMKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAK
        + MKVVAAYLLAVLGGN+SPTA D++ IL SVGA+A+DE+IELLLSQVKGKDI E++A GREK+AS+PA G  A AV     GGG    A AA AAAEAK
Subjt:  KKMKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAK

Query:  KEEKKEDVEDSDD
        KEEK E+ E+SDD
Subjt:  KEEKKEDVEDSDD

SwissProt top hitse value%identityAlignment
O01725 60S acidic ribosomal protein P21.6e-2155.86Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        M+ VAAYLLAVLGGN +P+A DI+ IL SVG +AEDE++  ++ ++KGKDI EV+A GR K++S+P+ G VAAA G    GGG A+    A  AAE KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKE+ E+  D
Subjt:  EKKEDVEDSDD

O24415 60S acidic ribosomal protein P2B1.1e-2256.76Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKV+AAYLLAVLGGNTSPTA D+++IL SVGAEA++EK+E LL+++K KDI EV+A GRE+++S+P+ G      G +  G   A A   A  A EAKKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EK E+ E+SD+
Subjt:  EKKEDVEDSDD

P41099 60S acidic ribosomal protein P21.2e-2462.73Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKV+AA+LLA+LGGNTSPT  D+++ILASVGA+A+D+KIELLLSQVKGKDI E++A GRE++AS+P+ G VA A      GGGDA AA    AA E KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSD
        EK E+  D +
Subjt:  EKKEDVEDSD

P51407 60S acidic ribosomal protein P2-14.5e-2461.26Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKVVAA+LLAVL G  SPT  DI+ IL SVGAE ED +IELLL +VKGKD+AE++A GREK+AS+P+ G    AV   T+GGG    A     AAE+KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKE+ E+SDD
Subjt:  EKKEDVEDSDD

Q9SLF7 60S acidic ribosomal protein P2-21.1e-2563.06Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKVVAAYLLAVL G  SPT+ DI+TIL SVGAE ED +IELLL +VKGKD+AE++A GREK+AS+P+ G    AV   T+GGG    A    +AAE+KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKE+ E+SDD
Subjt:  EKKEDVEDSDD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family7.6e-2763.06Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKVVAAYLLAVL G  SPT+ DI+TIL SVGAE ED +IELLL +VKGKD+AE++A GREK+AS+P+ G    AV   T+GGG    A    +AAE+KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKE+ E+SDD
Subjt:  EKKEDVEDSDD

AT2G27710.2 60S acidic ribosomal protein family7.6e-2763.06Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKVVAAYLLAVL G  SPT+ DI+TIL SVGAE ED +IELLL +VKGKD+AE++A GREK+AS+P+ G    AV   T+GGG    A    +AAE+KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKE+ E+SDD
Subjt:  EKKEDVEDSDD

AT2G27710.3 60S acidic ribosomal protein family7.6e-2763.06Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKVVAAYLLAVL G  SPT+ DI+TIL SVGAE ED +IELLL +VKGKD+AE++A GREK+AS+P+ G    AV   T+GGG    A    +AAE+KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKE+ E+SDD
Subjt:  EKKEDVEDSDD

AT2G27710.4 60S acidic ribosomal protein family7.9e-2459.46Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKVVAAYLLAVL G  SPT+ DI+TIL SVGAE ED +IELLL +VKGKD+AE++A GREK+AS+P+              GG AS       AAE+KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKE+ E+SDD
Subjt:  EKKEDVEDSDD

AT2G27720.1 60S acidic ribosomal protein family3.2e-2561.26Show/hide
Query:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE
        MKVVAA+LLAVL G  SPT  DI+ IL SVGAE ED +IELLL +VKGKD+AE++A GREK+AS+P+ G    AV   T+GGG    A     AAE+KKE
Subjt:  MKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAEDEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKE

Query:  EKKEDVEDSDD
        EKKE+ E+SDD
Subjt:  EKKEDVEDSDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCGCATCATATCGAAGCAGTTGTTAACTGCAAAATATTTATGAGAGAGAGAGACCAGCGATTTCTCCCTCTTATAATCACCAGCCCACTCATTTCTTCTGC
GTTTTCAACTTCCCCTCTTCCAAGGCCAAGGAGTTTTTCGCTCTCTTCCCATTTCCCTCCCTTTCATTCTTCGTTGCTCCTCTTTGTGGTGATTCAGCTATCTTTGCAGA
AGAAGATGAAGGTGGTTGCTGCTTATTTGCTCGCTGTTTTGGGCGGAAACACCAGCCCTACTGCTCGTGATATTAGGACCATTCTCGCCTCTGTTGGAGCTGAAGCTGAA
GATGAAAAGATTGAGCTGCTCCTTTCTCAAGTTAAGGGTAAGGATATAGCAGAGGTTGTTGCCTGCGGGAGGGAGAAGATGGCATCTCTACCTGCCCGCGGTGTCGTTGC
AGCTGCTGTTGGTGTGCTCACTGCCGGTGGGGGCGATGCTTCCGCTGCCACGGCTGCTCTGGCTGCAGCTGAGGCTAAGAAAGAGGAGAAGAAGGAAGATGTTGAGGATT
CTGATGATGTAAATACATCCCCTTCGACATTTGCTTTACTCTGTTTGATGAGTAAGGAATTGGGTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCGCATCATATCGAAGCAGTTGTTAACTGCAAAATATTTATGAGAGAGAGAGACCAGCGATTTCTCCCTCTTATAATCACCAGCCCACTCATTTCTTCTGC
GTTTTCAACTTCCCCTCTTCCAAGGCCAAGGAGTTTTTCGCTCTCTTCCCATTTCCCTCCCTTTCATTCTTCGTTGCTCCTCTTTGTGGTGATTCAGCTATCTTTGCAGA
AGAAGATGAAGGTGGTTGCTGCTTATTTGCTCGCTGTTTTGGGCGGAAACACCAGCCCTACTGCTCGTGATATTAGGACCATTCTCGCCTCTGTTGGAGCTGAAGCTGAA
GATGAAAAGATTGAGCTGCTCCTTTCTCAAGTTAAGGGTAAGGATATAGCAGAGGTTGTTGCCTGCGGGAGGGAGAAGATGGCATCTCTACCTGCCCGCGGTGTCGTTGC
AGCTGCTGTTGGTGTGCTCACTGCCGGTGGGGGCGATGCTTCCGCTGCCACGGCTGCTCTGGCTGCAGCTGAGGCTAAGAAAGAGGAGAAGAAGGAAGATGTTGAGGATT
CTGATGATGTAAATACATCCCCTTCGACATTTGCTTTACTCTGTTTGATGAGTAAGGAATTGGGTTCCTGA
Protein sequenceShow/hide protein sequence
MAMAHHIEAVVNCKIFMRERDQRFLPLIITSPLISSAFSTSPLPRPRSFSLSSHFPPFHSSLLLFVVIQLSLQKKMKVVAAYLLAVLGGNTSPTARDIRTILASVGAEAE
DEKIELLLSQVKGKDIAEVVACGREKMASLPARGVVAAAVGVLTAGGGDASAATAALAAAEAKKEEKKEDVEDSDDVNTSPSTFALLCLMSKELGS