; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g23480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g23480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionvacuolar protein sorting-associated protein 55 homolog isoform X1
Genome locationchr1:16440006..16443904
RNA-Seq ExpressionMoc01g23480
SyntenyMoc01g23480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595172.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.3e-5998.33Show/hide
Query:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
        VLAGLAFMFSSSILLQILACALYNNWWP+LSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
Subjt:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS

Query:  FFIFVCTVLCFHRVSLEDDW
        FFIFVCTVLCFHRVSLEDDW
Subjt:  FFIFVCTVLCFHRVSLEDDW

XP_008462591.2 PREDICTED: vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucumis melo]6.7e-6095.24Show/hide
Query:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        M +   VLAGLAFMFSSSILLQILACALYNNWWP+LSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022133002.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Momordica charantia]6.0e-6198.41Show/hide
Query:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MTMTLE  AGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022963366.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita moschata]4.3e-5998.33Show/hide
Query:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
        VLAGLAFMFSSSILLQILACALYNNWWP+LSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
Subjt:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS

Query:  FFIFVCTVLCFHRVSLEDDW
        FFIFVCTVLCFHRVSLEDDW
Subjt:  FFIFVCTVLCFHRVSLEDDW

XP_023518928.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita pepo subsp. pepo]4.3e-5998.33Show/hide
Query:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
        VLAGLAFMFSSSILLQILACALYNNWWP+LSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
Subjt:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS

Query:  FFIFVCTVLCFHRVSLEDDW
        FFIFVCTVLCFHRVSLEDDW
Subjt:  FFIFVCTVLCFHRVSLEDDW

TrEMBL top hitse value%identityAlignment
A0A0A0KHI6 Uncharacterized protein3.2e-6095.24Show/hide
Query:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        M +   VLAGLAFMFSSSILLQILACALYNNWWP+LSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A1S3CIW0 vacuolar protein sorting-associated protein 55 homolog isoform X13.2e-6095.24Show/hide
Query:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        M +   VLAGLAFMFSSSILLQILACALYNNWWP+LSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1BVE3 vacuolar protein sorting-associated protein 55 homolog isoform X12.9e-6198.41Show/hide
Query:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MTMTLE  AGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1HFY6 vacuolar protein sorting-associated protein 55 homolog isoform X12.1e-5998.33Show/hide
Query:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
        VLAGLAFMFSSSILLQILACALYNNWWP+LSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
Subjt:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS

Query:  FFIFVCTVLCFHRVSLEDDW
        FFIFVCTVLCFHRVSLEDDW
Subjt:  FFIFVCTVLCFHRVSLEDDW

A0A6J1ICF8 vacuolar protein sorting-associated protein 55 homolog isoform X12.1e-5998.33Show/hide
Query:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
        VLAGLAFMFSSSILLQILACALYNNWWP+LSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
Subjt:  VLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS

Query:  FFIFVCTVLCFHRVSLEDDW
        FFIFVCTVLCFHRVSLEDDW
Subjt:  FFIFVCTVLCFHRVSLEDDW

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 554.1e-0425.86Show/hide
Query:  LEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMF
        L  +  L+   +   LL IL+CAL++N++P+   L+++L P+P   F  G+   T   +S         A FLTG      +A+P++  H  +I   +  
Subjt:  LEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMF

Query:  IEFVSFFIFVCTVLCF
        +  +   I   +++ F
Subjt:  IEFVSFFIFVCTVLCF

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog2.0e-2756.48Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWPMLS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

Q9UUH1 Vacuolar protein sorting-associated protein 551.4e-0424.59Show/hide
Query:  LEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIE
        L  + GL+ + +   +L IL+CAL+ NW+P+L  + ++L P+P L     ST    +  +    +   +F  GA+     A+PI+  +  +I T A  + 
Subjt:  LEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIE

Query:  FVSFFIFVCTVLCFHRVSLEDD
         V   I    +  + +  ++ +
Subjt:  FVSFFIFVCTVLCFHRVSLEDD

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein1.4e-2856.48Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWPMLS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein1.4e-2856.48Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWPMLS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein1.4e-2856.48Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWPMLS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT3G11530.1 Vacuolar protein sorting 55 (VPS55) family protein9.0e-5588.5Show/hide
Query:  MFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWPMLSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW

AT3G11530.2 Vacuolar protein sorting 55 (VPS55) family protein9.0e-5588.5Show/hide
Query:  MFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWPMLSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATGACATTGGAAGTGTTAGCTGGTCTTGCGTTTATGTTTTCATCTAGCATCTTGCTACAGATTTTGGCTTGTGCACTATACAACAATTGGTGGCCTATGTTATC
AGCTTTGATGTATGTTCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGAGGGTCCACACAGTTTCTGATTAGCCGAGATGGTGGAGGATGGATAGGTGCTGCTAAATTCT
TGACAGGAGCTTCAACTGTGGGGAGTTTGGCAATTCCTATTATCCTGAGGCATGCTCATATGATCGATACCGGAGCCATGTTCATAGAGTTCGTTTCCTTCTTCATTTTT
GTTTGCACTGTCTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGATGACATTGGAAGTGTTAGCTGGTCTTGCGTTTATGTTTTCATCTAGCATCTTGCTACAGATTTTGGCTTGTGCACTATACAACAATTGGTGGCCTATGTTATC
AGCTTTGATGTATGTTCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGAGGGTCCACACAGTTTCTGATTAGCCGAGATGGTGGAGGATGGATAGGTGCTGCTAAATTCT
TGACAGGAGCTTCAACTGTGGGGAGTTTGGCAATTCCTATTATCCTGAGGCATGCTCATATGATCGATACCGGAGCCATGTTCATAGAGTTCGTTTCCTTCTTCATTTTT
GTTTGCACTGTCTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGA
Protein sequenceShow/hide protein sequence
MTMTLEVLAGLAFMFSSSILLQILACALYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIF
VCTVLCFHRVSLEDDW