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Moc01g24670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g24670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationchr1:17487970..17491410
RNA-Seq ExpressionMoc01g24670
SyntenyMoc01g24670
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133053.1 uncharacterized protein LOC111005740 isoform X2 [Momordica charantia]1.3e-53100Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

XP_022950290.1 uncharacterized protein LOC111453422 [Cucurbita moschata]3.3e-4992.16Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRD+SRASLGNEEELIASA PPT T+SFPT+NHHPYHQSHH PPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

XP_022977957.1 uncharacterized protein LOC111478092 [Cucurbita maxima]8.6e-5093.14Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASA PPT TDSFPT+NHHPYHQSHH PPTRKSILSCFNCC+
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

XP_023545041.1 uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo]1.5e-4993.14Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASA PPT T+SFPT+NHHPYHQSHH PPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

XP_038881128.1 uncharacterized protein LOC120072730 [Benincasa hispida]1.1e-4992.16Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKG LPDYSLDFSK+RENRKQNKR+VSRASLGNEEELI SA PPT T+SFPT+NHHPYHQSHHPPPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

TrEMBL top hitse value%identityAlignment
A0A0A0KJ83 Uncharacterized protein2.7e-4991.18Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKG LPDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA A PPT TD+FPT+NHHPYHQ+HH PPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

A0A1S3B0G0 uncharacterized protein LOC103484698 isoform X21.6e-4993.2Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPY-HQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKG LPDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA A PPT TDSFPT+NHHPY HQSHHPPPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPY-HQSHHPPPTRKSILSCFNCC

Query:  VKA
        VKA
Subjt:  VKA

A0A6J1BXX7 uncharacterized protein LOC111005740 isoform X26.2e-54100Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

A0A6J1GFA9 uncharacterized protein LOC1114534221.6e-4992.16Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRD+SRASLGNEEELIASA PPT T+SFPT+NHHPYHQSHH PPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

A0A6J1IJV1 uncharacterized protein LOC1114780924.2e-5093.14Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASA PPT TDSFPT+NHHPYHQSHH PPTRKSILSCFNCC+
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown5.1e-3264.55Show/hide
Query:  DDRKEKTAPWLSVPQFGDWDQK--GPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI---ASATPPTVTDSFPTENHHPYHQSH----HPPPTRKSI
        DDRKEK  PWLSVPQFGDWDQK  G +PDYS+DF+KIRE RKQNKRD SRASLGNEEELI    SAT      +  +EN   +  SH    H P TR+S+
Subjt:  DDRKEKTAPWLSVPQFGDWDQK--GPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI---ASATPPTVTDSFPTENHHPYHQSH----HPPPTRKSI

Query:  LSCFNCCVKA
         SCFNCCVKA
Subjt:  LSCFNCCVKA

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein5.1e-1642.45Show/hide
Query:  DRKEKTAPWLSVPQFGDWDQKGP--LPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHH-----PPPTRKSILSC
        D++ + A W  VPQFG WDQKGP    +YS+ FSK R NRKQNK  V  +SLG+E+EL+ S             NH   H  H      P   +K IL+ 
Subjt:  DRKEKTAPWLSVPQFGDWDQKGP--LPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHH-----PPPTRKSILSC

Query:  FNCCVK
         NCC++
Subjt:  FNCCVK

AT5G64850.1 FUNCTIONS IN: molecular_function unknown2.0e-2859.65Show/hide
Query:  MDDRKE-KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI---------ASATPPTVTDSFPTENHHPYHQSHHP--PPT
        M+DRKE K +PWLSVPQFGDWDQKG   DYS+DFSKIRE RK NKRD SRASLGNEEELI          +A P  +T      N+      HHP  P  
Subjt:  MDDRKE-KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI---------ASATPPTVTDSFPTENHHPYHQSHHP--PPT

Query:  RKSILSCFNCCVKA
        R+ I SCFNCCVKA
Subjt:  RKSILSCFNCCVKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCGGAAGGAGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAAAAGGGACCGCTGCCGGACTACTCCCTTGATTTTTCTAAAATTAG
GGAAAATAGGAAACAGAACAAGAGAGATGTGTCTAGGGCGAGTCTCGGAAATGAAGAGGAGCTCATTGCCTCAGCCACGCCCCCAACCGTAACAGACTCTTTTCCTACTG
AAAATCACCACCCCTATCATCAGAGTCACCATCCTCCACCAACGAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCGGAAGGAGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAAAAGGGACCGCTGCCGGACTACTCCCTTGATTTTTCTAAAATTAG
GGAAAATAGGAAACAGAACAAGAGAGATGTGTCTAGGGCGAGTCTCGGAAATGAAGAGGAGCTCATTGCCTCAGCCACGCCCCCAACCGTAACAGACTCTTTTCCTACTG
AAAATCACCACCCCTATCATCAGAGTCACCATCCTCCACCAACGAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCCTGA
Protein sequenceShow/hide protein sequence
MDDRKEKTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASATPPTVTDSFPTENHHPYHQSHHPPPTRKSILSCFNCCVKA