; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g25510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g25510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionU1 small nuclear ribonucleoprotein A isoform X2
Genome locationchr1:18202885..18209860
RNA-Seq ExpressionMoc01g25510
SyntenyMoc01g25510
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133116.1 protein WHI4 [Momordica charantia]2.2e-176100Show/hide
Query:  MASFYPPPPQAPPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MASFYPPPPQAPPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MASFYPPPPQAPPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYP
        SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYP
Subjt:  SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYP

Query:  SAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
        SAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Subjt:  SAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM

Query:  RLEYAKSRMGMRKKLK
        RLEYAKSRMGMRKKLK
Subjt:  RLEYAKSRMGMRKKLK

XP_022949757.1 protein WHI4 isoform X2 [Cucurbita moschata]1.3e-16594.64Show/hide
Query:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
        + S+Y PPPQ  PP QPSGLEAPHYPYYQVPPPPSSAP SQHYLAQHPPTFA+YGLPFLPHAAS NEVRTLFIAGLP+DVKPREIYNLFREFPGYESSHL
Subjt:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL

Query:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY
        RSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPD GLGSTHMSGMGNSAYNTIGY
Subjt:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY

Query:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
        PSAQSHGSFD+K+VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Subjt:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG

Query:  MRLEYAKSRMGMRKKLK
        MRLEYAKSRMGMRKKLK
Subjt:  MRLEYAKSRMGMRKKLK

XP_022977593.1 protein WHI4 isoform X1 [Cucurbita maxima]3.0e-16594.64Show/hide
Query:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
        + S+Y PPPQ  PP QPSGLEAPHYPYYQVPPPPSSAP SQHYLAQHPPTFA+YGLPFLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
Subjt:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL

Query:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY
        RSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKKAKVS+FSR TPD GLGSTHMSGMGNSAYNTIGY
Subjt:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY

Query:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
        PSAQSHGSFDNK+VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Subjt:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG

Query:  MRLEYAKSRMGMRKKLK
        MRLEYAKSRMGMRKKLK
Subjt:  MRLEYAKSRMGMRKKLK

XP_023543723.1 protein WHI4 isoform X2 [Cucurbita pepo subsp. pepo]7.8e-16694.64Show/hide
Query:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
        + S+Y PPPQ  PP QPSGLEAPHYPYYQVPPPPSSAP SQHYLAQHPPTFA+YGLPFLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
Subjt:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL

Query:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY
        RSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPD GLGSTHMSGMGNSAYNTIGY
Subjt:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY

Query:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
        PSAQSHGSFD+K+VNDTVAANVTPQNPPCPTLFVANLGPSCTEQEL+Q FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Subjt:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG

Query:  MRLEYAKSRMGMRKKLK
        MRLEYAKSRMGMRKKLK
Subjt:  MRLEYAKSRMGMRKKLK

XP_038881694.1 protein WHI4 isoform X2 [Benincasa hispida]3.0e-16594.62Show/hide
Query:  MASFYPPPPQAPPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MAS+YP P   PPPQPSGLE PHYP+YQVPPPPSSAPPSQHYL+QHPPTFA+YGLPFLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MASFYPPPPQAPPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYP
        +PTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPD GLGSTHMSGMGNSAYNTIGYP
Subjt:  SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYP

Query:  SAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
        SAQSHGSFDNK+VNDTVAANV PQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDT CSTGALNHLQGSILYSSPPGEGM
Subjt:  SAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM

Query:  RLEYAKSRMGMRKKLK
        RLEYAKSRMGMRKKLK
Subjt:  RLEYAKSRMGMRKKLK

TrEMBL top hitse value%identityAlignment
A0A6J1BU41 protein WHI41.1e-176100Show/hide
Query:  MASFYPPPPQAPPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MASFYPPPPQAPPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MASFYPPPPQAPPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYP
        SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYP
Subjt:  SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYP

Query:  SAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
        SAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Subjt:  SAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM

Query:  RLEYAKSRMGMRKKLK
        RLEYAKSRMGMRKKLK
Subjt:  RLEYAKSRMGMRKKLK

A0A6J1GCW9 U1 small nuclear ribonucleoprotein A isoform X19.3e-16594.34Show/hide
Query:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
        + S+Y PPPQ  PP QPSGLEAPHYPYYQVPPPPSSAP SQHYLAQHPPTFA+YGLPFLPHAAS NEVRTLFIAGLP+DVKPREIYNLFREFPGYESSHL
Subjt:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL

Query:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPD-SGLGSTHMSGMGNSAYNTIG
        RSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPD +GLGSTHMSGMGNSAYNTIG
Subjt:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPD-SGLGSTHMSGMGNSAYNTIG

Query:  YPSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGE
        YPSAQSHGSFD+K+VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGE
Subjt:  YPSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGE

Query:  GMRLEYAKSRMGMRKKLK
        GMRLEYAKSRMGMRKKLK
Subjt:  GMRLEYAKSRMGMRKKLK

A0A6J1GD02 protein WHI4 isoform X26.4e-16694.64Show/hide
Query:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
        + S+Y PPPQ  PP QPSGLEAPHYPYYQVPPPPSSAP SQHYLAQHPPTFA+YGLPFLPHAAS NEVRTLFIAGLP+DVKPREIYNLFREFPGYESSHL
Subjt:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL

Query:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY
        RSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+FSRSTPD GLGSTHMSGMGNSAYNTIGY
Subjt:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY

Query:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
        PSAQSHGSFD+K+VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Subjt:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG

Query:  MRLEYAKSRMGMRKKLK
        MRLEYAKSRMGMRKKLK
Subjt:  MRLEYAKSRMGMRKKLK

A0A6J1IMS7 U1 small nuclear ribonucleoprotein A isoform X22.1e-16494.34Show/hide
Query:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
        + S+Y PPPQ  PP QPSGLEAPHYPYYQVPPPPSSAP SQHYLAQHPPTFA+YGLPFLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
Subjt:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL

Query:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPD-SGLGSTHMSGMGNSAYNTIG
        RSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKKAKVS+FSR TPD +GLGSTHMSGMGNSAYNTIG
Subjt:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPD-SGLGSTHMSGMGNSAYNTIG

Query:  YPSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGE
        YPSAQSHGSFDNK+VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGE
Subjt:  YPSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGE

Query:  GMRLEYAKSRMGMRKKLK
        GMRLEYAKSRMGMRKKLK
Subjt:  GMRLEYAKSRMGMRKKLK

A0A6J1IQG5 protein WHI4 isoform X11.4e-16594.64Show/hide
Query:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
        + S+Y PPPQ  PP QPSGLEAPHYPYYQVPPPPSSAP SQHYLAQHPPTFA+YGLPFLPHAAS NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL
Subjt:  MASFYPPPPQ-APPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL

Query:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY
        RSPTQTTQPFAFAVFSDQQSA+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTEDERYGSDKKAKVS+FSR TPD GLGSTHMSGMGNSAYNTIGY
Subjt:  RSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGY

Query:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
        PSAQSHGSFDNK+VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQ FSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Subjt:  PSAQSHGSFDNKSVNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG

Query:  MRLEYAKSRMGMRKKLK
        MRLEYAKSRMGMRKKLK
Subjt:  MRLEYAKSRMGMRKKLK

SwissProt top hitse value%identityAlignment
Q6DH13 RNA-binding protein, mRNA-processing factor 2a6.5e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q6ZRY4 RNA-binding protein with multiple splicing 23.8e-1442.55Show/hide
Query:  ASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        A   EVRTLF++GLP D+KPRE+Y LFR F GYE S ++   +  QP  F +F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  ASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q8VC52 RNA-binding protein with multiple splicing 23.8e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F +F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q9W6I1 RNA-binding protein with multiple splicing 28.4e-1443.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +A+NG+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q9YGP5 RNA-binding protein with multiple splicing 21.1e-1343.33Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F ++  A  A +A+NG+ FD E    L ++ AK+N++  + +
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTR

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.7e-8257.1Show/hide
Query:  LEAPHYPYYQV-----PPPPSSAP-PSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA
        LEA +Y +Y +     PPPP  +P P     + + PT  + G        + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS +   +PFAFA
Subjt:  LEAPHYPYYQV-----PPPPSSAP-PSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA

Query:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKS
        VFSD QSA+  MHA+NGMVFDLEK S L++DLAKSN +SKR+RT+D   G +   K+  ++ +T +SG GS    GM +SAYNTIGY  AQS G   N +
Subjt:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKS

Query:  VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLEYAKSRMGMR
             +   +    PCPTLF+AN+GP+CTE ELIQ FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQG++LYSS  GE +RL+YA+SRMGMR
Subjt:  VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLEYAKSRMGMR

Query:  KKL
        KK+
Subjt:  KKL

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-7656.16Show/hide
Query:  LEAPHYPYYQV-----PPPPSSAP-PSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA
        LEA +Y +Y +     PPPP  +P P     + + PT  + G        + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS +   +PFAFA
Subjt:  LEAPHYPYYQV-----PPPPSSAP-PSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA

Query:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKS
        VFSD QSA+  MHA+NGMVFDLEK S L++DLAKSN +SKR+RT+D   G +   K+  ++ +T +SG GS    GM +SAYNTIGY  AQS G   N +
Subjt:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKS

Query:  VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLEY
             +   +    PCPTLF+AN+GP+CTE ELIQ FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQG++LYSS  GE +RL+Y
Subjt:  VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLEY

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-7856.44Show/hide
Query:  LEAPHYPYYQV-----PPPPSSAP-PSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA
        LEA +Y +Y +     PPPP  +P P     + + PT  + G        + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLRS +   +PFAFA
Subjt:  LEAPHYPYYQV-----PPPPSSAP-PSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFA

Query:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKS
        VFSD QSA+  MHA+NGMVFDLEK S L++DLAKSN +SKR+RT+D   G +   K+  ++ +T +SG GS    GM +SAYNTIGY  AQS G   N +
Subjt:  VFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKS

Query:  VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLEYAKSRMGMR
             +   +    PCPTLF+AN+GP+CTE ELIQ FSRC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQG++LYSS  GE +RL+   SRMGMR
Subjt:  VNDTVAANVTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLEYAKSRMGMR

Query:  KKL
        KK+
Subjt:  KKL

AT3G13700.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-3134.86Show/hide
Query:  APHYPY-----YQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR---------------
        A H PY     YQ+   P   PP                LP L  A  P  + TLF++GLP DVK REI+NLFR   G+ES  L+               
Subjt:  APHYPY-----YQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR---------------

Query:  ---SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTI
            P       AFA F+  + A+ AM+ +NG+ FD +  S L+++LA+SNSR K      ER GS     +   ++    S       S  G+S  + +
Subjt:  ---SPTQTTQPFAFAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTI

Query:  GYPSAQSHGSFDNKSVNDTV--AANVTPQNP-------------------PCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDT
             Q  G+ D+   NDT    A+  P +                     C TLF+ANLGP+CTE EL Q  SR PGF  LK+++  G PVAF DF++ 
Subjt:  GYPSAQSHGSFDNKSVNDTV--AANVTPQNP-------------------PCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDT

Query:  ACSTGALNHLQGSILYSSPPGEGMRLE
          +T A+NHLQG++L SS  G GM +E
Subjt:  ACSTGALNHLQGSILYSSPPGEGMRLE

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-3737.46Show/hide
Query:  APHYPY-----YQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFS
        A H PY     YQ+   P   PP                LP L  A  P  + TLF++GLP DVK REI+NLFR   G+ES  L+   +  Q  AFA F+
Subjt:  APHYPY-----YQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFS

Query:  DQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKSVND
          + A+ AM+ +NG+ FD +  S L+++LA+SNSR K      ER GS     +   ++    S       S  G+S  + +     Q  G+ D+   ND
Subjt:  DQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKSVND

Query:  TV--AANVTPQNP-------------------PCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSS
        T    A+  P +                     C TLF+ANLGP+CTE EL Q  SR PGF  LK+++  G PVAF DF++   +T A+NHLQG++L SS
Subjt:  TV--AANVTPQNP-------------------PCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSS

Query:  PPGEGMRLEYAKSRM
          G GM +EYA+S+M
Subjt:  PPGEGMRLEYAKSRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGTTTCTATCCGCCACCACCGCAAGCACCACCGCCGCAGCCTTCTGGTCTTGAAGCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCTTCAGCACC
GCCGTCTCAGCATTACCTCGCTCAACACCCGCCCACCTTCGCTACGTATGGCTTACCGTTTTTACCTCACGCAGCGTCCCCTAATGAGGTCCGAACCCTATTCATAGCCG
GCCTTCCTGAAGATGTCAAGCCCCGAGAAATCTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGAGCCCCACGCAGACGACGCAGCCATTTGCA
TTTGCTGTATTCTCGGACCAGCAGTCTGCCATTGGTGCAATGCATGCAGTAAACGGCATGGTATTTGATCTTGAGAAGCAGTCAGTACTATACGTTGATTTAGCTAAATC
CAATTCAAGATCAAAGCGGACAAGGACAGAGGATGAAAGATATGGATCTGATAAGAAAGCTAAAGTATCTATGTTTTCAAGGAGTACACCTGATTCTGGTCTTGGCAGCA
CTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAAGTGTAAATGATACAGTGGCTGCAAAT
GTGACTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTTGGGCCAAGTTGCACAGAGCAAGAGCTAATTCAAACTTTTTCGAGATGCCCGGGTTTTTTGAA
ACTGAAGATGCAGAGCACATATGGGGCCCCAGTTGCTTTTGTTGATTTCCAGGATACTGCCTGTTCAACTGGAGCACTGAACCATCTGCAAGGTTCAATTCTGTACTCAT
CACCTCCTGGGGAGGGCATGCGATTGGAGTACGCAAAATCGCGAATGGGTATGCGAAAGAAATTGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGTTTCTATCCGCCACCACCGCAAGCACCACCGCCGCAGCCTTCTGGTCTTGAAGCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCTTCAGCACC
GCCGTCTCAGCATTACCTCGCTCAACACCCGCCCACCTTCGCTACGTATGGCTTACCGTTTTTACCTCACGCAGCGTCCCCTAATGAGGTCCGAACCCTATTCATAGCCG
GCCTTCCTGAAGATGTCAAGCCCCGAGAAATCTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGAGCCCCACGCAGACGACGCAGCCATTTGCA
TTTGCTGTATTCTCGGACCAGCAGTCTGCCATTGGTGCAATGCATGCAGTAAACGGCATGGTATTTGATCTTGAGAAGCAGTCAGTACTATACGTTGATTTAGCTAAATC
CAATTCAAGATCAAAGCGGACAAGGACAGAGGATGAAAGATATGGATCTGATAAGAAAGCTAAAGTATCTATGTTTTCAAGGAGTACACCTGATTCTGGTCTTGGCAGCA
CTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAAGTGTAAATGATACAGTGGCTGCAAAT
GTGACTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTTGGGCCAAGTTGCACAGAGCAAGAGCTAATTCAAACTTTTTCGAGATGCCCGGGTTTTTTGAA
ACTGAAGATGCAGAGCACATATGGGGCCCCAGTTGCTTTTGTTGATTTCCAGGATACTGCCTGTTCAACTGGAGCACTGAACCATCTGCAAGGTTCAATTCTGTACTCAT
CACCTCCTGGGGAGGGCATGCGATTGGAGTACGCAAAATCGCGAATGGGTATGCGAAAGAAATTGAAATGA
Protein sequenceShow/hide protein sequence
MASFYPPPPQAPPPQPSGLEAPHYPYYQVPPPPSSAPPSQHYLAQHPPTFATYGLPFLPHAASPNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFA
FAVFSDQQSAIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSMFSRSTPDSGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKSVNDTVAAN
VTPQNPPCPTLFVANLGPSCTEQELIQTFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLEYAKSRMGMRKKLK