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Moc01g26410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g26410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPatatin
Genome locationchr1:18788153..18789247
RNA-Seq ExpressionMoc01g26410
SyntenyMoc01g26410
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIA46438.1 hypothetical protein AQUCO_01500168v1 [Aquilegia coerulea]9.6e-0738.83Show/hide
Query:  MEKLYDSSSTTWDKLF-HCSLDTVPI-----------KPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKK
        ME L++  ST   +++   S D V I           K  YLRIQ+DTL GT+AS DIATD+NLR LV +   LL KP+  V         + G+H++  
Subjt:  MEKLYDSSSTTWDKLF-HCSLDTVPI-----------KPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKK

Query:  NDG
         +G
Subjt:  NDG

PIA46439.1 hypothetical protein AQUCO_01500168v1 [Aquilegia coerulea]9.6e-0738.83Show/hide
Query:  MEKLYDSSSTTWDKLF-HCSLDTVPI-----------KPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKK
        ME L++  ST   +++   S D V I           K  YLRIQ+DTL GT+AS DIATD+NLR LV +   LL KP+  V         + G+H++  
Subjt:  MEKLYDSSSTTWDKLF-HCSLDTVPI-----------KPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKK

Query:  NDG
         +G
Subjt:  NDG

PQM41357.1 patatin-like protein 2 [Prunus yedoensis var. nudiflora]4.3e-0745.35Show/hide
Query:  DSSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKKNDG
        D+SS   D        +V  K  YLRIQED+L G  ASLDIAT++NLRRLVEI   LL KP+  V+          GK++Q + +G
Subjt:  DSSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKKNDG

XP_004288059.1 PREDICTED: patatin-like protein 1 [Fragaria vesca subsp. vesca]9.6e-0742.17Show/hide
Query:  DSSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVK--NGVHMGCTSLGKHKQ
        D+SS   D        ++  K  YLRIQ+D+L+G  AS+DIAT++NL+RLVEI +GLL KP+  V    G +  C   G +++
Subjt:  DSSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVK--NGVHMGCTSLGKHKQ

XP_008241529.1 PREDICTED: patatin-like protein 3 [Prunus mume]9.6e-0745.45Show/hide
Query:  DSSSTTWDKLFHCS--LDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKKNDG
        D+SS   D  FH S    +V  K  YLRIQ+D+L G  AS+DIAT++NLRRLVEI   LL KP+  V+          GK++Q + +G
Subjt:  DSSSTTWDKLFHCS--LDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKKNDG

TrEMBL top hitse value%identityAlignment
A0A2G5DSG3 Patatin4.6e-0738.83Show/hide
Query:  MEKLYDSSSTTWDKLF-HCSLDTVPI-----------KPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKK
        ME L++  ST   +++   S D V I           K  YLRIQ+DTL GT+AS DIATD+NLR LV +   LL KP+  V         + G+H++  
Subjt:  MEKLYDSSSTTWDKLF-HCSLDTVPI-----------KPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKK

Query:  NDG
         +G
Subjt:  NDG

A0A2G5DSG7 Patatin4.6e-0738.83Show/hide
Query:  MEKLYDSSSTTWDKLF-HCSLDTVPI-----------KPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKK
        ME L++  ST   +++   S D V I           K  YLRIQ+DTL GT+AS DIATD+NLR LV +   LL KP+  V         + G+H++  
Subjt:  MEKLYDSSSTTWDKLF-HCSLDTVPI-----------KPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKK

Query:  NDG
         +G
Subjt:  NDG

A0A314UV15 Patatin2.1e-0745.35Show/hide
Query:  DSSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKKNDG
        D+SS   D        +V  K  YLRIQED+L G  ASLDIAT++NLRRLVEI   LL KP+  V+          GK++Q + +G
Subjt:  DSSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKKNDG

A0A3S3P6F4 Patatin4.6e-0767.39Show/hide
Query:  IKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEV
        +K  YL+IQ+DTL+GT ASLDIATDQNL  LV+I EGLL KP+  V
Subjt:  IKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEV

A0A498I098 Patatin7.9e-0744.19Show/hide
Query:  DSSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKKNDG
        D+SS   D        +V  K  YLRIQ+DTL G  ASLDIAT++NL+RLVEI   LL KP+  V           GK++  K +G
Subjt:  DSSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKKNDG

SwissProt top hitse value%identityAlignment
O23181 Patatin-like protein 32.7e-0447.62Show/hide
Query:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEV
        YLRI +D+L G + S+DI+T++N+  LVE+ E LL K +  V
Subjt:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEV

O48723 Patatin-like protein 23.5e-0448Show/hide
Query:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGC
        Y+RIQ+DTL G  AS+DIAT +NL  L +  + LL KP+  V   +  GC
Subjt:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGC

Q2MY40 Patatin-114.6e-0446.34Show/hide
Query:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKE
        YLR+QE+ LNGT   +D A++ N+  LV++ E LL KP+ +
Subjt:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKE

Q2MY42 Patatin-04/094.6e-0446.34Show/hide
Query:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKE
        YLR+QE+ LNGT   +D A++ N+  LV++ E LL KP+ +
Subjt:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKE

Q8LPW4 Patatin-173.2e-0535.71Show/hide
Query:  MEKLYD-SSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKE
        ++K+ D +SS   D     +   +  K  YLR+QE+ L GT   +D A++ N+  LV++ E LL KP+ E
Subjt:  MEKLYD-SSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKE

Arabidopsis top hitse value%identityAlignment
AT2G26560.1 phospholipase A 2A2.5e-0548Show/hide
Query:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGC
        Y+RIQ+DTL G  AS+DIAT +NL  L +  + LL KP+  V   +  GC
Subjt:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGC

AT4G37050.1 PATATIN-like protein 41.9e-0547.62Show/hide
Query:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEV
        YLRI +D+L G + S+DI+T++N+  LVE+ E LL K +  V
Subjt:  YLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGTTGTATGACAGTAGTTCGACAACGTGGGACAAGCTATTCCATTGTTCATTGGACACTGTTCCGATTAAACCCTATTATCTTCGCATTCAAGAAGACACGCT
CAATGGCACCATAGCATCATTGGACATTGCCACAGATCAAAACCTTCGGCGGCTCGTAGAAATCCGCGAAGGGTTGTTGGATAAGCCTATCAAGGAAGTGAAGAATGGGG
TGCACATGGGTTGCACGAGCCTTGGCAAGCACAAGCAGAAGAAGAATGATGGATACTGGATACTTGATATGGATTGGGAATTTTCATTCGAATTCACAAAACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGTTGTATGACAGTAGTTCGACAACGTGGGACAAGCTATTCCATTGTTCATTGGACACTGTTCCGATTAAACCCTATTATCTTCGCATTCAAGAAGACACGCT
CAATGGCACCATAGCATCATTGGACATTGCCACAGATCAAAACCTTCGGCGGCTCGTAGAAATCCGCGAAGGGTTGTTGGATAAGCCTATCAAGGAAGTGAAGAATGGGG
TGCACATGGGTTGCACGAGCCTTGGCAAGCACAAGCAGAAGAAGAATGATGGATACTGGATACTTGATATGGATTGGGAATTTTCATTCGAATTCACAAAACTGTAG
Protein sequenceShow/hide protein sequence
MEKLYDSSSTTWDKLFHCSLDTVPIKPYYLRIQEDTLNGTIASLDIATDQNLRRLVEIREGLLDKPIKEVKNGVHMGCTSLGKHKQKKNDGYWILDMDWEFSFEFTKL