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Moc01g26540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g26540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationchr1:18923811..18924376
RNA-Seq ExpressionMoc01g26540
SyntenyMoc01g26540
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAN09212.1 xyloglucan endotransglucosylase/hydrolase [Eustoma grandiflorum]2.9e-1761.73Show/hide
Query:  YPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        Y L FSFFV    A FLQDFR+TWSDSHI Q  GG+A++ +LDQ SGCGFAS  ++L  +VSMKI +VPG+S   VTAFY+
Subjt:  YPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

ERN10442.1 hypothetical protein AMTR_s00026p00217290 [Amborella trichopoda]2.2e-1769.12Show/hide
Query:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        A FLQDFR+TWSDSHI Q  GG+AI+ VLDQ+SGCGFASKNQ+L  +VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

GFZ18849.1 xyloglucan endotransglucosylase/hydrolase 7 [Actinidia rufa]2.9e-1761.9Show/hide
Query:  HAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        H    L FSF V      FLQDF++TWSDSHI Q +GGTAI+ VLDQ SGCGFASK+Q+L  +VSMKI +VPG+S   VTAFY+
Subjt:  HAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

XP_010936207.1 probable xyloglucan endotransglucosylase/hydrolase protein 6 [Elaeis guineensis]2.9e-1751.82Show/hide
Query:  APTILTSFAFNLCFVGLTLRQRSSHGHAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGN
        AP +L  F   L   G    + SS    F+ L  + +V    A FLQDFRITW+DSHI Q  GGTAI+  LDQ+SGCGFASK+Q+L  +VSMKI ++PG+
Subjt:  APTILTSFAFNLCFVGLTLRQRSSHGHAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGN

Query:  S---VTAFYV
        S   VTAFY+
Subjt:  S---VTAFYV

XP_011625079.1 LOW QUALITY PROTEIN: probable xyloglucan endotransglucosylase/hydrolase protein 6 [Amborella trichopoda]1.7e-1770.59Show/hide
Query:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        A FLQDFRITWSDSHI Q  GG+AI+ VLDQ+SGCGFASKNQ+L  +VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

TrEMBL top hitse value%identityAlignment
A0A2R6PA58 Xyloglucan endotransglucosylase/hydrolase1.8e-1760.71Show/hide
Query:  HAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        H    L FSF V      FLQDF++TWSDSHI Q +GGTAI+ VLDQ SGCGFASK+Q+L  +VSMKI ++PG+S   VTAFY+
Subjt:  HAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

A0A6I9S320 Xyloglucan endotransglucosylase/hydrolase1.4e-1751.82Show/hide
Query:  APTILTSFAFNLCFVGLTLRQRSSHGHAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGN
        AP +L  F   L   G    + SS    F+ L  + +V    A FLQDFRITW+DSHI Q  GGTAI+  LDQ+SGCGFASK+Q+L  +VSMKI ++PG+
Subjt:  APTILTSFAFNLCFVGLTLRQRSSHGHAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGN

Query:  S---VTAFYV
        S   VTAFY+
Subjt:  S---VTAFYV

A0A7J0H723 Xyloglucan endotransglucosylase/hydrolase1.4e-1761.9Show/hide
Query:  HAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        H    L FSF V      FLQDF++TWSDSHI Q +GGTAI+ VLDQ SGCGFASK+Q+L  +VSMKI +VPG+S   VTAFY+
Subjt:  HAFYPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

M5ALB1 Xyloglucan endotransglucosylase/hydrolase1.4e-1761.73Show/hide
Query:  YPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        Y L FSFFV    A FLQDFR+TWSDSHI Q  GG+A++ +LDQ SGCGFAS  ++L  +VSMKI +VPG+S   VTAFY+
Subjt:  YPLVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

W1PKB6 Xyloglucan endotransglucosylase/hydrolase1.1e-1769.12Show/hide
Query:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        A FLQDFR+TWSDSHI Q  GG+AI+ VLDQ+SGCGFASKNQ+L  +VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

SwissProt top hitse value%identityAlignment
Q38857 Xyloglucan endotransglucosylase/hydrolase protein 228.8e-0940.79Show/hide
Query:  LVFSFFVAKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR
        ++ S   A F +D  ITW D      + G  +   LD++SG GF SKN++L  KVSM++ +VPGNS   VT  Y++
Subjt:  LVFSFFVAKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR

Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 231.1e-0841.25Show/hide
Query:  LVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR
        L+ SF +    A F +D  ITW D      + G  +   LD+ASG GF SKN++L  K+ M+I +V GNS   VTA+Y++
Subjt:  LVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR

Q8LER3 Probable xyloglucan endotransglucosylase/hydrolase protein 72.6e-1661.76Show/hide
Query:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        AKF  DFRI WSD+HI Q  GG AI+  LD +SGCGFASK Q+L  +VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

Q8LF99 Probable xyloglucan endotransglucosylase/hydrolase protein 62.8e-1555.88Show/hide
Query:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        A F++DF+  WS+SHI Q   G AI+ VLDQ++GCGFASK ++L  +VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

Q9ZV40 Probable xyloglucan endotransglucosylase/hydrolase protein 211.4e-0949.25Show/hide
Query:  FLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR
        F QD  ITW D   N  + GT +   LDQ+SG GF SK ++L  KV M+I +VPGNS   VT FY++
Subjt:  FLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR

Arabidopsis top hitse value%identityAlignment
AT2G18800.1 xyloglucan endotransglucosylase/hydrolase 219.6e-1149.25Show/hide
Query:  FLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR
        F QD  ITW D   N  + GT +   LDQ+SG GF SK ++L  KV M+I +VPGNS   VT FY++
Subjt:  FLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR

AT4G25810.1 xyloglucan endotransglycosylase 68.2e-1041.25Show/hide
Query:  LVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR
        L+ SF +    A F +D  ITW D      + G  +   LD+ASG GF SKN++L  K+ M+I +V GNS   VTA+Y++
Subjt:  LVFSFFV----AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR

AT4G37800.1 xyloglucan endotransglucosylase/hydrolase 71.8e-1761.76Show/hide
Query:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        AKF  DFRI WSD+HI Q  GG AI+  LD +SGCGFASK Q+L  +VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV

AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein6.3e-1040.79Show/hide
Query:  LVFSFFVAKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR
        ++ S   A F +D  ITW D      + G  +   LD++SG GF SKN++L  KVSM++ +VPGNS   VT  Y++
Subjt:  LVFSFFVAKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYVR

AT5G65730.1 xyloglucan endotransglucosylase/hydrolase 62.0e-1655.88Show/hide
Query:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV
        A F++DF+  WS+SHI Q   G AI+ VLDQ++GCGFASK ++L  +VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS---VTAFYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGAATAATGGTGATGGGGCAGCCATTGCATTGGCCCCCACAATCCTTACAAGTTTTGCCTTTAATCTTTGCTTCGTGGGTCTGACTCTGAGACAGCGAAGCAG
CCATGGCCACGCGTTTTACCCTCTCGTTTTTTCTTTTTTCGTCGCCAAATTTCTCCAAGATTTCAGGATTACGTGGTCCGATTCCCACATCAACCAACCCCACGGCGGAA
CAGCAATCCGTTTCGTTCTTGACCAGGCCTCCGGATGTGGGTTTGCTTCGAAGAACCAATTCCTGTTGGTTAAAGTCAGCATGAAGATCAATGTCGTACCGGGAAACTCT
GTCACTGCCTTCTACGTACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGAATAATGGTGATGGGGCAGCCATTGCATTGGCCCCCACAATCCTTACAAGTTTTGCCTTTAATCTTTGCTTCGTGGGTCTGACTCTGAGACAGCGAAGCAG
CCATGGCCACGCGTTTTACCCTCTCGTTTTTTCTTTTTTCGTCGCCAAATTTCTCCAAGATTTCAGGATTACGTGGTCCGATTCCCACATCAACCAACCCCACGGCGGAA
CAGCAATCCGTTTCGTTCTTGACCAGGCCTCCGGATGTGGGTTTGCTTCGAAGAACCAATTCCTGTTGGTTAAAGTCAGCATGAAGATCAATGTCGTACCGGGAAACTCT
GTCACTGCCTTCTACGTACGTTGA
Protein sequenceShow/hide protein sequence
MAMNNGDGAAIALAPTILTSFAFNLCFVGLTLRQRSSHGHAFYPLVFSFFVAKFLQDFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLVKVSMKINVVPGNS
VTAFYVR