| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6594716.1 DNA-directed RNA polymerases IV and V subunit 4, partial [Cucurbita argyrosperma subsp. sororia] | 8.4e-95 | 85.52 | Show/hide |
Query: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
MSEKGEKG+ KKPGK+SLKS A+KDA LKGKDD LS+ KKGRKVQFDAQG+ DAQIN S+KF+GKNGDL KGGK G KASV+KE QPLELKIEQEL
Subjt: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVLETLK++GV DSEICVIANVCPDT DEVFAL+PSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
Query: KGKLTEPLNNVLSELAKVKSS
+ KLTEPLNNVLSELAK+KSS
Subjt: KGKLTEPLNNVLSELAKVKSS
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| XP_022133315.1 DNA-directed RNA polymerases IV and V subunit 4-like [Momordica charantia] | 2.1e-114 | 100 | Show/hide |
Query: MSEKGEKGYLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPKNVK
MSEKGEKGYLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPKNVK
Subjt: MSEKGEKGYLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPKNVK
Query: CQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLT
CQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLT
Subjt: CQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLT
Query: EPLNNVLSELAKVKSS
EPLNNVLSELAKVKSS
Subjt: EPLNNVLSELAKVKSS
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| XP_022926857.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Cucurbita moschata] | 1.3e-92 | 83.71 | Show/hide |
Query: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
MSEKGEKG+ KKPGK+SLKS A+KDA LKGKDD LS+ KKGRKVQFDAQG+ DAQIN S+KF+GKNGDL KGGK G KASV+KE QPLELKIEQEL
Subjt: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIPTSFDRGL YAKRANHYVNTE VRPVLETLK++GV DSEICVIANVCPDT DEVF+L+PSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
Query: KGKLTEPLNNVLSELAKVKSS
+ KLTEPLNNVL ELAK+KSS
Subjt: KGKLTEPLNNVLSELAKVKSS
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| XP_023003382.1 DNA-directed RNA polymerases IV and V subunit 4-like [Cucurbita maxima] | 1.4e-94 | 85.97 | Show/hide |
Query: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
MSEKGEKG+ KKPGK+SLKS A+KDA LKGKDD LS+ KKGRKVQFDAQG+ DA IN SMKF GKNGDL KGGK G KASV+KE QPLELKIEQEL
Subjt: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVLETLK++GV DSEICVIANVCPDTIDEVFAL+PSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
Query: KGKLTEPLNNVLSELAKVKSS
+ KLTEPLNNVLSELAK+KSS
Subjt: KGKLTEPLNNVLSELAKVKSS
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| XP_023517145.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Cucurbita pepo subsp. pepo] | 5.4e-94 | 85.07 | Show/hide |
Query: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
MSEKGEKG+ KKPGK+SLKS A+KDA LKGKDD LS+ KKGRKVQFDAQG+ DAQIN S+KF+GKNGDL KGGK G KASV+KE QPLELKIE EL
Subjt: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVLETLK++GV DSEICVIANVCPDT DEVFAL+PSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
Query: KGKLTEPLNNVLSELAKVKSS
+ KLTEPLNNVLSELAK+KSS
Subjt: KGKLTEPLNNVLSELAKVKSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 1.4e-92 | 84.09 | Show/hide |
Query: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGA--KASVAKEPQPLELKIEQELP
MSEKGEKG+ KKP K+SLKS A KDA LKGKDD LS+ KKGRKVQFDAQG+ DA +FSMK++GKNGD+ KGGKGA KASVAKEPQ LELKIEQELP
Subjt: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGA--KASVAKEPQPLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKK
KNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGL YAKRANHYVN ESVRPVLETLK++G+TDSEICVIANVCPDT DEVFALLPSLK+K+
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKK
Query: GKLTEPLNNVLSELAKVKSS
KL+EPLNNVLSELAKVKSS
Subjt: GKLTEPLNNVLSELAKVKSS
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| A0A6J1BUW9 DNA-directed RNA polymerases IV and V subunit 4-like | 1.0e-114 | 100 | Show/hide |
Query: MSEKGEKGYLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPKNVK
MSEKGEKGYLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPKNVK
Subjt: MSEKGEKGYLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPKNVK
Query: CQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLT
CQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLT
Subjt: CQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLT
Query: EPLNNVLSELAKVKSS
EPLNNVLSELAKVKSS
Subjt: EPLNNVLSELAKVKSS
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| A0A6J1EJD9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 6.5e-93 | 83.71 | Show/hide |
Query: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
MSEKGEKG+ KKPGK+SLKS A+KDA LKGKDD LS+ KKGRKVQFDAQG+ DAQIN S+KF+GKNGDL KGGK G KASV+KE QPLELKIEQEL
Subjt: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIPTSFDRGL YAKRANHYVNTE VRPVLETLK++GV DSEICVIANVCPDT DEVF+L+PSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
Query: KGKLTEPLNNVLSELAKVKSS
+ KLTEPLNNVL ELAK+KSS
Subjt: KGKLTEPLNNVLSELAKVKSS
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| A0A6J1IMM9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 1.1e-92 | 84.4 | Show/hide |
Query: MSEKGEKG--YLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPKN
MSEKGEKG KKPGK+SLKS + KDA LKGKDD L +PKKGRKVQFDAQG+ DAQINFSMK++GKNG+L KGGKG S AKEPQPLELKIEQELPKN
Subjt: MSEKGEKG--YLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPKN
Query: VKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGK
VKCQCLMDCEAAQ+LQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVL+TLK++GV DSE+CV+ANVCPDT DEVFALLPSLKSK+ K
Subjt: VKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGK
Query: LTEPLNNVLSELAKVKSS
L+EPLNNVLSELAKVKSS
Subjt: LTEPLNNVLSELAKVKSS
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 6.9e-95 | 85.97 | Show/hide |
Query: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
MSEKGEKG+ KKPGK+SLKS A+KDA LKGKDD LS+ KKGRKVQFDAQG+ DA IN SMKF GKNGDL KGGK G KASV+KE QPLELKIEQEL
Subjt: MSEKGEKGY--LKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQINFSMKFTGKNGDLPKGGK---GAKASVAKEPQPLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVLETLK++GV DSEICVIANVCPDTIDEVFAL+PSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK
Query: KGKLTEPLNNVLSELAKVKSS
+ KLTEPLNNVLSELAK+KSS
Subjt: KGKLTEPLNNVLSELAKVKSS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15514 DNA-directed RNA polymerase II subunit RPB4 | 7.1e-04 | 28.07 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTE
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L Q + E+ +AN+CP+T +E AL+PSL+ + E
Subjt: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTE
Query: PLNNVLSELAKVKS
L +L ++ +S
Subjt: PLNNVLSELAKVKS
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| O48890 DNA-directed RNA polymerase II subunit 4 | 6.0e-19 | 37.31 | Show/hide |
Query: KEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDT
+E ELKI E +K +CLM+CE + +L+ +Q+ +S DP ++ F++ L Y KR + Y N ++VR V E L +H +T+ E+CV+ N+CP+T
Subjt: KEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDT
Query: IDEVFALLPSLKSK-KGKLTEPLNNVLSELAKVK
++E A++PSLK+K + E + +L++L+ VK
Subjt: IDEVFALLPSLKSK-KGKLTEPLNNVLSELAKVK
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 7.5e-06 | 32.91 | Show/hide |
Query: SFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTEPLNNVLSELAK
+F + L YA++ + Y N S++ V L + + + EI +AN+CP+ DE +L+PSLK + + + + LS L K
Subjt: SFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTEPLNNVLSELAK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 9.1e-36 | 44.75 | Show/hide |
Query: MSEKGEKGYLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQ---INFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPK
MSEKG KG K+SLKS KD GKD ++ KKGRK+ FD Q T A +N S K GK K + + + ++ ++LP+
Subjt: MSEKGEKGYLKKPGKTSLKSPATKDAPLKGKDDILSRPKKGRKVQFDAQGTGDAQ---INFSMKFTGKNGDLPKGGKGAKASVAKEPQPLELKIEQELPK
Query: NVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKG
N +C+MDCEA Q+L GI+ Q+V LS DP+IKIP S+DR L Y + HY N +SVR VLE LK +G++D E+CVIAN +++DEV A +PSLK+KK
Subjt: NVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKG
Query: KLTEPLNNVLSELAKVKSS
+ +PL + L EL+K+K S
Subjt: KLTEPLNNVLSELAKVKSS
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| Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 7.1e-04 | 28.07 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTE
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L Q + E+ +AN+CP+T +E AL+PSL+ + E
Subjt: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTE
Query: PLNNVLSELAKVKS
L +L ++ +S
Subjt: PLNNVLSELAKVKS
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