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Moc01g31280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g31280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCHCH domain-containing protein
Genome locationchr1:21931673..21932194
RNA-Seq ExpressionMoc01g31280
SyntenyMoc01g31280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142270.1 uncharacterized protein LOC111012432 [Momordica charantia]1.2e-76100Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLL
        MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLL
Subjt:  MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLL

Query:  RVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        RVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
Subjt:  RVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
XP_022949732.1 uncharacterized protein LOC111453037 [Cucurbita moschata]2.2e-4675.16Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS
        MISL P  + NGSSF   SSNL   L PI    SNF  PL T      K  FR   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLTIS
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS

Query:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        SLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
XP_022977984.1 uncharacterized protein LOC111478111 [Cucurbita maxima]4.9e-4674.51Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS
        MISL P  + NGSSF   SSNL   L PI    SNF  P  T      K  FR   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLTIS
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS

Query:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        SLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
XP_023544671.1 uncharacterized protein LOC111804184 [Cucurbita pepo subsp. pepo]1.7e-4674.51Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS
        MISL P  + NGSSF F SSNL   L PI    SNF  P  T      K  F+   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLTIS
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS

Query:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        SLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
XP_038881387.1 uncharacterized protein LOC120072922 [Benincasa hispida]7.6e-4773.55Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRP----IPSNFALPLPTNSIILGKRNFRFRVVRAEQAG--GNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT
        MISL P  + NGSSF + SSNL  N  P    I  NFA P  T +       FR    +AEQAG  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLT
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRP----IPSNFALPLPTNSIILGKRNFRFRVVRAEQAG--GNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT

Query:  ISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        ISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  ISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
TrEMBL top hitse value%identityAlignment
A0A0A0KHI4 Uncharacterized protein1.0e-4165.81Show/hide
Query:  MISLGPCAYQNG--SSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNF-----RFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT
        MISL P  + NG  +SFP Y+S+     PIP           I + K NF      FR        G   Q+RTFLT+EEAGLVEVSGLSTHERFLCRLT
Subjt:  MISLGPCAYQNG--SSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNF-----RFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT

Query:  ISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  ISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
A0A1U8EE61 uncharacterized protein LOC1078448525.9e-3779.21Show/hide
Query:  KRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDS
        ++  +  VVRA   G   ++RR+FLT+EEAGLVE+SGLSTHERFLCRLTISSLNLLRVIAE+E CSIEELNAGR+CDWFLKDKLKREQNLDSAVLQWDDS
Subjt:  KRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDS

Query:  D
        D
Subjt:  D
A0A6J1CKG5 uncharacterized protein LOC1110124325.8e-77100Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLL
        MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLL
Subjt:  MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLL

Query:  RVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        RVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
Subjt:  RVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
A0A6J1GCY7 uncharacterized protein LOC1114530371.1e-4675.16Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS
        MISL P  + NGSSF   SSNL   L PI    SNF  PL T      K  FR   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLTIS
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS

Query:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        SLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
A0A6J1ISV2 uncharacterized protein LOC1114781112.4e-4674.51Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS
        MISL P  + NGSSF   SSNL   L PI    SNF  P  T      K  FR   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLTIS
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTIS

Query:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        SLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21445.1 unknown protein1.2e-3475Show/hide
Query:  NSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
        N  +RR+FL++ EAGLVE+SGL  HE+FLCRLTISSLNLLRVI+E+E CSIEELNAG++CDWFLKDKLKRE N++SAVLQWDD D  F
Subjt:  NSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCACTCGGACCCTGCGCTTACCAAAATGGATCCTCATTTCCGTTCTACTCTTCAAATCTTCTAAATCTCCGTCCAATTCCTTCCAATTTTGCACTCCCACTCCC
AACAAACTCAATAATCCTCGGAAAAAGAAACTTCAGATTCAGAGTTGTTCGCGCCGAACAGGCCGGAGGAAACAGCGCTCAAAGACGAACTTTCTTGACGGTCGAAGAGG
CCGGCCTCGTCGAAGTATCCGGCCTCAGCACTCACGAGCGCTTTCTGTGTCGTTTGACGATATCGTCTCTGAATTTACTGCGAGTAATAGCGGAGGAAGAGAAATGTTCG
ATCGAGGAGTTGAATGCTGGCAGATTATGCGACTGGTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGGACTCCGCTGTTCTTCAATGGGATGATTCTGACCTGAC
CTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCACTCGGACCCTGCGCTTACCAAAATGGATCCTCATTTCCGTTCTACTCTTCAAATCTTCTAAATCTCCGTCCAATTCCTTCCAATTTTGCACTCCCACTCCC
AACAAACTCAATAATCCTCGGAAAAAGAAACTTCAGATTCAGAGTTGTTCGCGCCGAACAGGCCGGAGGAAACAGCGCTCAAAGACGAACTTTCTTGACGGTCGAAGAGG
CCGGCCTCGTCGAAGTATCCGGCCTCAGCACTCACGAGCGCTTTCTGTGTCGTTTGACGATATCGTCTCTGAATTTACTGCGAGTAATAGCGGAGGAAGAGAAATGTTCG
ATCGAGGAGTTGAATGCTGGCAGATTATGCGACTGGTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGGACTCCGCTGTTCTTCAATGGGATGATTCTGACCTGAC
CTTCTGA
Protein sequenceShow/hide protein sequence
MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIAEEEKCS
IEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF