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Moc01g32060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g32060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:22572971..22574129
RNA-Seq ExpressionMoc01g32060
SyntenyMoc01g32060
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]7.4e-2856.03Show/hide
Query:  GRGELLVKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKE
        G   L V++++   N E  LLNLDLLEE+R+ +QL+LAEYQ RMAR+YN R R RTF+ G L L+KV  HV AL+P WEGP+ V  +VRP  Y+L+DL  
Subjt:  GRGELLVKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKE

Query:  DVLAHPWNAEHLKRYY
          L HPWNAE L+ YY
Subjt:  DVLAHPWNAEHLKRYY

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]4.5e-3371Show/hide
Query:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP
        V++YE   NEEELLL LDL++E+R  AQLRLAEYQ +MARHYN+RVR R+FQ+G+LVLRKVQ HV  L+P+WEGPFEVKGIVRPGTY+LADL+  +L+HP
Subjt:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP

XP_022156271.1 uncharacterized protein LOC111023203 [Momordica charantia]2.6e-2555.45Show/hide
Query:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP
        V+++    N E LL+NLDLL E+R+ +QLRLAEY  RMA +YNARV+ R F+ G LVL+KV  HV AL P WEGP+ V  I+RP  Y+   L    L HP
Subjt:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP

Query:  WNAEHLKRYY
        WNAEHL+ YY
Subjt:  WNAEHLKRYY

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]3.2e-3161.82Show/hide
Query:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP
        V++++  AN E LL+NLDLLEE+R+ +QLRLAEYQ RMAR+YNARV+ RTF+   LVL+KV  HVGAL+P WEGP+ V  I+RP  Y+L+DL    L HP
Subjt:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP

Query:  WNAEHLKRYY
        WNAEHL+ YY
Subjt:  WNAEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]7.6e-4173.87Show/hide
Query:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP
        ++ YEP  NE ELLLNLDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  K+Q+HVG LDP+WE  FEVKGIVRPGTY+LADL+  VLAHP
Subjt:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP

Query:  WNAEHLKRYYP
        WNAEHLKRYYP
Subjt:  WNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A2N9IW26 Reverse transcriptase6.7e-2749.65Show/hide
Query:  RAEVNLAKVRSIGKLGGGRGEL--LVKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKV-----QTHVGALDP
        R+ + L K R  G  G    EL  ++  Y  T NEE+L LNLDL++E R  A+ R+  YQ +MARHYN+RV+PR   +G LVLRKV         G L P
Subjt:  RAEVNLAKVRSIGKLGGGRGEL--LVKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKV-----QTHVGALDP

Query:  TWEGPFEVKGIVRPGTYILADLKEDVLAHPWNAEHLKRYYP
         WEGP++V  + RPGTY L D+    L HPWNAEHL+RYYP
Subjt:  TWEGPFEVKGIVRPGTYILADLKEDVLAHPWNAEHLKRYYP

A0A6J1DP99 uncharacterized protein K02A2.6-like2.2e-3371Show/hide
Query:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP
        V++YE   NEEELLL LDL++E+R  AQLRLAEYQ +MARHYN+RVR R+FQ+G+LVLRKVQ HV  L+P+WEGPFEVKGIVRPGTY+LADL+  +L+HP
Subjt:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP

A0A6J1DS38 uncharacterized protein LOC1110230173.6e-2856.03Show/hide
Query:  GRGELLVKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKE
        G   L V++++   N E  LLNLDLLEE+R+ +QL+LAEYQ RMAR+YN R R RTF+ G L L+KV  HV AL+P WEGP+ V  +VRP  Y+L+DL  
Subjt:  GRGELLVKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKE

Query:  DVLAHPWNAEHLKRYY
          L HPWNAE L+ YY
Subjt:  DVLAHPWNAEHLKRYY

A0A6J1DWM2 Ribonuclease H1.5e-3161.82Show/hide
Query:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP
        V++++  AN E LL+NLDLLEE+R+ +QLRLAEYQ RMAR+YNARV+ RTF+   LVL+KV  HVGAL+P WEGP+ V  I+RP  Y+L+DL    L HP
Subjt:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP

Query:  WNAEHLKRYY
        WNAEHL+ YY
Subjt:  WNAEHLKRYY

A0A6J1DXL9 uncharacterized protein LOC1110254483.7e-4173.87Show/hide
Query:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP
        ++ YEP  NE ELLLNLDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  K+Q+HVG LDP+WE  FEVKGIVRPGTY+LADL+  VLAHP
Subjt:  VKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVRPGTYILADLKEDVLAHP

Query:  WNAEHLKRYYP
        WNAEHLKRYYP
Subjt:  WNAEHLKRYYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAGTATGAGGGCCGAGGTAAACCTGGCCAAGGTCCGATCTATCGGGAAGCTCGGTGGGGGCCGAGGTGAGCTACTAGTAAAGCATTACGAGCCTACAGCAAATGA
GGAAGAACTGCTCCTCAACCTCGACTTGCTGGAAGAAAGAAGAGCAATGGCCCAGCTACGTCTGGCGGAATATCAGGGCAGAATGGCCAGACACTACAACGCCCGCGTTC
GGCCTCGGACCTTCCAAGTCGGACATCTGGTCTTAAGGAAGGTCCAAACCCATGTGGGTGCCCTTGACCCGACCTGGGAGGGGCCGTTTGAGGTCAAGGGAATAGTCCGA
CCTGGGACATACATATTGGCCGATCTGAAAGAAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAGTATGAGGGCCGAGGTAAACCTGGCCAAGGTCCGATCTATCGGGAAGCTCGGTGGGGGCCGAGGTGAGCTACTAGTAAAGCATTACGAGCCTACAGCAAATGA
GGAAGAACTGCTCCTCAACCTCGACTTGCTGGAAGAAAGAAGAGCAATGGCCCAGCTACGTCTGGCGGAATATCAGGGCAGAATGGCCAGACACTACAACGCCCGCGTTC
GGCCTCGGACCTTCCAAGTCGGACATCTGGTCTTAAGGAAGGTCCAAACCCATGTGGGTGCCCTTGACCCGACCTGGGAGGGGCCGTTTGAGGTCAAGGGAATAGTCCGA
CCTGGGACATACATATTGGCCGATCTGAAAGAAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MLSMRAEVNLAKVRSIGKLGGGRGELLVKHYEPTANEEELLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRTFQVGHLVLRKVQTHVGALDPTWEGPFEVKGIVR
PGTYILADLKEDVLAHPWNAEHLKRYYP