; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g33000 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g33000
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr1:23202603..23205839
RNA-Seq ExpressionMoc01g33000
SyntenyMoc01g33000
Gene Ontology termsGO:0009765 - photosynthesis, light harvesting (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV83310.1 Chloroa_b-bind domain-containing protein, partial [Cephalotus follicularis]4.6e-10566.23Show/hide
Query:  VDQARVTQIVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLGEG------------------------------------
        +DQA V Q+V+ TL EDL S LEPHGL +L+ + GQ+L EDTTK  KHGPS VD+ ELTVLG+G                                    
Subjt:  VDQARVTQIVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLGEG------------------------------------

Query:  ---------------------------------------LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSI
                                               L VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSI
Subjt:  ---------------------------------------LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSI

Query:  LAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY
        LAIWA+QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY
Subjt:  LAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY

Query:  ATNFVPGK
        ATNFVPGK
Subjt:  ATNFVPGK

GER26026.1 chlorophyll a-b binding protein [Striga asiatica]2.0e-10852.34Show/hide
Query:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCV-------
        M+ Q+ Q  LS +NGL+E+P+HG+HG+P VLELLH +  +   VI Q Q V+A T V RVG+LT+  T NT+  +GAHQ++L  P GQ  LC        
Subjt:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCV-------

Query:  ----DQARVTQIVEPTLAEDLRSGLEPHG---------------------------------------------------------LAKLHPIAGQK---
               RV  +    L E L  G E  G                                                         +A     AG+K   
Subjt:  ----DQARVTQIVEPTLAEDLRSGLEPHG---------------------------------------------------------LAKLHPIAGQK---

Query:  ---------------LREDTTK--------SPKHGPSRVDHL------------------------------ELTVLGEGLGVIHSRWAMLGALGCVFPE
                       +R+ T+K        SP +GP RV +L                              E       L VIHSRWAMLGALGCVFPE
Subjt:  ---------------LREDTTK--------SPKHGPSRVDHL------------------------------ELTVLGEGLGVIHSRWAMLGALGCVFPE

Query:  LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN
        LL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKELKN
Subjt:  LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN

Query:  GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

KAF2314663.1 hypothetical protein GH714_028341 [Hevea brasiliensis]6.0e-13756.24Show/hide
Query:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCVDQARVTQ
        +V QVLQW+LS HNGLN+E +HGEH Q ++L+LLH Q SKC W++SQ QWVKASTWVD V  LTE  TG++V L+G HQH L CPDGQ+ALC+DQA VTQ
Subjt:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCVDQARVTQ

Query:  IVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLGEG--------------------------------------------
        +V+ TLAEDL S LEPHGLA+L  +A Q+L +D  K  KHGPS VDH ELTVLG+G                                            
Subjt:  IVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLGEG--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG
            L VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGG
Subjt:  ----LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG

Query:  SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

KHN25879.1 Chlorophyll a-b binding protein 3, chloroplastic [Glycine soja]3.1e-9380Show/hide
Query:  KLHPIAGQ----KLREDTTK-----SPKHGPSRVDHL-----------ELTVLGEGLGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSE
        KL P A +     +R+  TK     SP +GP RV +L           E       L VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSE
Subjt:  KLHPIAGQ----KLREDTTK-----SPKHGPSRVDHL-----------ELTVLGEGLGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSE

Query:  GGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
        GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Subjt:  GGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE

Query:  NLADHLADPVNNNAWAYATNFVPGK
        NLADHLADPVNNNAWAYATNFVPGK
Subjt:  NLADHLADPVNNNAWAYATNFVPGK

XP_009628754.2 uncharacterized protein LOC104119055 [Nicotiana tomentosiformis]7.3e-12753.75Show/hide
Query:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCVDQARVTQ
        +V +VLQWTLSS + LN+E KHG+H + ++L+LL+ + SK LWV S++QWV+ +T V  V + TE +T NTV L+ +HQHNL  P+GQ+ALCVDQ  V Q
Subjt:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCVDQARVTQ

Query:  IVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLG--------------EG------------------------------
        IV+ TLA++LRS LEP+ LAKL  +  Q+LREDTTKS KHGPS VDHL+LT+LG              EG                              
Subjt:  IVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLG--------------EG------------------------------

Query:  --------------------------------------------------------------------------------------------------LG
                                                                                                          L 
Subjt:  --------------------------------------------------------------------------------------------------LG

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLGEV DP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

TrEMBL top hitse value%identityAlignment
A0A1Q3CSV6 Chlorophyll a-b binding protein, chloroplastic (Fragment)2.2e-10566.23Show/hide
Query:  VDQARVTQIVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLGEG------------------------------------
        +DQA V Q+V+ TL EDL S LEPHGL +L+ + GQ+L EDTTK  KHGPS VD+ ELTVLG+G                                    
Subjt:  VDQARVTQIVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLGEG------------------------------------

Query:  ---------------------------------------LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSI
                                               L VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSI
Subjt:  ---------------------------------------LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSI

Query:  LAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY
        LAIWA+QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY
Subjt:  LAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY

Query:  ATNFVPGK
        ATNFVPGK
Subjt:  ATNFVPGK

A0A5A7NZT6 Chlorophyll a-b binding protein, chloroplastic9.7e-10952.34Show/hide
Query:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCV-------
        M+ Q+ Q  LS +NGL+E+P+HG+HG+P VLELLH +  +   VI Q Q V+A T V RVG+LT+  T NT+  +GAHQ++L  P GQ  LC        
Subjt:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCV-------

Query:  ----DQARVTQIVEPTLAEDLRSGLEPHG---------------------------------------------------------LAKLHPIAGQK---
               RV  +    L E L  G E  G                                                         +A     AG+K   
Subjt:  ----DQARVTQIVEPTLAEDLRSGLEPHG---------------------------------------------------------LAKLHPIAGQK---

Query:  ---------------LREDTTK--------SPKHGPSRVDHL------------------------------ELTVLGEGLGVIHSRWAMLGALGCVFPE
                       +R+ T+K        SP +GP RV +L                              E       L VIHSRWAMLGALGCVFPE
Subjt:  ---------------LREDTTK--------SPKHGPSRVDHL------------------------------ELTVLGEGLGVIHSRWAMLGALGCVFPE

Query:  LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN
        LL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKELKN
Subjt:  LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN

Query:  GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A5D3DAQ5 Chlorophyll a-b binding protein, chloroplastic3.7e-9299.41Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
        L VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A6A6K2V9 Chlorophyll a-b binding protein, chloroplastic2.8e-9286.43Show/hide
Query:  REDTTKSPKHGPSRVDHL----ELTVLGEGLGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVV
        R  ++ SP +GP RV +L    E       L VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVV
Subjt:  REDTTKSPKHGPSRVDHL----ELTVLGEGLGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVV

Query:  LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A6A6MR52 Chlorophyll a-b binding protein, chloroplastic2.9e-13756.24Show/hide
Query:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCVDQARVTQ
        +V QVLQW+LS HNGLN+E +HGEH Q ++L+LLH Q SKC W++SQ QWVKASTWVD V  LTE  TG++V L+G HQH L CPDGQ+ALC+DQA VTQ
Subjt:  MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCVDQARVTQ

Query:  IVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLGEG--------------------------------------------
        +V+ TLAEDL S LEPHGLA+L  +A Q+L +D  K  KHGPS VDH ELTVLG+G                                            
Subjt:  IVEPTLAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLGEG--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG
            L VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGG
Subjt:  ----LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGG

Query:  SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

SwissProt top hitse value%identityAlignment
P07371 Chlorophyll a-b binding protein AB80, chloroplastic5.5e-9395.86Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
        L VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYRIAGGPLGEV DP+YPGGSFDP
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P08221 Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment)5.0e-9498.22Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
        L VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P08222 Chlorophyll a-b binding protein of LHCII type 1 (Fragment)2.5e-9397.63Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
        L VIHS WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P09756 Chlorophyll a-b binding protein 3, chloroplastic1.9e-9397.63Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
        L VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P12331 Chlorophyll a-b binding protein 2, chloroplastic1.2e-9296.45Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP
        L VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGPLGEV DP+YPGGSFDP
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 34.9e-8991.18Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD
        L VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFD
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD

Query:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        PLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29920.1 chlorophyll A/B-binding protein 24.9e-8991.18Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD
        L VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFD
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD

Query:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        PLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29930.1 chlorophyll A/B binding protein 14.9e-8991.18Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD
        L VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFD
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD

Query:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        PLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34420.1 photosystem II light harvesting complex gene B1B22.9e-8991.76Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD
        L VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFD
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD

Query:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        PLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B12.9e-8991.76Show/hide
Query:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD
        L VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFD
Subjt:  LGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFD

Query:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        PLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGCCAAGTTCTCCAATGGACCCTTTCCAGTCACAATGGCCTGAACGAAGAACCCAAACATGGAGAACATGGCCAACCTTCCGTTCTTGAGCTCCTTCAC
TTTCAATTCAGCAAATGCCTCTGGGTCATCAGCCAAACCCAATGGGTCAAAGCTTCCACCTGGGTAGATCGGGTCGGTCACCTCACCGAGGGGACCACCGGCAAT
ACGGTAGCCCTCGACGGCGCCCATCAACACAACCTGAGATGCCCAGATGGCCAAAATGCTCTGTGCGTGGATCAAGCTAGGGTTACCCAAATAGTCGAGCCCACC
CTCGCTGAAGATCTGAGATCCGGCCTTGAACCACACGGCCTCGCCAAACTTCACCCCATTGCGGGACAGAAGCTCAGGGAAGACACAACCAAGAGCCCCAAGCAT
GGCCCATCTAGAGTGGATCACCTCGAGCTCACGGTTCTTGGCGAAGGTCTCGGGGTGATTCACTCTAGATGGGCCATGCTTGGGGCTCTTGGCTGTGTCTTCCCT
GAGCTTCTGTCCCGCAATGGGGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGTGGGCTCGACTATTTGGGCAACCCCAGC
TTGATCCACGCACAGAGCATTTTGGCCATCTGGGCATCTCAAGTCGTGTTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGTGGGCCGCTTGGCGAGGTGACC
GACCCGATCTACCCAGGTGGAAGCTTTGACCCATTGGGTTTGGCTGATGACCCAGAGGCATTTGCTGAATTGAAGGTGAAGGAGCTCAAGAATGGAAGGTTGGCC
ATGTTCTCCATGTTTGGGTTCTTCGTTCAGGCCATTGTGACTGGAAAGGGTCCATTGGAGAACTTGGCAGACCACCTTGCAGACCCAGTCAACAACAATGCCTGG
GCCTATGCCACAAACTTTGTTCCCGGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTGCCAAGTTCTCCAATGGACCCTTTCCAGTCACAATGGCCTGAACGAAGAACCCAAACATGGAGAACATGGCCAACCTTCCGTTCTTGAGCTCCTTCAC
TTTCAATTCAGCAAATGCCTCTGGGTCATCAGCCAAACCCAATGGGTCAAAGCTTCCACCTGGGTAGATCGGGTCGGTCACCTCACCGAGGGGACCACCGGCAAT
ACGGTAGCCCTCGACGGCGCCCATCAACACAACCTGAGATGCCCAGATGGCCAAAATGCTCTGTGCGTGGATCAAGCTAGGGTTACCCAAATAGTCGAGCCCACC
CTCGCTGAAGATCTGAGATCCGGCCTTGAACCACACGGCCTCGCCAAACTTCACCCCATTGCGGGACAGAAGCTCAGGGAAGACACAACCAAGAGCCCCAAGCAT
GGCCCATCTAGAGTGGATCACCTCGAGCTCACGGTTCTTGGCGAAGGTCTCGGGGTGATTCACTCTAGATGGGCCATGCTTGGGGCTCTTGGCTGTGTCTTCCCT
GAGCTTCTGTCCCGCAATGGGGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGTGGGCTCGACTATTTGGGCAACCCCAGC
TTGATCCACGCACAGAGCATTTTGGCCATCTGGGCATCTCAAGTCGTGTTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGTGGGCCGCTTGGCGAGGTGACC
GACCCGATCTACCCAGGTGGAAGCTTTGACCCATTGGGTTTGGCTGATGACCCAGAGGCATTTGCTGAATTGAAGGTGAAGGAGCTCAAGAATGGAAGGTTGGCC
ATGTTCTCCATGTTTGGGTTCTTCGTTCAGGCCATTGTGACTGGAAAGGGTCCATTGGAGAACTTGGCAGACCACCTTGCAGACCCAGTCAACAACAATGCCTGG
GCCTATGCCACAAACTTTGTTCCCGGAAAGTGA
Protein sequenceShow/hide protein sequence
MVCQVLQWTLSSHNGLNEEPKHGEHGQPSVLELLHFQFSKCLWVISQTQWVKASTWVDRVGHLTEGTTGNTVALDGAHQHNLRCPDGQNALCVDQARVTQIVEPT
LAEDLRSGLEPHGLAKLHPIAGQKLREDTTKSPKHGPSRVDHLELTVLGEGLGVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS
LIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW
AYATNFVPGK