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Moc01g33090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g33090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionhigh mobility group B protein 14
Genome locationchr1:23258134..23259982
RNA-Seq ExpressionMoc01g33090
SyntenyMoc01g33090
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR009071 - High mobility group box domain
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581419.1 High mobility group B protein 14, partial [Cucurbita argyrosperma subsp. sororia]7.9e-5388.89Show/hide
Query:  MKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
        MKRSA+  RF N++K  KTNK PKS +KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
Subjt:  MKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF

Query:  DKAMAEYKKRKESGIDEESEEDWEID
        DKAMAEYKKRKESG+D+ESEEDWEID
Subjt:  DKAMAEYKKRKESGIDEESEEDWEID

XP_004134634.1 high mobility group B protein 14 [Cucumis sativus]1.6e-5388.89Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
        MK +A+ASRFN+DKRAKT K+P SK+KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
Subjt:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD

Query:  KAMAEYKKRKESGIDEESEEDWEIDG
        KAM EYKKR ESGID+ESEEDW IDG
Subjt:  KAMAEYKKRKESGIDEESEEDWEIDG

XP_022146670.1 high mobility group B protein 14 isoform X1 [Momordica charantia]1.0e-60100Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
        MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
Subjt:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD

Query:  KAMAEYKKRKESGIDEESEEDWEIDG
        KAMAEYKKRKESGIDEESEEDWEIDG
Subjt:  KAMAEYKKRKESGIDEESEEDWEIDG

XP_023544425.1 high mobility group B protein 14 [Cucurbita pepo subsp. pepo]6.0e-5389.68Show/hide
Query:  MKRSARASRFNS-DKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
        MKRSA+A RFNS +K  KTNK PKS +KKKNDK D NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
Subjt:  MKRSARASRFNS-DKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF

Query:  DKAMAEYKKRKESGIDEESEEDWEID
        DKAMAEYKKRKESG+D+ESEEDWEID
Subjt:  DKAMAEYKKRKESGIDEESEEDWEID

XP_038881049.1 high mobility group B protein 14 isoform X1 [Benincasa hispida]1.6e-5389.68Show/hide
Query:  MKRSARASRFNSD-KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
        MKR+A+ASRFN+D KR KT K+PKSK+KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYYDIAT+KRAEF
Subjt:  MKRSARASRFNSD-KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF

Query:  DKAMAEYKKRKESGIDEESEEDWEID
        DKAMAEYKKRKESG+D+ESEEDWEID
Subjt:  DKAMAEYKKRKESGIDEESEEDWEID

TrEMBL top hitse value%identityAlignment
A0A0A0KKL8 HMG box domain-containing protein7.7e-5488.89Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
        MK +A+ASRFN+DKRAKT K+P SK+KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
Subjt:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD

Query:  KAMAEYKKRKESGIDEESEEDWEIDG
        KAM EYKKR ESGID+ESEEDW IDG
Subjt:  KAMAEYKKRKESGIDEESEEDWEIDG

A0A1S3AZW3 high mobility group B protein 144.2e-5287.4Show/hide
Query:  MKRSARASRFNSD-KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
        MK +A+ASRFN+D KR KT K+PKSK+KKKND+FD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
Subjt:  MKRSARASRFNSD-KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF

Query:  DKAMAEYKKRKESGIDEESEEDWEIDG
        DKAM EYKKR ESGI +ESEEDWEIDG
Subjt:  DKAMAEYKKRKESGIDEESEEDWEIDG

A0A6J1CXW3 high mobility group B protein 14 isoform X15.0e-61100Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
        MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
Subjt:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD

Query:  KAMAEYKKRKESGIDEESEEDWEIDG
        KAMAEYKKRKESGIDEESEEDWEIDG
Subjt:  KAMAEYKKRKESGIDEESEEDWEIDG

A0A6J1EJV4 high mobility group B protein 143.8e-5388.89Show/hide
Query:  MKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
        MKRSA+  RF N++K  KTNK PKS +KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
Subjt:  MKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF

Query:  DKAMAEYKKRKESGIDEESEEDWEID
        DKAMAEYKKRKESG+D+ESEEDWEID
Subjt:  DKAMAEYKKRKESGIDEESEEDWEID

A0A6J1IKU3 high mobility group B protein 149.4e-5287.3Show/hide
Query:  MKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF
        MKRSA+  RF N++K  KTNK PKS +KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACG+KWKTMTYEEKVQYYDIA EKRAEF
Subjt:  MKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEF

Query:  DKAMAEYKKRKESGIDEESEEDWEID
        DKAMAEYKKRKESG+D ESEEDWEID
Subjt:  DKAMAEYKKRKESGIDEESEEDWEID

SwissProt top hitse value%identityAlignment
O49595 High mobility group B protein 11.8e-1540.46Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATE
        +K +  A +   D++    K P  K       K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A +
Subjt:  MKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATE

Query:  KRAEFDKAMAEYKKRKESGIDEESEEDWEID
        ++AE++K M  Y K  E G DE  +   EI+
Subjt:  KRAEFDKAMAEYKKRKESGIDEESEEDWEID

O64702 High mobility group B protein 149.4e-3362.18Show/hide
Query:  RSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKA
        +S+  +R ++  R +  ++PK+  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR++GK CGEKWKTMTYEEKV+YYDIATEKR EF +A
Subjt:  RSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKA

Query:  MAEYKKRKESGIDEESEED
        M EY KR ESG  +ESE D
Subjt:  MAEYKKRKESGIDEESEED

P40619 HMG1/2-like protein3.0e-1540.35Show/hide
Query:  SRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYK
        S+  SD +    K+    +K K    D NKPK+PP+AFF F++DFRK ++E++P+ KS+  VGKA G+KWK +T  EK  +   A +++ E++K +  Y 
Subjt:  SRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYK

Query:  KRKESGIDEESEED
        K++ +G  EE E D
Subjt:  KRKESGIDEESEED

P40620 HMG1/2-like protein6.8e-1543.93Show/hide
Query:  KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKESG
        K A   K  K   K K  K D NKPK+PP+AFF F+ DFR+++++ +P+ KS+  VGKACGE+WK+++ EEK  Y D A +K+ E++  +  Y K+ E  
Subjt:  KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRKESG

Query:  IDEESEE
         DEE  +
Subjt:  IDEESEE

Q42344 High mobility group B protein 42.0e-1441.38Show/hide
Query:  ARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMA
        ++A   ++D+R KT      K+ KK    D N+PK+PP+AFF FL+DFRKEF   NP+ KS+  VGKA G +WK MT E+K  Y   A  ++ E+ K + 
Subjt:  ARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMA

Query:  EYKKRKESGIDEESEE
        +Y  +  SG + E ++
Subjt:  EYKKRKESGIDEESEE

Arabidopsis top hitse value%identityAlignment
AT2G34450.1 HMG-box (high mobility group) DNA-binding family protein6.7e-3462.18Show/hide
Query:  RSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKA
        +S+  +R ++  R +  ++PK+  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR++GK CGEKWKTMTYEEKV+YYDIATEKR EF +A
Subjt:  RSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKA

Query:  MAEYKKRKESGIDEESEED
        M EY KR ESG  +ESE D
Subjt:  MAEYKKRKESGIDEESEED

AT2G34450.2 HMG-box (high mobility group) DNA-binding family protein1.3e-3262.5Show/hide
Query:  RSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDV-GKACGEKWKTMTYEEKVQYYDIATEKRAEFDK
        +S+  +R ++  R +  ++PK+  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR+V GK CGEKWKTMTYEEKV+YYDIATEKR EF +
Subjt:  RSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDV-GKACGEKWKTMTYEEKVQYYDIATEKRAEFDK

Query:  AMAEYKKRKESGIDEESEED
        AM EY KR ESG  +ESE D
Subjt:  AMAEYKKRKESGIDEESEED

AT3G51880.1 high mobility group B11.3e-1640.46Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATE
        +K +  A +   D++    K P  K       K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A +
Subjt:  MKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATE

Query:  KRAEFDKAMAEYKKRKESGIDEESEEDWEID
        ++AE++K M  Y K  E G DE  +   EI+
Subjt:  KRAEFDKAMAEYKKRKESGIDEESEEDWEID

AT3G51880.2 high mobility group B11.3e-1640.46Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATE
        +K +  A +   D++    K P  K       K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A +
Subjt:  MKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATE

Query:  KRAEFDKAMAEYKKRKESGIDEESEEDWEID
        ++AE++K M  Y K  E G DE  +   EI+
Subjt:  KRAEFDKAMAEYKKRKESGIDEESEEDWEID

AT3G51880.3 high mobility group B11.3e-1640.46Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATE
        +K +  A +   D++    K P  K       K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A +
Subjt:  MKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATE

Query:  KRAEFDKAMAEYKKRKESGIDEESEEDWEID
        ++AE++K M  Y K  E G DE  +   EI+
Subjt:  KRAEFDKAMAEYKKRKESGIDEESEEDWEID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGTCAGCAAGAGCTAGTAGATTTAACTCGGACAAGAGAGCAAAGACAAATAAAGAACCAAAATCAAAGGAGAAGAAGAAGAATGATAAATTTGATGCAAATAA
ACCGAAGAAACCACCTACTGCTTTCTTTTACTTTTTGGATGACTTCCGCAAGGAATTTCAAGAACAGAATCCAGATGTCAAGTCAATGCGTGATGTTGGCAAGGCATGTG
GAGAGAAGTGGAAAACCATGACGTATGAGGAAAAAGTACAATATTATGATATTGCCACGGAGAAGCGTGCAGAGTTTGATAAAGCCATGGCAGAATATAAGAAGAGGAAG
GAAAGTGGAATAGATGAAGAATCTGAGGAAGATTGGGAGATTGATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGTCAGCAAGAGCTAGTAGATTTAACTCGGACAAGAGAGCAAAGACAAATAAAGAACCAAAATCAAAGGAGAAGAAGAAGAATGATAAATTTGATGCAAATAA
ACCGAAGAAACCACCTACTGCTTTCTTTTACTTTTTGGATGACTTCCGCAAGGAATTTCAAGAACAGAATCCAGATGTCAAGTCAATGCGTGATGTTGGCAAGGCATGTG
GAGAGAAGTGGAAAACCATGACGTATGAGGAAAAAGTACAATATTATGATATTGCCACGGAGAAGCGTGCAGAGTTTGATAAAGCCATGGCAGAATATAAGAAGAGGAAG
GAAAGTGGAATAGATGAAGAATCTGAGGAAGATTGGGAGATTGATGGATAG
Protein sequenceShow/hide protein sequence
MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYKKRK
ESGIDEESEEDWEIDG