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Moc01g33230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g33230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPHD finger transcription factor, putative
Genome locationchr1:23357207..23358163
RNA-Seq ExpressionMoc01g33230
SyntenyMoc01g33230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144627.1 uncharacterized protein LOC111014268 [Momordica charantia]1.7e-0644.44Show/hide
Query:  MTGCHSLG---------LCPFEWFVATLQTLDRTRR---------------------RESAAQNWKTASRLVDENVEVGSLEDTAFLALGIGALVDAWT
        MTGCHSL            P    +  LQ+L  T                       +ESAAQNWK  SRLV E VEV SLEDTAFLALGIGAL+   T
Subjt:  MTGCHSLG---------LCPFEWFVATLQTLDRTRR---------------------RESAAQNWKTASRLVDENVEVGSLEDTAFLALGIGALVDAWT
TrEMBL top hitse value%identityAlignment
A0A6J1CU72 uncharacterized protein LOC1110142688.2e-0744.44Show/hide
Query:  MTGCHSLG---------LCPFEWFVATLQTLDRTRR---------------------RESAAQNWKTASRLVDENVEVGSLEDTAFLALGIGALVDAWT
        MTGCHSL            P    +  LQ+L  T                       +ESAAQNWK  SRLV E VEV SLEDTAFLALGIGAL+   T
Subjt:  MTGCHSLG---------LCPFEWFVATLQTLDRTRR---------------------RESAAQNWKTASRLVDENVEVGSLEDTAFLALGIGALVDAWT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G58610.1 PHD finger transcription factor, putative2.2e-0444.23Show/hide
Query:  DTAFLALGIGALV-----DAWTEGVIFGSQQRRMQRRIFFLNLGDELEVGLR
        D A L L  G  V     DAW EGV+F  +    +RR+FF +LGDEL+  L+
Subjt:  DTAFLALGIGALV-----DAWTEGVIFGSQQRRMQRRIFFLNLGDELEVGLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGGCTGTCATTCGCTCGGCCTCTGCCCTTTTGAGTGGTTCGTTGCGACCTTGCAAACCCTAGATCGGACCAGGCGAAGAGAAAGCGCAGCGCAGAACTGGAAGAC
GGCTTCTCGTCTCGTTGATGAAAATGTAGAGGTGGGGAGTTTGGAAGACACGGCTTTCTTGGCTCTTGGCATAGGGGCACTGGTGGATGCATGGACGGAAGGTGTTATTT
TTGGTTCACAACAGAGGAGGATGCAGAGGAGGATTTTCTTTCTGAATTTGGGTGATGAATTGGAGGTTGGATTGAGATGGATTGGCAGAGATGTGGGACCTGGTCGTTTA
TTGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGGCTGTCATTCGCTCGGCCTCTGCCCTTTTGAGTGGTTCGTTGCGACCTTGCAAACCCTAGATCGGACCAGGCGAAGAGAAAGCGCAGCGCAGAACTGGAAGAC
GGCTTCTCGTCTCGTTGATGAAAATGTAGAGGTGGGGAGTTTGGAAGACACGGCTTTCTTGGCTCTTGGCATAGGGGCACTGGTGGATGCATGGACGGAAGGTGTTATTT
TTGGTTCACAACAGAGGAGGATGCAGAGGAGGATTTTCTTTCTGAATTTGGGTGATGAATTGGAGGTTGGATTGAGATGGATTGGCAGAGATGTGGGACCTGGTCGTTTA
TTGAGTTAA
Protein sequenceShow/hide protein sequence
MTGCHSLGLCPFEWFVATLQTLDRTRRRESAAQNWKTASRLVDENVEVGSLEDTAFLALGIGALVDAWTEGVIFGSQQRRMQRRIFFLNLGDELEVGLRWIGRDVGPGRL
LS