; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g34150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g34150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein LSD1
Genome locationchr1:24105922..24110224
RNA-Seq ExpressionMoc01g34150
SyntenyMoc01g34150
Gene Ontology termsGO:0007034 - vacuolar transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005768 - endosome (cellular component)
InterPro domainsIPR005735 - Zinc finger, LSD1-type
IPR040319 - LSD1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052452.1 vacuolar protein sorting-associated protein 2-like protein 2 [Cucumis melo var. makuwa]1.9e-8997.65Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRS+LLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAP TNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK
        KCAIC YVTNVGISNVRVPIPVHRRNGTISSGMPP+SSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK

XP_008439499.1 PREDICTED: protein LSD1 [Cucumis melo]3.8e-9097.66Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRS+LLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAP TNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAIC YVTNVGISNVRVPIPVHRRNGTISSGMPP+SSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

XP_011658526.1 vacuolar protein sorting-associated protein 2 homolog 2 [Cucumis sativus]3.8e-9097.66Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRS+LLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAP TNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAIC YVTNVGISNVRVPIPVHRRNGTISSGMPP+SSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

XP_022146603.1 protein LSD1 [Momordica charantia]5.2e-92100Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

XP_022925664.1 vacuolar protein sorting-associated protein 2 homolog 2-like [Cucurbita moschata]5.4e-8995.91Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRS+LLYPGGATNVCCALC+TVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAP TNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAIC YVTNVG+SNVRVPIPVHRRNGT+SSGMPP+SSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

TrEMBL top hitse value%identityAlignment
A0A0A0KJ18 Uncharacterized protein1.8e-9097.66Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRS+LLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAP TNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAIC YVTNVGISNVRVPIPVHRRNGTISSGMPP+SSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

A0A1S3AZJ7 protein LSD11.8e-9097.66Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRS+LLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAP TNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAIC YVTNVGISNVRVPIPVHRRNGTISSGMPP+SSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

A0A5A7U9M7 Vacuolar protein sorting-associated protein 2-like protein 29.0e-9097.65Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRS+LLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAP TNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK
        KCAIC YVTNVGISNVRVPIPVHRRNGTISSGMPP+SSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK

A0A6J1CZ01 protein LSD12.5e-92100Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

A0A6J1ECU7 vacuolar protein sorting-associated protein 2 homolog 2-like2.6e-8995.91Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRS+LLYPGGATNVCCALC+TVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAP TNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAIC YVTNVG+SNVRVPIPVHRRNGT+SSGMPP+SSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

SwissProt top hitse value%identityAlignment
P94077 Protein LSD11.2e-6266.84Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL P  +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+CQ+VTNV +SN RVP+P +R NGT     PP++S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

Q0J7V9 Protein LSD12.4e-4775.22Show/hide
Query:  QSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSVK
        QSQLVCSGCR++L+YP GAT+VCCA+C+TVT+VP PGT+MAQL+CGGC TLLMY RGATSV+CSCCHTVNLA   NQVAHVNCGNCR  L++ YGA SVK
Subjt:  QSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSVK

Query:  CAICQYVTNVGIS
        CA+C +VT+VG S
Subjt:  CAICQYVTNVGIS

Q2QMB3 Protein LOL29.1e-5562.72Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTS-VPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPS
        MQSQ+VC GCR++LLYP GA +VCCA+C+ V+S  P PG D+A LICGGCRTLLMY R ATSVRCSCC TVNL    + +AH+NCG C+T L++PYGAPS
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTS-VPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPS

Query:  VKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTT
        VKCAIC ++TN G++ +R  +P +  + T  S   P + SQ+ TVVVENPM+VD  GKLVSNVVVGVTT
Subjt:  VKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTT

Q6ASS2 Protein LOL31.1e-5560.22Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPG--TDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAP
        MQSQ+VC GCRS+L YP GA +VCCALC  +T+VPPP    +MA LICGGCRTLLMY R A +VRCSCC TVNL    N +AHV+CG CRTTL++PYGAP
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPG--TDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAP

Query:  SVKCAICQYVTNVGISNVR-VPIPVHRRNGTISSGMP-------------PASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK
        SVKCAIC Y+TN G++ V   P P+   +G+  +  P             P S  Q+ TVVVENPM+VDE GKLVSNVVVGVTT K
Subjt:  SVKCAICQYVTNVGISNVR-VPIPVHRRNGTISSGMP-------------PASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK

Q93ZB1 Protein LOL19.1e-4775.68Show/hide
Query:  QSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSVK
        QSQLVCSGCR++L+YP GAT+VCCA+CN VT+VPPPGT+MAQL+CGGC TLLMY RGATSV+CSCCHTVNLA   NQVAHVNCGNC   L++ YGA SVK
Subjt:  QSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSVK

Query:  CAICQYVTNVG
        CA+C +VT+VG
Subjt:  CAICQYVTNVG

Arabidopsis top hitse value%identityAlignment
AT4G20380.1 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL P  +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+CQ+VTNV +SN RVP+P +R NGT     PP++S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.2 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL P  +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+CQ+VTNV +SN RVP+P +R NGT     PP++S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.3 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL P  +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+CQ+VTNV +SN RVP+P +R NGT     PP++S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.4 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL P  +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+CQ+VTNV +SN RVP+P +R NGT     PP++S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.5 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL P  +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPV-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+CQ+VTNV +SN RVP+P +R NGT     PP++S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICQYVTNVGISNVRVPIPVHRRNGTISSGMPPASS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGCCAACTTGTATGCAGTGGGTGTAGGAGCATGCTTCTTTATCCTGGAGGAGCTACCAATGTATGCTGTGCATTATGCAATACAGTCACCTCGGTTCCT
CCTCCTGGAACGGATATGGCTCAACTTATATGTGGAGGTTGCAGGACATTGCTTATGTATGCACGTGGGGCAACAAGTGTTAGATGCTCCTGCTGTCATACAGTG
AACCTTGCACCTGTAACGAACCAGGTTGCGCATGTTAACTGTGGAAACTGCCGAACAACACTTGTCTTTCCATATGGAGCTCCATCTGTCAAGTGTGCGATCTGT
CAATATGTTACTAATGTTGGTATATCCAATGTGAGGGTTCCTATTCCAGTGCACAGGCGTAATGGAACAATTAGCTCTGGAATGCCTCCTGCATCATCATCTCAG
AGCCAAACTGTCGTAGTTGAGAACCCTATGTCTGTTGATGAAAGTGGCAAATTGGTGAGCAATGTTGTTGTCGGTGTGACAACAGATAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGCCAACTTGTATGCAGTGGGTGTAGGAGCATGCTTCTTTATCCTGGAGGAGCTACCAATGTATGCTGTGCATTATGCAATACAGTCACCTCGGTTCCT
CCTCCTGGAACGGATATGGCTCAACTTATATGTGGAGGTTGCAGGACATTGCTTATGTATGCACGTGGGGCAACAAGTGTTAGATGCTCCTGCTGTCATACAGTG
AACCTTGCACCTGTAACGAACCAGGTTGCGCATGTTAACTGTGGAAACTGCCGAACAACACTTGTCTTTCCATATGGAGCTCCATCTGTCAAGTGTGCGATCTGT
CAATATGTTACTAATGTTGGTATATCCAATGTGAGGGTTCCTATTCCAGTGCACAGGCGTAATGGAACAATTAGCTCTGGAATGCCTCCTGCATCATCATCTCAG
AGCCAAACTGTCGTAGTTGAGAACCCTATGTCTGTTGATGAAAGTGGCAAATTGGTGAGCAATGTTGTTGTCGGTGTGACAACAGATAAAAGGTAA
Protein sequenceShow/hide protein sequence
MQSQLVCSGCRSMLLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPVTNQVAHVNCGNCRTTLVFPYGAPSVKCAIC
QYVTNVGISNVRVPIPVHRRNGTISSGMPPASSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR