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Moc01g34740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g34740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:24597860..24598507
RNA-Seq ExpressionMoc01g34740
SyntenyMoc01g34740
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144033.1 uncharacterized protein LOC111013825 [Momordica charantia]3.2e-2238.89Show/hide
Query:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG------------------------------------
        GNK K LA EA  E+C+         ITF +    G+H PH D LVI   IDHV+V R+L+ GG                                    
Subjt:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG------------------------------------

Query:  -----------EHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALK
                   + Q ++M EFVV+   SAY AI GRP+IH  +VVPSTL Q +KY+T  GVG ++GEQKTS+EC A  LK
Subjt:  -----------EHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALK

XP_022150861.1 uncharacterized protein LOC111018906 [Momordica charantia]3.8e-2337.2Show/hide
Query:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG------------------------------------
        GNK K LA EA  E+C+         I+F +    G+H PH D LVI   IDHV+V R+L+ GG                                    
Subjt:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG------------------------------------

Query:  ---------------EHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPTCKAITGGSELPAIK
                       + Q+++M EFVV+   SAYNAI GRP+IH  + V STL Q +KY+T  GVG +RGEQKTS+ECYA ALK        GS   ++ 
Subjt:  ---------------EHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPTCKAITGGSELPAIK

Query:  SLDEQSS
        +L+EQ+S
Subjt:  SLDEQSS

XP_022154405.1 uncharacterized protein LOC111021682 [Momordica charantia]4.6e-2943.89Show/hide
Query:  NKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG-----------EHQISKMVEFVVVEATSAYNAISGRP
        NK K LA EA  E+C+         ITF +    G+H PH D LVI   IDHV+V R+L++GG           + Q+++M EFVV++  SAYNAI GRP
Subjt:  NKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG-----------EHQISKMVEFVVVEATSAYNAISGRP

Query:  VIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPTCKAITG---GSEL----PAIKSLDEQSSGEPAEDL
        +IH  +VVPST+ Q +KY+T  GVG +RGEQKT +ECYA ALK +     G   G EL      +  L ++    P E+L
Subjt:  VIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPTCKAITG---GSEL----PAIKSLDEQSSGEPAEDL

XP_022156175.1 uncharacterized protein LOC111023128 [Momordica charantia]2.5e-2238.71Show/hide
Query:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHG-------------------------------------
        GNK KAL  E SHE+  S+    +  I+F  D   G+H PH D LVI   ID++ V  +LI G                                     
Subjt:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHG-------------------------------------

Query:  --------------GEHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPT
                       ++++ K++EFV+V+  SAYNAI GRP IH+LQVVPST  Q MKY T  GV +I+GEQK S+ECYA ALK T
Subjt:  --------------GEHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPT

XP_022158414.1 uncharacterized protein LOC111024904 [Momordica charantia]5.1e-2850Show/hide
Query:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG-----------EHQISKMVEFVVVEATSAYNAISGR
        GNK K LA EA  E+C+         ITF +    G+H PH D LVI + IDH +V R+LI GG             Q+++M EFVV++  SAYNAI GR
Subjt:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG-----------EHQISKMVEFVVVEATSAYNAISGR

Query:  PVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALK
        P+IH  + VPSTL Q +KY+T   VG++RGEQKTS+ECYA ALK
Subjt:  PVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALK

TrEMBL top hitse value%identityAlignment
A0A6J1CS66 uncharacterized protein LOC1110138251.6e-2238.89Show/hide
Query:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG------------------------------------
        GNK K LA EA  E+C+         ITF +    G+H PH D LVI   IDHV+V R+L+ GG                                    
Subjt:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG------------------------------------

Query:  -----------EHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALK
                   + Q ++M EFVV+   SAY AI GRP+IH  +VVPSTL Q +KY+T  GVG ++GEQKTS+EC A  LK
Subjt:  -----------EHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALK

A0A6J1DCR3 uncharacterized protein LOC1110189061.8e-2337.2Show/hide
Query:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG------------------------------------
        GNK K LA EA  E+C+         I+F +    G+H PH D LVI   IDHV+V R+L+ GG                                    
Subjt:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG------------------------------------

Query:  ---------------EHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPTCKAITGGSELPAIK
                       + Q+++M EFVV+   SAYNAI GRP+IH  + V STL Q +KY+T  GVG +RGEQKTS+ECYA ALK        GS   ++ 
Subjt:  ---------------EHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPTCKAITGGSELPAIK

Query:  SLDEQSS
        +L+EQ+S
Subjt:  SLDEQSS

A0A6J1DJI4 uncharacterized protein LOC1110216822.2e-2943.89Show/hide
Query:  NKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG-----------EHQISKMVEFVVVEATSAYNAISGRP
        NK K LA EA  E+C+         ITF +    G+H PH D LVI   IDHV+V R+L++GG           + Q+++M EFVV++  SAYNAI GRP
Subjt:  NKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG-----------EHQISKMVEFVVVEATSAYNAISGRP

Query:  VIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPTCKAITG---GSEL----PAIKSLDEQSSGEPAEDL
        +IH  +VVPST+ Q +KY+T  GVG +RGEQKT +ECYA ALK +     G   G EL      +  L ++    P E+L
Subjt:  VIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPTCKAITG---GSEL----PAIKSLDEQSSGEPAEDL

A0A6J1DPJ9 uncharacterized protein LOC1110231281.2e-2238.71Show/hide
Query:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHG-------------------------------------
        GNK KAL  E SHE+  S+    +  I+F  D   G+H PH D LVI   ID++ V  +LI G                                     
Subjt:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHG-------------------------------------

Query:  --------------GEHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPT
                       ++++ K++EFV+V+  SAYNAI GRP IH+LQVVPST  Q MKY T  GV +I+GEQK S+ECYA ALK T
Subjt:  --------------GEHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALKPT

A0A6J1DZB9 uncharacterized protein LOC1110249042.5e-2850Show/hide
Query:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG-----------EHQISKMVEFVVVEATSAYNAISGR
        GNK K LA EA  E+C+         ITF +    G+H PH D LVI + IDH +V R+LI GG             Q+++M EFVV++  SAYNAI GR
Subjt:  GNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGG-----------EHQISKMVEFVVVEATSAYNAISGR

Query:  PVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALK
        P+IH  + VPSTL Q +KY+T   VG++RGEQKTS+ECYA ALK
Subjt:  PVIHDLQVVPSTLSQAMKYTTSKGVGVIRGEQKTSKECYAVALK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACAAGCATAAGGCGCTAGCACTAGAAGCCAGCCATGAATTGTGCGTGAGCTTCACGCTGCACGTCCTCTACCAGATCACATTCTTGGAGGACATTACGAGGGG
CCTGCACAACCCACACAAAGACACCTTGGTCATCGAAGCTCAGATCGACCACGTGATGGTTTGGCGCATATTGATCCATGGAGGGGAGCACCAAATCTCAAAGATGGTCG
AATTTGTGGTGGTTGAAGCCACATCGGCATATAACGCGATATCCGGTCGGCCTGTCATCCATGACCTCCAAGTTGTGCCATCTACACTATCTCAAGCAATGAAGTACACA
ACTTCCAAGGGAGTAGGAGTGATACGAGGCGAGCAAAAGACATCAAAGGAATGCTACGCGGTAGCCCTCAAACCAACCTGCAAAGCAATCACCGGTGGCTCAGAGCTCCC
AGCGATTAAGTCACTTGACGAGCAGAGCAGCGGAGAGCCCGCGGAAGACCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACAAGCATAAGGCGCTAGCACTAGAAGCCAGCCATGAATTGTGCGTGAGCTTCACGCTGCACGTCCTCTACCAGATCACATTCTTGGAGGACATTACGAGGGG
CCTGCACAACCCACACAAAGACACCTTGGTCATCGAAGCTCAGATCGACCACGTGATGGTTTGGCGCATATTGATCCATGGAGGGGAGCACCAAATCTCAAAGATGGTCG
AATTTGTGGTGGTTGAAGCCACATCGGCATATAACGCGATATCCGGTCGGCCTGTCATCCATGACCTCCAAGTTGTGCCATCTACACTATCTCAAGCAATGAAGTACACA
ACTTCCAAGGGAGTAGGAGTGATACGAGGCGAGCAAAAGACATCAAAGGAATGCTACGCGGTAGCCCTCAAACCAACCTGCAAAGCAATCACCGGTGGCTCAGAGCTCCC
AGCGATTAAGTCACTTGACGAGCAGAGCAGCGGAGAGCCCGCGGAAGACCTATAG
Protein sequenceShow/hide protein sequence
MGNKHKALALEASHELCVSFTLHVLYQITFLEDITRGLHNPHKDTLVIEAQIDHVMVWRILIHGGEHQISKMVEFVVVEATSAYNAISGRPVIHDLQVVPSTLSQAMKYT
TSKGVGVIRGEQKTSKECYAVALKPTCKAITGGSELPAIKSLDEQSSGEPAEDL