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Moc01g34760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g34760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr1:24614901..24617931
RNA-Seq ExpressionMoc01g34760
SyntenyMoc01g34760
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019229044.1 PREDICTED: uncharacterized protein LOC109210130 [Nicotiana attenuata]3.6e-0553.06Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTH----VGAFEPNWKDPYMIREVV
        MAR +N +VKPR FKPG LVLK++  H     G F PNW+ PYM+  V+
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTH----VGAFEPNWKDPYMIREVV

XP_019246441.1 PREDICTED: uncharacterized protein LOC109226092 [Nicotiana attenuata]2.1e-0553.06Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTH----VGAFEPNWKDPYMIREVV
        MAR +N +VKPR FKPG LVLK++  H     G F PNW+ PYM+ +V+
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTH----VGAFEPNWKDPYMIREVV

XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]3.5e-0853.85Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY
        MARYYN R + R FKPGDL LKKV+ HV A EPNW+ PY + +VV +PR  L   L+   L  P+
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY

XP_022156271.1 uncharacterized protein LOC111023203 [Momordica charantia]4.1e-0953.85Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY
        MA YYN RVK R+FKPGDLVLKKV+ HV A +PNW+ PY + E++ +PR  L   L+   L  P+
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]4.8e-1055.38Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY
        MARYYN RVK R FKP DLVLKKV+ HVGA EPNW+ PY + +++ +PR  L   L+   L  P+
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY

TrEMBL top hitse value%identityAlignment
A0A1U7WVW0 uncharacterized protein LOC1042325185.1e-0537.63Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTH----VGAFEPNWKDPYMIREVVC--------QPRPLLRHPLHPATLHRPYRLNTSKAQGRASSLHP
        M+R +N RVKPR F PG LVLKK+ +H     G F P+W+ PYM+  V+           R +   P++   + R +RL    A  R SS  P
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTH----VGAFEPNWKDPYMIREVVC--------QPRPLLRHPLHPATLHRPYRLNTSKAQGRASSLHP

A0A6J1DS38 uncharacterized protein LOC1110230171.7e-0853.85Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY
        MARYYN R + R FKPGDL LKKV+ HV A EPNW+ PY + +VV +PR  L   L+   L  P+
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY

A0A6J1DUF4 uncharacterized protein LOC1110232032.0e-0953.85Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY
        MA YYN RVK R+FKPGDLVLKKV+ HV A +PNW+ PY + E++ +PR  L   L+   L  P+
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY

A0A6J1DVB6 uncharacterized protein LOC1110234363.0e-0542.31Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTHV-----GAFEPNWKDPYMIREVV--------CQPRPLLRHPLHPATLHRPY
        +ARYYN +VK R FK GDLVL+K++ +      GAF P W+ PY + +VV         Q    L HP H   L R Y
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTHV-----GAFEPNWKDPYMIREVV--------CQPRPLLRHPLHPATLHRPY

A0A6J1DWM2 Ribonuclease H2.3e-1055.38Show/hide
Query:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY
        MARYYN RVK R FKP DLVLKKV+ HVGA EPNW+ PY + +++ +PR  L   L+   L  P+
Subjt:  MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCGATACTACAACGGCAGAGTTAAGCCTCGAGTGTTCAAACCAGGAGACCTCGTCTTGAAGAAGGTCCTGACCCATGTGGGAGCATTCGAGCCCAACTGGAAAGA
TCCATACATGATACGAGAAGTGGTTTGTCAGCCTAGACCTCTCCTTCGTCATCCTCTTCATCCAGCTACGCTTCATAGGCCTTATAGATTGAATACAAGTAAAGCTCAGG
GGCGAGCTTCCTCACTCCATCCATGGCAAAGTCGAAGCTTCAGTTGGCGTCACCAGATCGCTGAACTCTGGCAAAACTCGGATGGCATTCTCCAACTCGTTGAAGGACGA
CCACTTATTCGCCTAAGCCACTTGCTCAACCCTCAGTGTGTCCATCGCCTTGTTTGCCTGCAAGCAGGAAATCAAGTTTGTAATTTAAGAAAAGCATTGTATGGAATAAA
GCAATCTTCAAGGGGTCAGCGCGGTCAACTGAGTCAATGTCATCTGATCCCTTCGCCATTACCAAGCTCCAGCAAGGGAATGGCTAGCGCCATTATAGTTCTCCATGTGT
TGGGGGCGAGTTGTGTCGGCGCGACTCCAGCGTGGGACATAAAAGACTGGGTGAAAAGAGAAAGCGAGAGCCGATCTCCATTCCAAAACATCTGGGGCCATAAAGAGGCG
CAGGACCACAGGCGATTACACACCGTACACTTCGATGTTAGGGGGGACGTGCCTCCACTCAAACGGTATGGGGAGCACGACTTGGCCTGCGACCTGCTAGTGGCAACTGG
TAGGCTCCAGGCTTGCAGGTCGAGGCACGATCCACCAATTGTCAGGGACGTACACCCCCCGTCAGGCGTCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCGATACTACAACGGCAGAGTTAAGCCTCGAGTGTTCAAACCAGGAGACCTCGTCTTGAAGAAGGTCCTGACCCATGTGGGAGCATTCGAGCCCAACTGGAAAGA
TCCATACATGATACGAGAAGTGGTTTGTCAGCCTAGACCTCTCCTTCGTCATCCTCTTCATCCAGCTACGCTTCATAGGCCTTATAGATTGAATACAAGTAAAGCTCAGG
GGCGAGCTTCCTCACTCCATCCATGGCAAAGTCGAAGCTTCAGTTGGCGTCACCAGATCGCTGAACTCTGGCAAAACTCGGATGGCATTCTCCAACTCGTTGAAGGACGA
CCACTTATTCGCCTAAGCCACTTGCTCAACCCTCAGTGTGTCCATCGCCTTGTTTGCCTGCAAGCAGGAAATCAAGTTTGTAATTTAAGAAAAGCATTGTATGGAATAAA
GCAATCTTCAAGGGGTCAGCGCGGTCAACTGAGTCAATGTCATCTGATCCCTTCGCCATTACCAAGCTCCAGCAAGGGAATGGCTAGCGCCATTATAGTTCTCCATGTGT
TGGGGGCGAGTTGTGTCGGCGCGACTCCAGCGTGGGACATAAAAGACTGGGTGAAAAGAGAAAGCGAGAGCCGATCTCCATTCCAAAACATCTGGGGCCATAAAGAGGCG
CAGGACCACAGGCGATTACACACCGTACACTTCGATGTTAGGGGGGACGTGCCTCCACTCAAACGGTATGGGGAGCACGACTTGGCCTGCGACCTGCTAGTGGCAACTGG
TAGGCTCCAGGCTTGCAGGTCGAGGCACGATCCACCAATTGTCAGGGACGTACACCCCCCGTCAGGCGTCATGTAG
Protein sequenceShow/hide protein sequence
MARYYNGRVKPRVFKPGDLVLKKVLTHVGAFEPNWKDPYMIREVVCQPRPLLRHPLHPATLHRPYRLNTSKAQGRASSLHPWQSRSFSWRHQIAELWQNSDGILQLVEGR
PLIRLSHLLNPQCVHRLVCLQAGNQVCNLRKALYGIKQSSRGQRGQLSQCHLIPSPLPSSSKGMASAIIVLHVLGASCVGATPAWDIKDWVKRESESRSPFQNIWGHKEA
QDHRRLHTVHFDVRGDVPPLKRYGEHDLACDLLVATGRLQACRSRHDPPIVRDVHPPSGVM