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Moc01g34850 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g34850
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr1:24684981..24692087
RNA-Seq ExpressionMoc01g34850
SyntenyMoc01g34850
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]8.6e-2271.79Show/hide
Query:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL
        FVL E+CPQA  PNA  A R+ YDRWIK N K KVYIL+SIS+VLAKKHE  VT ++IMDSLQ MFGQPS QARH+AL
Subjt:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL

XP_022155999.1 uncharacterized protein LOC111022974 [Momordica charantia]1.5e-2180Show/hide
Query:  QALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL
        +A LPNAARASRD YDRWIK N K KVYILASIS+VLAKKHE+MV  ++IMDSL+DMFGQPSIQARH+AL
Subjt:  QALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL

XP_022156751.1 uncharacterized protein LOC111023591 [Momordica charantia]8.9e-2782.05Show/hide
Query:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL
        FVLTE+CPQA   NAARAS+D YDRWIK N K K+YILA+ISNVLAKKH+SMVT R+IMDSLQDMFGQPSIQARHDAL
Subjt:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL

XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]6.4e-2579.49Show/hide
Query:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL
        F+LTEECPQA  PNAARASRD YDRWIK N K  VYIL SIS+VL+KKHESMVT R+IMDSLQD+F Q SIQARHDAL
Subjt:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]5.1e-2273.08Show/hide
Query:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL
        FVL E+CPQA + NA  A R+ YDRWIK N K KVYILASIS+VLAKKHE  VTT++IMDSLQ MFGQPS+QARH+AL
Subjt:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL

TrEMBL top hitse value%identityAlignment
A0A6J1DMS3 uncharacterized protein LOC1110220004.2e-2271.79Show/hide
Query:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL
        FVL E+CPQA  PNA  A R+ YDRWIK N K KVYIL+SIS+VLAKKHE  VT ++IMDSLQ MFGQPS QARH+AL
Subjt:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL

A0A6J1DVX8 uncharacterized protein LOC1110235914.3e-2782.05Show/hide
Query:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL
        FVLTE+CPQA   NAARAS+D YDRWIK N K K+YILA+ISNVLAKKH+SMVT R+IMDSLQDMFGQPSIQARHDAL
Subjt:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL

A0A6J1DWI4 uncharacterized protein LOC1110241453.1e-2579.49Show/hide
Query:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL
        F+LTEECPQA  PNAARASRD YDRWIK N K  VYIL SIS+VL+KKHESMVT R+IMDSLQD+F Q SIQARHDAL
Subjt:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL

A0A6J1DWL0 uncharacterized protein LOC1110247342.4e-2273.08Show/hide
Query:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL
        FVL E+CPQA + NA  A R+ YDRWIK N K KVYILASIS+VLAKKHE  VTT++IMDSLQ MFGQPS+QARH+AL
Subjt:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL

A0A6J1DWL4 uncharacterized protein LOC1110247397.1e-2278.08Show/hide
Query:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQA
        FVLTEEC Q   PNA RASRD YDRWIK N K KVYI ASIS+VLAKKH+ MVTTR+IMDSL+DMFGQ SIQA
Subjt:  FVLTEECPQALLPNAARASRDIYDRWIKVNYKTKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCCGACAATCAACAGCGGCTGGCGTGTTCTCCGACCTGCAGCAGCTCGGACGACGACGTTTCTCCCTCAGCAACTACGTCGTTCCTCTGGCTGCGTAGT
AGCAATGCGCCTAGATGCCTAAATCCGCGAACGACAGGTGCTTTCCTTCAACGATTCATGAACAACGGTGTTTCGGTGACTTGTGACGGTCTATTAGGTCTCCTT
GCTAGCTCGTTCGTCTTAACTGAGGAGTGTCCTCAGGCTCTCTTGCCTAATGCAGCCCGAGCTAGTCGGGATATATATGACAGATGGATCAAAGTCAATTACAAG
ACCAAAGTCTACATCTTGGCAAGCATATCTAATGTGCTGGCCAAAAAGCATGAGAGCATGGTCACCACAAGGAAGATCATGGACTCATTACAGGACATGTTTGGA
CAACCGTCCATTCAAGCCCGACATGATGCACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTATCCGACAATCAACAGCGGCTGGCGTGTTCTCCGACCTGCAGCAGCTCGGACGACGACGTTTCTCCCTCAGCAACTACGTCGTTCCTCTGGCTGCGTAGT
AGCAATGCGCCTAGATGCCTAAATCCGCGAACGACAGGTGCTTTCCTTCAACGATTCATGAACAACGGTGTTTCGGTGACTTGTGACGGTCTATTAGGTCTCCTT
GCTAGCTCGTTCGTCTTAACTGAGGAGTGTCCTCAGGCTCTCTTGCCTAATGCAGCCCGAGCTAGTCGGGATATATATGACAGATGGATCAAAGTCAATTACAAG
ACCAAAGTCTACATCTTGGCAAGCATATCTAATGTGCTGGCCAAAAAGCATGAGAGCATGGTCACCACAAGGAAGATCATGGACTCATTACAGGACATGTTTGGA
CAACCGTCCATTCAAGCCCGACATGATGCACTCTAG
Protein sequenceShow/hide protein sequence
MLSDNQQRLACSPTCSSSDDDVSPSATTSFLWLRSSNAPRCLNPRTTGAFLQRFMNNGVSVTCDGLLGLLASSFVLTEECPQALLPNAARASRDIYDRWIKVNYK
TKVYILASISNVLAKKHESMVTTRKIMDSLQDMFGQPSIQARHDAL