CuGenDBv2

Gene ID	Moc02g00410
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	chr2:311601..315921
RNA-Seq Expression	Moc02g00410
Synteny	Moc02g00410
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006301 - postreplication repair (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022153726.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Momordica charantia]

2.8e-157

100

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQ
        LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQ
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQ

XP_022153728.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Momordica charantia]

4.6e-168

100

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQRDAFSFFFWGQRDALFS
        LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQRDAFSFFFWGQRDALFS
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQRDAFSFFFWGQRDALFS

XP_022153729.1 non-structural maintenance of chromosomes element 1 homolog isoform X3 [Momordica charantia]

7.3e-158

100

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR
        LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR

XP_022995422.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima]

7.6e-139

88.15

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        +FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQPPPETRRVTRSSARQR
        LSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQPPP+TRR+TRSSA QR
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQPPPETRRVTRSSARQR

XP_022995424.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima]

7.6e-139

88.15

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        +FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQPPPETRRVTRSSARQR
        LSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQPPP+TRR+TRSSA QR
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQPPPETRRVTRSSARQR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

2.2e-168

100

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQRDAFSFFFWGQRDALFS
        LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQRDAFSFFFWGQRDALFS
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQRDAFSFFFWGQRDALFS

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

3.6e-158

100

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR
        LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR

A0A6J1DLJ6 Non-structural maintenance of chromosomes element 1 homolog

1.4e-157

100

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQ
        LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQ
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQ

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

3.7e-139

88.15

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        +FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQPPPETRRVTRSSARQR
        LSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQPPP+TRR+TRSSA QR
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQPPPETRRVTRSSARQR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

3.7e-139

88.15

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        +FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKM
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQPPPETRRVTRSSARQR
        LSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQPPP+TRR+TRSSA QR
Subjt:  LSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQPPPETRRVTRSSARQR

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

1.6e-06

22.17

Show/hide

Query:  NNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPP
        ++++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G    I+ L+L  E Q   M  +       
Subjt:  NNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPP

Query:  AFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCG
                  E+ +    QD+WL    +G   L  R  ++L  +      D+   C VC++  ++ +LC+N  C + +H  C   +     +   CP C 
Subjt:  AFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCG

Query:  TKWRSTVTNMESKEEEDEPDRRTQGQSSSQ
          W   + ++            +QG S SQ
Subjt:  TKWRSTVTNMESKEEEDEPDRRTQGQSSSQ

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

1.3e-08

22.86

Show/hide

Query:  DGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNC
        DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G  ++I+ L+L  E Q   M  +                 E+ +    Q++WL  
Subjt:  DGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNC

Query:  TPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQG
          +G   L  R  ++L  + R    D+   C VC +  ++++LC+N  C + +H  C  K   + K+   CP C   W   + ++     +     +T+ 
Subjt:  TPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQG

Query:  QSSSQRRKKS
             +R K+
Subjt:  QSSSQRRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

1.2e-84

54.74

Show/hide

Query:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL
        +FT +TG++P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF+K I+EAIAQD +AQG IS+  AL+++L
Subjt:  MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQL

Query:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM
        ENQ+    S S Q +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+RS LDLRSWFR ND+PSCEVCNEAGVKA+LC  EGC VR+H+YCLKK+
Subjt:  ENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKM

Query:  LSNKKSKRACPGCGTKW-RSTVTNMESKEE--EDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR
        LS +  KR C GCG  W  S +T  E+ EE   DE +  TQ  +   +R++ + +   +  S  + AS     TRRVTRS    R
Subjt:  LSNKKSKRACPGCGTKW-RSTVTNMESKEE--EDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTTACGCGCATCACTGGAAAGAGCCCAGATAATGACCAGCAGCTGTTTAATAATTACCTCCTGGCGATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTG
AGAGGCTGCAGAAACCAATATGACGGTCGTGTTTATTATGGCTTGGTCAATAATGTATCTGACGAGCAATCCAAACTGGGAACAAAATATTCAGTTCCACAGATT
GCCTTCTACAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGAGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGG
GATATGGGGTCCCAGTCGTCTCAAGTCATCCCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCTGAGCTTGCACAGGATCAGTGGCTT
AACTGCACTCCTGATGGTTTTGTAAATCTGGGTGTCAGATCGTTTCTTGATCTGCGAAGTTGGTTCCGCACTAATGATATACCTTCATGCGAAGTGTGCAACGAG
GCTGGAGTGAAGGCAGAGTTGTGCGATAATGAAGGTTGCACTGTCCGTGTACATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGC
CCAGGTTGTGGCACTAAATGGCGATCTACAGTAACCAATATGGAGTCCAAGGAAGAAGAGGATGAGCCAGATAGGCGCACTCAAGGCCAGTCATCATCACAGAGA
AGGAAGAAATCTAGATTGAACATAGACATGGATTCAGATTCAAATGGAGCCAGTGCTTCCCAACCTCCTCCAGAGACAAGGAGAGTAACGCGAAGTTCTGCCCGC
CAGAGGGATGCTTTTTCTTTCTTTTTTTGGGGGCAAAGGGATGCTTTGTTTTCCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLG
DMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRAC
PGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQRDAFSFFFWGQRDALFS

Moc02g00410 (gene) of Bitter gourd (OHB3-1) v2 genome