; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g01730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g01730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4283 domain-containing protein
Genome locationchr2:1291044..1295785
RNA-Seq ExpressionMoc02g01730
SyntenyMoc02g01730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-1639.26Show/hide
Query:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS
        N  ST G  +V+  +W+    SF  V+PSYG W++ R IPLHLW+  TF+ IG+A GGFLD A     +   ++  +KV+ NY GF+PA I + D   ++
Subjt:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS

Query:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ
        F    V    A +L  + + +HG F  +AA  F Q
Subjt:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ

KAA0067710.1 hypothetical protein E6C27_scaffold352G00160 [Cucumis melo var. makuwa]1.8e-1630.08Show/hide
Query:  KSFKQERKLLELTKVQSSGGKKNIVVPSDEDYKGWATFRKLL---IDFLNEE--KSIKNGTVGSPSPSEIRPRALKQKSFADVLRAKEQKADKQTMTFSP
        K++ ++  + E+ +V   G K  I+VP   +  GWA F  LL    D   +E  K++    +     S       K++S+A  +  K   +D++T     
Subjt:  KSFKQERKLLELTKVQSSGGKKNIVVPSDEDYKGWATFRKLL---IDFLNEE--KSIKNGTVGSPSPSEIRPRALKQKSFADVLRAKEQKADKQTMTFSP

Query:  PWNV---LSTAGETEVRSL-----NWELWRSF----------------VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVAL
        P++V   L    + E  +L      W +   F                VVPSYG W+KVR +PLH W+L +F  IG+  GGF++ A     L + +E ++
Subjt:  PWNV---LSTAGETEVRSL-----NWELWRSF----------------VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVAL

Query:  KVKGNYCGFIPAEITLVDGLQ-SFQAQVVSFENADFLAGKVIGIHGGFSPEAARAF
        +VK NY GFI   I L+D  + S+  QV+      +   +   IHG F+ EAAR F
Subjt:  KVKGNYCGFIPAEITLVDGLQ-SFQAQVVSFENADFLAGKVIGIHGGFSPEAARAF

TYK01560.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.5e-2054.65Show/hide
Query:  RSFVVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGLQSFQAQVVSFE
        R   VPSYG W+K+RN P HLW+   FK +G+ L GF++Y   NS LI+C+EVA+KVKGNYCGF+P E  L+D   SF  QV S +
Subjt:  RSFVVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGLQSFQAQVVSFE

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-1639.26Show/hide
Query:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS
        N  ST G  +V+  +W+    SF  V+PSYG W++ R IPLHLW+  TF+ IG+A GGFLD A     +   ++  +KV+ NY GF+PA I + D   ++
Subjt:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS

Query:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ
        F    V    A +L  + + +HG F  +AA  F Q
Subjt:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]6.4e-4664.79Show/hide
Query:  RSFVVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGLQSFQAQVVSFENADFLAGKVIGIHG
        R+F+ PSYG+WVK+RNIPLHLWSLATFKAIGNALGGF+DY   NSC I C +VA+KVK NYCGFIPAEI+ +DG   FQA+VVSFE++ +LA K +GIHG
Subjt:  RSFVVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGLQSFQAQVVSFENADFLAGKVIGIHG

Query:  GFSPEAARAFYQAENRDSDHSTADVWRMQDGQHYPVVKIWYP
        GFS EAAR+F+Q     S +S  D WR+++G +YP V I YP
Subjt:  GFSPEAARAFYQAENRDSDHSTADVWRMQDGQHYPVVKIWYP

TrEMBL top hitse value%identityAlignment
A0A5A7US62 LINE-1 retrotransposable element ORF2 protein8.8e-1739.26Show/hide
Query:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS
        N  ST G  +V+  +W+    SF  V+PSYG W++ R IPLHLW+  TF+ IG+A GGFLD A     +   ++  +KV+ NY GF+PA I + D   ++
Subjt:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS

Query:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ
        F    V    A +L  + + +HG F  +AA  F Q
Subjt:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein8.8e-1739.26Show/hide
Query:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS
        N  ST G  +V+  +W+    SF  V+PSYG W++ R IPLHLW+  TF+ IG+A GGFLD A     +   ++  +KV+ NY GF+PA I + D   ++
Subjt:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS

Query:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ
        F    V    A +L  + + +HG F  +AA  F Q
Subjt:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ

A0A5D3BR42 LINE-1 retrotransposable element ORF2 protein1.7e-2054.65Show/hide
Query:  RSFVVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGLQSFQAQVVSFE
        R   VPSYG W+K+RN P HLW+   FK +G+ L GF++Y   NS LI+C+EVA+KVKGNYCGF+P E  L+D   SF  QV S +
Subjt:  RSFVVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGLQSFQAQVVSFE

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein8.8e-1739.26Show/hide
Query:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS
        N  ST G  +V+  +W+    SF  V+PSYG W++ R IPLHLW+  TF+ IG+A GGFLD A     +   ++  +KV+ NY GF+PA I + D   ++
Subjt:  NVLSTAGETEVRSLNWEL-WRSF--VVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGL-QS

Query:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ
        F    V    A +L  + + +HG F  +AA  F Q
Subjt:  FQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQ

A0A6J1D6X4 uncharacterized protein LOC1110181863.1e-4664.79Show/hide
Query:  RSFVVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGLQSFQAQVVSFENADFLAGKVIGIHG
        R+F+ PSYG+WVK+RNIPLHLWSLATFKAIGNALGGF+DY   NSC I C +VA+KVK NYCGFIPAEI+ +DG   FQA+VVSFE++ +LA K +GIHG
Subjt:  RSFVVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEITLVDGLQSFQAQVVSFENADFLAGKVIGIHG

Query:  GFSPEAARAFYQAENRDSDHSTADVWRMQDGQHYPVVKIWYP
        GFS EAAR+F+Q     S +S  D WR+++G +YP V I YP
Subjt:  GFSPEAARAFYQAENRDSDHSTADVWRMQDGQHYPVVKIWYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGCACTTGTAAGATGGGATTGCGTGGACGCATGGGCCGTGGTGGTCACACGCATGAGCTGCATTGTTTGCACACACGAGCTAAACAAACCGCATGTTAGGACTGT
CCACGAGCTGCACGACCATGAGAATCGCGTTCACGTGGCCCAAAGAATGGTTGCGCGGCCACAGGGGCAGTGCTCGACCGAGGTAGTTCTCGAAGTTGAGATAGTGCTCG
AGACCGAGGGCAATCGAATCGAGTGGTCTGGGTTTGACCTAATGGGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTCTACCGT
GGGCACGATAACTGGTACACCAGAGGTGGTCGCAGTGGGCACAAGGGGACACGGCTGCATGTTCCACGCTCGCTTGGCACGGAGGCTGTGCTCCCTTGCATTGAGAATAG
GCGGCTTGGCCGCGTGGGTTGCACTACCTTTGCAAAGAGAATGGTTGTGCGACTGTGGAGGTCGCGCTCCCTTGGAATGGAGAAGAGCTTTTCGACTGCAATGGTGGCGT
ATGTGCGCAACGCTTGGGCTGAGCTGATGGGTCGTAGTGATGGCATGTGTGCCACACTGGATGCATTGAATGCGCGGGTCATTTGGGCCTTGCAAAGGTGCGACCCTACA
AGTGGGAGTGCAGCCATCATAGTCGTGCTTGTAGTCTGGGCTGCACAAGGAGTGCGAAGTTCTTCAGGAAGACGAATTGCAACGGGGTTTTATCTGGATACAAAAAGCTT
CAAACAAGAGAGGAAGCTCTTGGAGTTGACGAAAGTTCAGAGTTCTGGAGGGAAAAAGAATATTGTAGTCCCGTCAGATGAAGATTACAAAGGTTGGGCAACTTTCCGAA
AGCTGCTTATCGATTTTTTGAATGAGGAAAAATCCATCAAGAATGGGACGGTTGGGAGTCCCTCCCCGTCGGAGATTCGCCCAAGGGCTTTGAAGCAGAAGTCTTTTGCT
GATGTTCTAAGAGCTAAAGAGCAGAAAGCAGATAAACAGACCATGACCTTTAGTCCACCGTGGAACGTTTTAAGTACTGCGGGTGAAACAGAGGTTCGCAGCCTAAACTG
GGAATTGTGGCGCTCTTTCGTGGTGCCTTCATACGGGGATTGGGTAAAAGTGAGAAACATTCCCCTACATTTATGGAGTTTGGCAACCTTTAAGGCAATAGGAAATGCTT
TGGGAGGTTTTCTGGACTACGCCAGCATTAATTCTTGCCTTATTAATTGCTTGGAGGTGGCCTTAAAGGTCAAAGGTAATTATTGCGGGTTCATTCCAGCAGAAATAACT
CTTGTTGATGGTTTACAATCGTTTCAGGCGCAGGTGGTATCTTTCGAAAATGCAGATTTCTTGGCCGGAAAAGTCATAGGAATTCATGGCGGATTCTCGCCGGAGGCAGC
AAGAGCGTTTTACCAAGCTGAAAATAGGGACTCAGACCATAGTACAGCGGATGTTTGGAGAATGCAGGATGGACAGCATTACCCAGTGGTGAAAATTTGGTACCCTCCCT
GTGTGACCGGTCAAAGAGGCAGCCCCTCTGATGCCCCTAGTTTGACAGATTTGACAGGAGCCTGCCCCCACCTTTTGTCAACTTTTTGCCTCAAATCGAAGCAAATACAG
GCTCACAGACCAAAGCAGAGGACAAAGGAAGGCCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGCACTTGTAAGATGGGATTGCGTGGACGCATGGGCCGTGGTGGTCACACGCATGAGCTGCATTGTTTGCACACACGAGCTAAACAAACCGCATGTTAGGACTGT
CCACGAGCTGCACGACCATGAGAATCGCGTTCACGTGGCCCAAAGAATGGTTGCGCGGCCACAGGGGCAGTGCTCGACCGAGGTAGTTCTCGAAGTTGAGATAGTGCTCG
AGACCGAGGGCAATCGAATCGAGTGGTCTGGGTTTGACCTAATGGGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTCTACCGT
GGGCACGATAACTGGTACACCAGAGGTGGTCGCAGTGGGCACAAGGGGACACGGCTGCATGTTCCACGCTCGCTTGGCACGGAGGCTGTGCTCCCTTGCATTGAGAATAG
GCGGCTTGGCCGCGTGGGTTGCACTACCTTTGCAAAGAGAATGGTTGTGCGACTGTGGAGGTCGCGCTCCCTTGGAATGGAGAAGAGCTTTTCGACTGCAATGGTGGCGT
ATGTGCGCAACGCTTGGGCTGAGCTGATGGGTCGTAGTGATGGCATGTGTGCCACACTGGATGCATTGAATGCGCGGGTCATTTGGGCCTTGCAAAGGTGCGACCCTACA
AGTGGGAGTGCAGCCATCATAGTCGTGCTTGTAGTCTGGGCTGCACAAGGAGTGCGAAGTTCTTCAGGAAGACGAATTGCAACGGGGTTTTATCTGGATACAAAAAGCTT
CAAACAAGAGAGGAAGCTCTTGGAGTTGACGAAAGTTCAGAGTTCTGGAGGGAAAAAGAATATTGTAGTCCCGTCAGATGAAGATTACAAAGGTTGGGCAACTTTCCGAA
AGCTGCTTATCGATTTTTTGAATGAGGAAAAATCCATCAAGAATGGGACGGTTGGGAGTCCCTCCCCGTCGGAGATTCGCCCAAGGGCTTTGAAGCAGAAGTCTTTTGCT
GATGTTCTAAGAGCTAAAGAGCAGAAAGCAGATAAACAGACCATGACCTTTAGTCCACCGTGGAACGTTTTAAGTACTGCGGGTGAAACAGAGGTTCGCAGCCTAAACTG
GGAATTGTGGCGCTCTTTCGTGGTGCCTTCATACGGGGATTGGGTAAAAGTGAGAAACATTCCCCTACATTTATGGAGTTTGGCAACCTTTAAGGCAATAGGAAATGCTT
TGGGAGGTTTTCTGGACTACGCCAGCATTAATTCTTGCCTTATTAATTGCTTGGAGGTGGCCTTAAAGGTCAAAGGTAATTATTGCGGGTTCATTCCAGCAGAAATAACT
CTTGTTGATGGTTTACAATCGTTTCAGGCGCAGGTGGTATCTTTCGAAAATGCAGATTTCTTGGCCGGAAAAGTCATAGGAATTCATGGCGGATTCTCGCCGGAGGCAGC
AAGAGCGTTTTACCAAGCTGAAAATAGGGACTCAGACCATAGTACAGCGGATGTTTGGAGAATGCAGGATGGACAGCATTACCCAGTGGTGAAAATTTGGTACCCTCCCT
GTGTGACCGGTCAAAGAGGCAGCCCCTCTGATGCCCCTAGTTTGACAGATTTGACAGGAGCCTGCCCCCACCTTTTGTCAACTTTTTGCCTCAAATCGAAGCAAATACAG
GCTCACAGACCAAAGCAGAGGACAAAGGAAGGCCCATGA
Protein sequenceShow/hide protein sequence
MTALVRWDCVDAWAVVVTRMSCIVCTHELNKPHVRTVHELHDHENRVHVAQRMVARPQGQCSTEVVLEVEIVLETEGNRIEWSGFDLMGAYYLDAFSSYPLRTWLPSVYR
GHDNWYTRGGRSGHKGTRLHVPRSLGTEAVLPCIENRRLGRVGCTTFAKRMVVRLWRSRSLGMEKSFSTAMVAYVRNAWAELMGRSDGMCATLDALNARVIWALQRCDPT
SGSAAIIVVLVVWAAQGVRSSSGRRIATGFYLDTKSFKQERKLLELTKVQSSGGKKNIVVPSDEDYKGWATFRKLLIDFLNEEKSIKNGTVGSPSPSEIRPRALKQKSFA
DVLRAKEQKADKQTMTFSPPWNVLSTAGETEVRSLNWELWRSFVVPSYGDWVKVRNIPLHLWSLATFKAIGNALGGFLDYASINSCLINCLEVALKVKGNYCGFIPAEIT
LVDGLQSFQAQVVSFENADFLAGKVIGIHGGFSPEAARAFYQAENRDSDHSTADVWRMQDGQHYPVVKIWYPPCVTGQRGSPSDAPSLTDLTGACPHLLSTFCLKSKQIQ
AHRPKQRTKEGP