CuGenDBv2

Gene ID	Moc02g01760
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase domain-containing protein
Genome location	chr2:1298741..1314702
RNA-Seq Expression	Moc02g01760
Synteny	Moc02g01760
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

BBH05705.1 TatD related DNase [Prunus dulcis]

7.2e-45

42.4

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Query:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN
        FW PV DKV K+++K +   LSKGGRLTL Q+V+++IP YY S+ K P GV   +E++  NFLW G  ++G   HLV W + +   + GGLGIG  +++N
Subjt:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN

Query:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK
         +L  KWLWRF  ETN+LW R+I S YG  ++GW T      +   PW +I+K          F   NGE+I FW D W+ +  L+D FP + ++S +K 
Subjt:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK

Query:  ASIADCWREEEQ--DWD
         SIA      E   +WD
Subjt:  ASIADCWREEEQ--DWD

BBN69274.1 TatD related DNase [Prunus dulcis]

6.3e-49

42.92

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Query:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN
        FW PV+DKV K++++W+   LSKGGRLTL Q+V+++IP YY S+ K P+GV   +E++ RNFLW G  ++G   HLV W + +   + GGLGIG  +++N
Subjt:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN

Query:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK
         +L  KWLWRF  ETN+LW R+I S YG  ++GW T      +   PW +I+K    F +   F   NGE+I FW D W+ +  L+D FP ++++S +K 
Subjt:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK

Query:  ASIADCW----REEEQDWD
          IA  W     E   +WD
Subjt:  ASIADCW----REEEQDWD

TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]

3.5e-47

41.67

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Query:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN
        FW+PVV+K+ K+++ W+   LS+GGRLTL QSV+ ++P+YY S+ K P GV+  +EK+ + FLW G  ++G  +HLV W       + GGLG+G  + +N
Subjt:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN

Query:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK
         +LL KWLWRF +E ++LW +VI S YG   +GW+  PP   +   PW DI+  S  F     F+  NGER+ FW D W++   L++ FP +F +S    
Subjt:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK

Query:  ASIA
         +I+
Subjt:  ASIA

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]

6.3e-49

43.78

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Query:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN
        FW PV DKV K+++KW+   LSKGGRLTL Q+V+++IP YY S+ K P GV   +E++ RNFLW G  ++G   HLV W + +   + GGLGIG  +++N
Subjt:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN

Query:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK
         +L  KWLWRF  ETN+LW R+I S YG  ++GW T      +   PW +I+K    F +   F   NGE+I FW D W+ +  L+D FP + ++S +K 
Subjt:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK

Query:  ASIADCWREEEQ--DWD
         SIA      E   +WD
Subjt:  ASIADCWREEEQ--DWD

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]

7.9e-52

48.83

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Query:  VDKVRKKIEK--WRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKNNSL
        VDK+  ++E+  +R L L  GG   +       I  +   + KAPV + +++ KI R+  W+G T  G   +LV W  +SLP++ GGLGIG    KNN+L
Subjt:  VDKVRKKIEK--WRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKNNSL

Query:  LLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKKASI
        L+KWLW F++E NALWRRVIASIYG   +GW T  PKGKA+GRPWFDIAKN + F   + FKA  G+R+SFW DKW  +  L D FP +F +S+K+ A +
Subjt:  LLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKKASI

Query:  ADCWREEEQDWDL
         DCW EE Q WDL
Subjt:  ADCWREEEQDWDL

TrEMBL top hits

e value

%identity

Alignment

A0A5E4FU33 zf-RVT domain-containing protein (Fragment)

3.0e-49

43.78

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Query:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN
        FW PV DKV K+++KW+   LSKGGRLTL Q+V+++IP YY S+ K P GV   +E++ RNFLW G  ++G   HLV W + +   + GGLGIG  +++N
Subjt:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN

Query:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK
         +L  KWLWRF  ETN+LW R+I S YG  ++GW T      +   PW +I+K    F +   F   NGE+I FW D W+ +  L+D FP + ++S +K 
Subjt:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK

Query:  ASIADCWREEEQ--DWD
         SIA      E   +WD
Subjt:  ASIADCWREEEQ--DWD

A0A5H2XQW2 TatD related DNase

3.0e-49

42.92

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Query:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN
        FW PV+DKV K++++W+   LSKGGRLTL Q+V+++IP YY S+ K P+GV   +E++ RNFLW G  ++G   HLV W + +   + GGLGIG  +++N
Subjt:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN

Query:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK
         +L  KWLWRF  ETN+LW R+I S YG  ++GW T      +   PW +I+K    F +   F   NGE+I FW D W+ +  L+D FP ++++S +K 
Subjt:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK

Query:  ASIADCW----REEEQDWD
          IA  W     E   +WD
Subjt:  ASIADCW----REEEQDWD

A0A6J1E196 uncharacterized protein LOC111025019

3.8e-52

48.83

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Query:  VDKVRKKIEK--WRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKNNSL
        VDK+  ++E+  +R L L  GG   +       I  +   + KAPV + +++ KI R+  W+G T  G   +LV W  +SLP++ GGLGIG    KNN+L
Subjt:  VDKVRKKIEK--WRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKNNSL

Query:  LLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKKASI
        L+KWLW F++E NALWRRVIASIYG   +GW T  PKGKA+GRPWFDIAKN + F   + FKA  G+R+SFW DKW  +  L D FP +F +S+K+ A +
Subjt:  LLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKKASI

Query:  ADCWREEEQDWDL
         DCW EE Q WDL
Subjt:  ADCWREEEQDWDL

M5WZA0 Reverse transcriptase domain-containing protein (Fragment)

1.8e-49

45.1

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Query:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN
        FW PVVDKV K+++KW+   LSKGGRLTL Q+V+++IP YY S+ K P+GV   +E++ RNFLW G  ++G   HLV W + +   + GGLGIG  ++++
Subjt:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN

Query:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK
         +L  KWLWRF  ETN+LW R+I S YG  ++GW T      +   PW +I+K    F +   F   NGE+I FW D W+ +  L+D FP + ++S +K 
Subjt:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK

Query:  ASIA
         SIA
Subjt:  ASIA

M5XV38 zf-RVT domain-containing protein

4.0e-49

44.61

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Query:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN
        FW PV++KV K+++KW+   LSKGGRLTL Q+V+++IP YY S+ K P+GV   +E++ RNFLW G  ++G   HLV W + +   + GGLGIG  +++N
Subjt:  FWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN

Query:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK
         +L  KWLWRF  ETN+LW R+I S YG  ++GW T      +   PW +I+K    F +   F   NGE+I FW D W+ +  L+D FP + ++S +K 
Subjt:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNISMKKK

Query:  ASIA
         SIA
Subjt:  ASIA

SwissProt top hits

e value

%identity

Alignment

P08548 LINE-1 reverse transcriptase homolog

3.1e-06

26.52

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Query:  KDLF---WEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSI--LKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLG
        KDL+   +E +  ++ + + KW+N+  S  GR+ + +  I    +Y F+   +KAP+   +D+EKI  +F+WN    +   + L N  K       GG+ 
Subjt:  KDLF---WEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSI--LKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLG

Query:  IGGPQQKNNSLLLK--WLWRFSQETNALWRRV
        +   +    S+++K  W W  ++E + +W R+
Subjt:  IGGPQQKNNSLLLK--WLWRFSQETNALWRRV

P0C2F6 Putative ribonuclease H protein At1g65750

2.1e-23

32.99

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Query:  ITKDLFWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGG
        I KD F E ++++V  ++  WR  TLS  GRLTL ++V++++P++  S +  P  ++  +++++R FLW G+T +    HLV W K   P + GGLG+  
Subjt:  ITKDLFWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPIQYGGLGIGG

Query:  PQQKNNSLLLKWLWRFSQETNALWRRVIASIY--GESAHG-WSTIPPKGKAQGRPWFDIAKN-STFFHRFLNFKAKNGERISFWNDKWIDDSTL
         +  N +L+ K  WR  QE N+LW  V+   Y  GE     W  + PKG +    W  IA          + +   +G++I FW D+W+    L
Subjt:  PQQKNNSLLLKWLWRFSQETNALWRRVIASIY--GESAHG-WSTIPPKGKAQGRPWFDIAKN-STFFHRFLNFKAKNGERISFWNDKWIDDSTL

Arabidopsis top hits

e value

%identity

Alignment

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

2.0e-13

29.44

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Query:  PVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNG---NTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN
        P+V+K+R +I KW    LS  GRL L  SVI ++  ++ S  + P   +++I+ I  +FLW+G   NT+K      V W     P   GGLGI   ++ N
Subjt:  PVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNG---NTQKGNYSHLVNWGKTSLPIQYGGLGIGGPQQKN

Query:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHG-WSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKW
                        + W     SI G +  G W             W  I K+      F+     NG   SFW D W
Subjt:  NSLLLKWLWRFSQETNALWRRVIASIYGESAHG-WSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKW

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTTCAAAGTGGAAGAGTTTCCTTTCTCCTATTTGGGCATTCCGCTGGGGGGCAATCACAAAAGACTTATTTTGGGAGCCTGTGGTTGACAAGGTGAGAAAGAAGAT
AGAGAAATGGAGGAATCTAACCCTATCCAAGGGTGGGCGTCTTACTTTGGCTCAATCGGTGATCACTACTATTCCACTTTACTATTTTTCCATTCTTAAAGCTCCGGTGG
GGGTTGTGAGGGATATAGAAAAGATTACAAGAAATTTCCTATGGAATGGTAATACTCAGAAGGGCAATTACAGCCACCTGGTTAATTGGGGGAAAACGTCACTCCCTATA
CAGTACGGGGGTCTTGGAATTGGAGGACCTCAACAAAAAAACAATAGTCTTCTTCTTAAGTGGTTGTGGAGGTTTTCACAAGAGACAAATGCTCTTTGGAGGAGGGTGAT
AGCCAGCATCTACGGTGAGTCCGCTCACGGGTGGTCTACTATTCCCCCAAAAGGGAAAGCTCAAGGGAGACCGTGGTTTGATATTGCGAAGAATAGCACGTTCTTTCACA
GGTTTTTGAATTTCAAAGCTAAAAACGGGGAAAGAATTAGTTTTTGGAATGATAAATGGATTGATGACAGCACCCTTCGAGACTCTTTTCCGCTCATTTTTAATATATCC
ATGAAAAAGAAGGCCTCAATTGCTGATTGTTGGAGGGAGGAGGAGCAAGATTGGGACTTAGGTCCTTACTTGGAAAAGTCAACACCCTGGATCGTATTCAGAGGCGTTCT
TCTTCCTGTATCAGGCTGCAATGATGTGTTCATTGCAAGCAAGGTTCAGAGGATCTCGATCATATCTTATGGCATTGCCAATTCTCCCAGGACATCTGGGGCTGATTCTT
TGAGATTTTCGAGGTGTCTTAGGTACAGCCTCCATTTGGCTTCCTCGCTGCCGTCATCGTTAGATCGCTTGGAGAATTCGATCGGCACTGAGTCCAGAACCGTGTGTCCA
GCCAATGCGCACTGA

mRNA sequence

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Protein sequence

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MGSKWKSFLSPIWAFRWGAITKDLFWEPVVDKVRKKIEKWRNLTLSKGGRLTLAQSVITTIPLYYFSILKAPVGVVRDIEKITRNFLWNGNTQKGNYSHLVNWGKTSLPI
QYGGLGIGGPQQKNNSLLLKWLWRFSQETNALWRRVIASIYGESAHGWSTIPPKGKAQGRPWFDIAKNSTFFHRFLNFKAKNGERISFWNDKWIDDSTLRDSFPLIFNIS
MKKKASIADCWREEEQDWDLGPYLEKSTPWIVFRGVLLPVSGCNDVFIASKVQRISIISYGIANSPRTSGADSLRFSRCLRYSLHLASSLPSSLDRLENSIGTESRTVCP
ANAH

Moc02g01760 (gene) of Bitter gourd (OHB3-1) v2 genome