; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g02280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g02280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr2:1731608..1735581
RNA-Seq ExpressionMoc02g02280
SyntenyMoc02g02280
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR009688 - Protein FAM210A/B-like domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035921.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-11081.89Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

XP_022957732.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]7.9e-11081.89Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

XP_022995114.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]1.0e-10981.89Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI  L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

XP_023534188.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]7.9e-11081.89Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

XP_038901771.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]8.5e-11283.54Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIRQVWDFNL+YEF+LI  L HRFPF+SMDTEFPGVV+R  PA    R RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT N FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSI+LLKRQGIDF+RN   GV S+RFA LLMSSGLLCNDSV+WVTFHSAYDFGYLVKILTR  LPARLHDFLKILR  FGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FCD LYGGLDRVAKTL +DRAVGK HQAGSDSLLTW AFQKMR
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

TrEMBL top hitse value%identityAlignment
A0A5C7IWS3 Poly(A)-specific ribonuclease4.4e-10675.81Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR-----RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEF
        I+IR+VWDFNLE EF LI Q+   +PF+SMDTEFPG++ R  P   P++     RRPSDHY+LLKSNVD LNLIQVGLTLSD+ GNLP LGT N FIW+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR-----RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEF

Query:  NFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDV
        NFRDFD+A DAHAPDSIDLL+RQGIDF+RN ++GVDS RFA L+MSSGL+CNDSVSWVTFHSAYDFGYLVKILTR++LP+ L +FL I R+FFGNKVYDV
Subjt:  NFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDV

Query:  KHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        KHMMRFC SL+GGLDRVA+TL ++RAVGKCHQAGSDSLLTWHAFQKMR
Subjt:  KHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

A0A6J1GZY2 Poly(A)-specific ribonuclease3.8e-11081.89Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

A0A6J1K4S7 Poly(A)-specific ribonuclease5.0e-11081.89Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI  L  R+PF+SMDTEFPGVV+R  PA  PS  RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

A0A6P3Z4L2 Poly(A)-specific ribonuclease8.0e-10877.14Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR--RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFR
        I IR+VW  NLE EF LI  L   FPF+SMDTEFPG+V RP P  DP+ R  RPSDHY LLKSNVD LNLIQVGLTLSD+ GNLP LG+ N FIWEFNF 
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR--RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFR

Query:  DFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHM
        DFD++RDAHAPDSIDLL+RQGIDF RN  +G+DS RFA L+MSSGL+CND+VSWVTFHSAYDFGYLVKILTRR+LP R+ +FL++LR+FFGN+VYD+KHM
Subjt:  DFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHM

Query:  MRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        MRFC SLYGGLDRVA+TLE+DRAVGKCHQAGSDSLLTWHAFQKMR
Subjt:  MRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

A0A7N2KLU9 Poly(A)-specific ribonuclease3.4e-10676.31Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR------RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWE
        I IR+VW  NLE EF LI  +  R+P++SMDTEFPG+V R  P+ DPS+       +PSDHYR+LKSNVDVLNLIQVGLTLSDA GNLP LG+ N FIWE
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR------RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWE

Query:  FNFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYD
        FNF+DFD+ARD HAPDSI LL RQGIDF++N ++GVDS+RFA L+MSSGL+CNDSVSWVTFHSAYDFGYLVKILTRR+LP+ L +FLKILR+FFGN+VYD
Subjt:  FNFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYD

Query:  VKHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        VKHMMRFC+SLYGGLDRVA+TLE+DRAVGKCHQAGSDSLLTWHAFQKMR
Subjt:  VKHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 113.2e-9368.83Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWEFNF
        I IR VW +NLE EF LI  +   +PF+SMDTEFPGV+ +     D  RR  P+  Y LLKSNVD L+LIQVGLTLSDA GNLP LG      +IWEFNF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWEFNF

Query:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH
        RDFD+ RD HAPDSI+LL+R GIDF+RN ++GV+S RFA L+MSSGL+CN+SVSWVTFHSAYDFGYLVKILTRR LP  L +FL +LR FFG++VYDVKH
Subjt:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH

Query:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        +MRFC+  LYGGLDRVA++LE++RAVGKCHQAGSDSLLTW AFQ+MR
Subjt:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

Q9LEU4 Probable CCR4-associated factor 1 homolog 101.1e-7253.5Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I IR+VWD+NL  EF+LI ++  +F +++MDTEFPGVVL+P       +     +YR LK NVD+L LIQVGLT SD +GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        ++  D +A +SI+LL++ GIDF++N + G+D  RF  L+MSSG++ ND++SWVTFH  YDFGYLVK+LT + LP +  DF K+L ++F   VYD+KH+M 
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FC+ L+GGL+R+A+ + ++R VG CHQAGSDSLLT  +F+K++
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

Q9LXM2 Probable CCR4-associated factor 1 homolog 97.5e-9566.94Show/hide
Query:  IQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWEFN
        + +  R+VW  NLE EF LI+++   +PF+SMDTEFPGV+ +    +D     P D Y LLK+NVD L+LIQVGLTLSD +GNLP LG      FIWEFN
Subjt:  IQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWEFN

Query:  FRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVK
        FRDFD+ARDAHAPDSI+LL+RQGIDF+RN +DGV+S RFA L+MSSGL+CN+ VSWVTFHSAYDFGYL+KILTRR LP  L +F +++R+ FG +VYDVK
Subjt:  FRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVK

Query:  HMMRFCD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        HMM+FC+  L+GGLDRVA+TLE++RAVGKCHQAGSDSLLTWHAFQ+MR
Subjt:  HMMRFCD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

Q9SAI2 Probable CCR4-associated factor 1 homolog 62.8e-7355.14Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K++
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

Q9SKZ2 Probable CCR4-associated factor 1 homolog 76.2e-7354.92Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAF-IWEFNFRD
        IQIR+VW+ NLE E +LI ++   FPFV+MDTEFPG+V RP       +     HY  LK+NV++L +IQ+GLT SD  GNLPT GT N + IW+FNFR+
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAF-IWEFNFRD

Query:  FDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMM
        FDL  D +A DSI+LL++ GIDF +N + G+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP     F +++ ++F  +VYD+KH+M
Subjt:  FDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMM

Query:  RFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        +FC+SL+GGL+++A+ L+++R VG CHQAGSDSLLT   F+K++
Subjt:  RFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-7455.14Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K++
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-7455.14Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K++
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-7455.14Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K++
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.3e-9666.94Show/hide
Query:  IQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWEFN
        + +  R+VW  NLE EF LI+++   +PF+SMDTEFPGV+ +    +D     P D Y LLK+NVD L+LIQVGLTLSD +GNLP LG      FIWEFN
Subjt:  IQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWEFN

Query:  FRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVK
        FRDFD+ARDAHAPDSI+LL+RQGIDF+RN +DGV+S RFA L+MSSGL+CN+ VSWVTFHSAYDFGYL+KILTRR LP  L +F +++R+ FG +VYDVK
Subjt:  FRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVK

Query:  HMMRFCD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        HMM+FC+  L+GGLDRVA+TLE++RAVGKCHQAGSDSLLTWHAFQ+MR
Subjt:  HMMRFCD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.2e-9468.83Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWEFNF
        I IR VW +NLE EF LI  +   +PF+SMDTEFPGV+ +     D  RR  P+  Y LLKSNVD L+LIQVGLTLSDA GNLP LG      +IWEFNF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWEFNF

Query:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH
        RDFD+ RD HAPDSI+LL+R GIDF+RN ++GV+S RFA L+MSSGL+CN+SVSWVTFHSAYDFGYLVKILTRR LP  L +FL +LR FFG++VYDVKH
Subjt:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH

Query:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR
        +MRFC+  LYGGLDRVA++LE++RAVGKCHQAGSDSLLTW AFQ+MR
Subjt:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATCCAAATCCAGATCCGTCAGGTTTGGGATTTCAATCTGGAATACGAATTCAGCCTCATCGCTCAACTCAACCATCGATTCCCTTTCGTTTCCATGGATACGGA
GTTTCCCGGCGTCGTCCTCCGCCCTGGCCCTGCCGCCGATCCATCTCGCCGACGCCCCTCCGACCACTACCGTCTCCTCAAGTCAAACGTCGACGTTTTGAACCTTATCC
AGGTCGGCCTCACCCTCTCCGACGCCCACGGTAACCTCCCCACTCTCGGTACCCCCAACGCCTTCATTTGGGAGTTCAACTTCAGGGATTTCGACTTGGCCCGTGACGCC
CACGCTCCCGATTCCATCGACCTCTTGAAACGCCAGGGGATCGACTTCCAACGGAACGCCAAGGACGGCGTCGACTCGGCCCGGTTCGCCCACTTGCTCATGTCATCCGG
TCTTCTCTGTAACGACTCCGTCAGCTGGGTCACGTTTCACAGCGCCTACGATTTCGGGTACCTGGTCAAGATCCTCACCCGCCGGAACTTGCCGGCTCGCCTCCACGACT
TCTTGAAAATTCTCAGGCTCTTTTTCGGAAACAAAGTTTACGACGTCAAGCACATGATGCGGTTCTGTGATTCCCTCTACGGCGGCTTGGACCGGGTCGCCAAGACCCTT
GAGCTGGACCGCGCGGTTGGGAAGTGCCACCAGGCCGGTTCTGATAGCCTGCTGACCTGGCATGCCTTTCAGAAAATGAGATTTCACTTGAAATCTCCCAATCGATCTCC
AAAATTCAATTCGGAACGATTCAGATTTAGGGTGAAAGCCCTTAAAGAGAAAACGGGCGAAATCGAACGCCCATCTCCAGATGAAGTTACCAAGAAGTACGGACTCGAAG
CTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGAGAGGGCGATGTTGGGAAAGGCAAATCAAAGGGTGAGCAGGCAAAAGAGCTGCTTGCAAAATATGGAGGTGCA
TATTTAGCCACCTCCATAACTCTCTCCCTCATCTCCTTCTCTCTGTGCTATGCACTCATCAGTGCCGGTATCGATGTTCAAGCTCTTCTGCAGAAGGTAGGAATTTCGGC
TAATGAGACTGGAGAGAAAGTTGGGACGTTTGCTTTGGCATACGCAGCGCATAAAGCAGCTTCTCCAATAAGGTTTCCTCCAACAGTAGCCCTCACTCCAATTGTTGCAA
GTTGGATAGGGAAAAAGGTTTATAAATGGAGCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGATCCAAATCCAGATCCGTCAGGTTTGGGATTTCAATCTGGAATACGAATTCAGCCTCATCGCTCAACTCAACCATCGATTCCCTTTCGTTTCCATGGATACGGA
GTTTCCCGGCGTCGTCCTCCGCCCTGGCCCTGCCGCCGATCCATCTCGCCGACGCCCCTCCGACCACTACCGTCTCCTCAAGTCAAACGTCGACGTTTTGAACCTTATCC
AGGTCGGCCTCACCCTCTCCGACGCCCACGGTAACCTCCCCACTCTCGGTACCCCCAACGCCTTCATTTGGGAGTTCAACTTCAGGGATTTCGACTTGGCCCGTGACGCC
CACGCTCCCGATTCCATCGACCTCTTGAAACGCCAGGGGATCGACTTCCAACGGAACGCCAAGGACGGCGTCGACTCGGCCCGGTTCGCCCACTTGCTCATGTCATCCGG
TCTTCTCTGTAACGACTCCGTCAGCTGGGTCACGTTTCACAGCGCCTACGATTTCGGGTACCTGGTCAAGATCCTCACCCGCCGGAACTTGCCGGCTCGCCTCCACGACT
TCTTGAAAATTCTCAGGCTCTTTTTCGGAAACAAAGTTTACGACGTCAAGCACATGATGCGGTTCTGTGATTCCCTCTACGGCGGCTTGGACCGGGTCGCCAAGACCCTT
GAGCTGGACCGCGCGGTTGGGAAGTGCCACCAGGCCGGTTCTGATAGCCTGCTGACCTGGCATGCCTTTCAGAAAATGAGATTTCACTTGAAATCTCCCAATCGATCTCC
AAAATTCAATTCGGAACGATTCAGATTTAGGGTGAAAGCCCTTAAAGAGAAAACGGGCGAAATCGAACGCCCATCTCCAGATGAAGTTACCAAGAAGTACGGACTCGAAG
CTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGAGAGGGCGATGTTGGGAAAGGCAAATCAAAGGGTGAGCAGGCAAAAGAGCTGCTTGCAAAATATGGAGGTGCA
TATTTAGCCACCTCCATAACTCTCTCCCTCATCTCCTTCTCTCTGTGCTATGCACTCATCAGTGCCGGTATCGATGTTCAAGCTCTTCTGCAGAAGGTAGGAATTTCGGC
TAATGAGACTGGAGAGAAAGTTGGGACGTTTGCTTTGGCATACGCAGCGCATAAAGCAGCTTCTCCAATAAGGTTTCCTCCAACAGTAGCCCTCACTCCAATTGTTGCAA
GTTGGATAGGGAAAAAGGTTTATAAATGGAGCACTTGA
Protein sequenceShow/hide protein sequence
MVIQIQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDFDLARDA
HAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMRFCDSLYGGLDRVAKTL
ELDRAVGKCHQAGSDSLLTWHAFQKMRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSPDEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGA
YLATSITLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVYKWST