; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g02760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g02760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr2:2075264..2077854
RNA-Seq ExpressionMoc02g02760
SyntenyMoc02g02760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN66330.1 hypothetical protein VITISV_000598 [Vitis vinifera]3.0e-5627.54Show/hide
Query:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS
        +E +G LS +L   R   KG   +++ +E+  W+QKAK KW KEGDCNS+ FH +ANGRR+KN I  L NE G V+   + I EE++L+FK LYS  P  
Subjt:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS

Query:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG--------------------------
           ++G+DW+PI       L++PF+  E+   +F  DRDK+ GPDGF++A FQD WD +KEDL++VF E  + G                          
Subjt:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG--------------------------

Query:  -----------------------------------------------------------GEEGA------------------------------------
                                                                   GEEG                                     
Subjt:  -----------------------------------------------------------GEEGA------------------------------------

Query:  --------------------------------------------------------LDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFE
                                                                L+ F VGR + R+SHLQFADDTILF S   +  + L  LL  F 
Subjt:  --------------------------------------------------------LDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFE

Query:  AIS--------------------------------------------GHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLF
         IS                                            G NP +  FW  V+E+   R   W+KA+ S  GR+TL+   L  IP+YFL LF
Subjt:  AIS--------------------------------------------GHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLF

Query:  RIPVTVNEGLEKLMRDFLWESVEEG-SLNTYFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRESSEVSDLPDQLSRV
        +IP +V   +E+L RDFLW  V EG      FWED W GD+ L   +PR++ +   K + ++ +L       S +    R+LT  E  ++  L   L  +
Subjt:  RIPVTVNEGLEKLMRDFLWESVEEG-SLNTYFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRESSEVSDLPDQLSRV

Query:  SLFVGREDVK
        +L     D +
Subjt:  SLFVGREDVK

RVW72039.1 putative ribonuclease H protein [Vitis vinifera]4.0e-5636.34Show/hide
Query:  DILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCSRPFLKGLDWNPILVLEKENLEAP
        D+L KE+  WRQK++ KW KEGDCNS+FFH +A GRRS+  I SL++E GE L   + I EE++ FF NLYS        ++G+DW PI       L+ P
Subjt:  DILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCSRPFLKGLDWNPILVLEKENLEAP

Query:  FSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG---------------GEEGA-------LDA-------------------
        FS EEVR  VF  +++K+ GPDGF++A +Q+ WD +KEDLM+VF E  + G               G +GA       LDA                   
Subjt:  FSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG---------------GEEGA-------LDA-------------------

Query:  -----------------------------------------------------------------FEVGREKIRLSHLQFADDTILFCSGNPNAFKNLN-
                                                                         F VGR++ R+S LQFADDTI F   + +  +NL  
Subjt:  -----------------------------------------------------------------FEVGREKIRLSHLQFADDTILFCSGNPNAFKNLN-

Query:  CLLGFFEAISGHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG
         LL F +A    NPK+  FW  V+E+   R   WKKA+ S  GR+TLIQ  L  IP+YFL LF+IPV++   +EK+ RDFLW    EG
Subjt:  CLLGFFEAISGHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG

RVW87607.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.8e-5626.92Show/hide
Query:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS
        +E +G L+ +L  +R   KG   +++ +E+  WRQKAK KW KEGDCNS+F+H +ANGRR++  I  L NE G VL+  + I EE++ +F+ LY+     
Subjt:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS

Query:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRE-------------------------------
           ++GLDW+PI       LE+PF+ EE+ + +F  DRDK+ GPDGF++A FQ+ WD +KEDL++VF E                               
Subjt:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRE-------------------------------

Query:  --------------------------------------------------------------------------------------------LISVGGEE
                                                                                                    ++    E 
Subjt:  --------------------------------------------------------------------------------------------LISVGGEE

Query:  GALDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAIS--------------------------------------------GHNPKSA
          L+ F VGR + R+SHLQFADDTI F +      + L  LL  F  IS                                            G NPK+ 
Subjt:  GALDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAIS--------------------------------------------GHNPKSA

Query:  IFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG-----------------------------
         FW  V+E+   R   W+KA+ S  GR+TLIQ  L  +P+YFL LF++P TV   +E+L RDFLW  V EG                             
Subjt:  IFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG-----------------------------

Query:  ----------------------------SLNT----------YFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRESS
                                    SL T           FWED W GD+PL   +PR++ +   K +S++ VL P    L  +L   R+L+  E  
Subjt:  ----------------------------SLNT----------YFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRESS

Query:  EVSDLPDQLSRVSLFVGREDVKGDDGGSFVIPPVSRQRAFSLASVFSGYS
        ++  L   L  + L     D +        + P+S    FS+ S F   S
Subjt:  EVSDLPDQLSRVSLFVGREDVKGDDGGSFVIPPVSRQRAFSLASVFSGYS

RVX04307.1 Beta-arabinofuranosyltransferase RAY1 [Vitis vinifera]1.2e-5526.69Show/hide
Query:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS
        +E +G L+ +L  +R   KG   +++ +E+  WRQKAK KW KEGDCNS+F+H +ANGRR++  I  L NE G VL+  + I EE++ +F+ LY+     
Subjt:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS

Query:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG--------------------------
           ++GLDW+PI       L++PF+ EE+ + +F  DRDK+ GPDGF++  FQ+ WD +KEDL++VF E    G                          
Subjt:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG--------------------------

Query:  ------------GEEGA-----------------------------------------------------------------------------------
                    GEEG                                                                                    
Subjt:  ------------GEEGA-----------------------------------------------------------------------------------

Query:  ---------LDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAIS--------------------------------------------
                 ++ F VGR + R+SHLQFADDTI F +      + L  LL  F  IS                                            
Subjt:  ---------LDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAIS--------------------------------------------

Query:  GHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG----------------------
        G NPK+  FW  V+E+   R   W+K + S  GR+T IQ  L  +P+YFL LF+IP +V   +E+L RDFLW  V EG                      
Subjt:  GHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG----------------------

Query:  ------------------------------SLNT----------YFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRE
                                      SL T           FWED W GD+PL   +PR++ +   K +S++ VL P    L  +L   R+L+  E
Subjt:  ------------------------------SLNT----------YFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRE

Query:  SSEVSDLPDQLSRVSLFVGREDVKGDDGGSFVIPPVSRQRAFSLASVFSGYS
          ++  L   L  + L     D +        + P+S    FS+ S F   S
Subjt:  SSEVSDLPDQLSRVSLFVGREDVKGDDGGSFVIPPVSRQRAFSLASVFSGYS

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]4.8e-6246.59Show/hide
Query:  LMKVFRELISVGGEEGALDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAISG---HNPKSAIF-----------WASVLEKFQERPS
        ++ +   LISVG E+ AL+AFEV REK  LSHLQFAD+T+LFCSGN  AF+NLN LLGFFEAISG   +  KS++            WA++   FQ+  S
Subjt:  LMKVFRELISVGGEEGALDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAISG---HNPKSAIF-----------WASVLEKFQERPS

Query:  TWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG--------------------------------------------
        +WKKAFFSK GRLTLIQ VL+GIPNY+L LFRIPV V EGLEK+MRDFLWE VEEG                                            
Subjt:  TWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG--------------------------------------------

Query:  -----------------------------------------------------SLNTYFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLS
                                                              LN YFWEDTW+G+KPL LAFPRIYFLS+KKLLSVAEVL+ GEE  S
Subjt:  -----------------------------------------------------SLNTYFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLS

Query:  ISLGLTRSLTGRESSEVSDLPDQLSRVSLFVGREDVK
        ISLGL+RSLT  ES E++ L D L  VS   GREDV+
Subjt:  ISLGLTRSLTGRESSEVSDLPDQLSRVSLFVGREDVK

TrEMBL top hitse value%identityAlignment
A0A438GIJ8 Putative ribonuclease H protein1.9e-5636.34Show/hide
Query:  DILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCSRPFLKGLDWNPILVLEKENLEAP
        D+L KE+  WRQK++ KW KEGDCNS+FFH +A GRRS+  I SL++E GE L   + I EE++ FF NLYS        ++G+DW PI       L+ P
Subjt:  DILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCSRPFLKGLDWNPILVLEKENLEAP

Query:  FSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG---------------GEEGA-------LDA-------------------
        FS EEVR  VF  +++K+ GPDGF++A +Q+ WD +KEDLM+VF E  + G               G +GA       LDA                   
Subjt:  FSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG---------------GEEGA-------LDA-------------------

Query:  -----------------------------------------------------------------FEVGREKIRLSHLQFADDTILFCSGNPNAFKNLN-
                                                                         F VGR++ R+S LQFADDTI F   + +  +NL  
Subjt:  -----------------------------------------------------------------FEVGREKIRLSHLQFADDTILFCSGNPNAFKNLN-

Query:  CLLGFFEAISGHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG
         LL F +A    NPK+  FW  V+E+   R   WKKA+ S  GR+TLIQ  L  IP+YFL LF+IPV++   +EK+ RDFLW    EG
Subjt:  CLLGFFEAISGHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG

A0A438HT14 Transposon TX1 uncharacterized 149 kDa protein8.6e-5726.92Show/hide
Query:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS
        +E +G L+ +L  +R   KG   +++ +E+  WRQKAK KW KEGDCNS+F+H +ANGRR++  I  L NE G VL+  + I EE++ +F+ LY+     
Subjt:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS

Query:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRE-------------------------------
           ++GLDW+PI       LE+PF+ EE+ + +F  DRDK+ GPDGF++A FQ+ WD +KEDL++VF E                               
Subjt:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRE-------------------------------

Query:  --------------------------------------------------------------------------------------------LISVGGEE
                                                                                                    ++    E 
Subjt:  --------------------------------------------------------------------------------------------LISVGGEE

Query:  GALDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAIS--------------------------------------------GHNPKSA
          L+ F VGR + R+SHLQFADDTI F +      + L  LL  F  IS                                            G NPK+ 
Subjt:  GALDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAIS--------------------------------------------GHNPKSA

Query:  IFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG-----------------------------
         FW  V+E+   R   W+KA+ S  GR+TLIQ  L  +P+YFL LF++P TV   +E+L RDFLW  V EG                             
Subjt:  IFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG-----------------------------

Query:  ----------------------------SLNT----------YFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRESS
                                    SL T           FWED W GD+PL   +PR++ +   K +S++ VL P    L  +L   R+L+  E  
Subjt:  ----------------------------SLNT----------YFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRESS

Query:  EVSDLPDQLSRVSLFVGREDVKGDDGGSFVIPPVSRQRAFSLASVFSGYS
        ++  L   L  + L     D +        + P+S    FS+ S F   S
Subjt:  EVSDLPDQLSRVSLFVGREDVKGDDGGSFVIPPVSRQRAFSLASVFSGYS

A0A438J5R7 Beta-arabinofuranosyltransferase RAY15.6e-5626.69Show/hide
Query:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS
        +E +G L+ +L  +R   KG   +++ +E+  WRQKAK KW KEGDCNS+F+H +ANGRR++  I  L NE G VL+  + I EE++ +F+ LY+     
Subjt:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS

Query:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG--------------------------
           ++GLDW+PI       L++PF+ EE+ + +F  DRDK+ GPDGF++  FQ+ WD +KEDL++VF E    G                          
Subjt:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG--------------------------

Query:  ------------GEEGA-----------------------------------------------------------------------------------
                    GEEG                                                                                    
Subjt:  ------------GEEGA-----------------------------------------------------------------------------------

Query:  ---------LDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAIS--------------------------------------------
                 ++ F VGR + R+SHLQFADDTI F +      + L  LL  F  IS                                            
Subjt:  ---------LDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAIS--------------------------------------------

Query:  GHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG----------------------
        G NPK+  FW  V+E+   R   W+K + S  GR+T IQ  L  +P+YFL LF+IP +V   +E+L RDFLW  V EG                      
Subjt:  GHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG----------------------

Query:  ------------------------------SLNT----------YFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRE
                                      SL T           FWED W GD+PL   +PR++ +   K +S++ VL P    L  +L   R+L+  E
Subjt:  ------------------------------SLNT----------YFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRE

Query:  SSEVSDLPDQLSRVSLFVGREDVKGDDGGSFVIPPVSRQRAFSLASVFSGYS
          ++  L   L  + L     D +        + P+S    FS+ S F   S
Subjt:  SSEVSDLPDQLSRVSLFVGREDVKGDDGGSFVIPPVSRQRAFSLASVFSGYS

A0A6J1DFI2 uncharacterized protein LOC1110196242.3e-6246.59Show/hide
Query:  LMKVFRELISVGGEEGALDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAISG---HNPKSAIF-----------WASVLEKFQERPS
        ++ +   LISVG E+ AL+AFEV REK  LSHLQFAD+T+LFCSGN  AF+NLN LLGFFEAISG   +  KS++            WA++   FQ+  S
Subjt:  LMKVFRELISVGGEEGALDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFEAISG---HNPKSAIF-----------WASVLEKFQERPS

Query:  TWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG--------------------------------------------
        +WKKAFFSK GRLTLIQ VL+GIPNY+L LFRIPV V EGLEK+MRDFLWE VEEG                                            
Subjt:  TWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEG--------------------------------------------

Query:  -----------------------------------------------------SLNTYFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLS
                                                              LN YFWEDTW+G+KPL LAFPRIYFLS+KKLLSVAEVL+ GEE  S
Subjt:  -----------------------------------------------------SLNTYFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLS

Query:  ISLGLTRSLTGRESSEVSDLPDQLSRVSLFVGREDVK
        ISLGL+RSLT  ES E++ L D L  VS   GREDV+
Subjt:  ISLGLTRSLTGRESSEVSDLPDQLSRVSLFVGREDVK

A5C3T9 Uncharacterized protein1.5e-5627.54Show/hide
Query:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS
        +E +G LS +L   R   KG   +++ +E+  W+QKAK KW KEGDCNS+ FH +ANGRR+KN I  L NE G V+   + I EE++L+FK LYS  P  
Subjt:  MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS

Query:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG--------------------------
           ++G+DW+PI       L++PF+  E+   +F  DRDK+ GPDGF++A FQD WD +KEDL++VF E  + G                          
Subjt:  RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG--------------------------

Query:  -----------------------------------------------------------GEEGA------------------------------------
                                                                   GEEG                                     
Subjt:  -----------------------------------------------------------GEEGA------------------------------------

Query:  --------------------------------------------------------LDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFE
                                                                L+ F VGR + R+SHLQFADDTILF S   +  + L  LL  F 
Subjt:  --------------------------------------------------------LDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLGFFE

Query:  AIS--------------------------------------------GHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLF
         IS                                            G NP +  FW  V+E+   R   W+KA+ S  GR+TL+   L  IP+YFL LF
Subjt:  AIS--------------------------------------------GHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLF

Query:  RIPVTVNEGLEKLMRDFLWESVEEG-SLNTYFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRESSEVSDLPDQLSRV
        +IP +V   +E+L RDFLW  V EG      FWED W GD+ L   +PR++ +   K + ++ +L       S +    R+LT  E  ++  L   L  +
Subjt:  RIPVTVNEGLEKLMRDFLWESVEEG-SLNTYFWEDTWIGDKPLCLAFPRIYFLSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRESSEVSDLPDQLSRV

Query:  SLFVGREDVK
        +L     D +
Subjt:  SLFVGREDVK

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein7.4e-0525Show/hide
Query:  LANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYS----PAPCSRPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMA
        L   +R KN I ++ N+ G++  +  +I+  +  ++K+LY+           FL       +   E E+L  P +  E+  ++      KS GPDGF+  
Subjt:  LANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYS----PAPCSRPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMA

Query:  FFQDNWDGVKEDLMKVFRELISVG
        F+Q   + +   L+K+F+ +   G
Subjt:  FFQDNWDGVKEDLMKVFRELISVG

P08548 LINE-1 reverse transcriptase homolog4.3e-0526.72Show/hide
Query:  SLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS----RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSM
        +L   +R K++I S+ N + E+  +  +I++ +  ++K LYS    +      +L+      +   E E L  P S  E+   +    + KS GPDGF+ 
Subjt:  SLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCS----RPFLKGLDWNPILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSM

Query:  AFFQDNWDGVKEDLMKVFRELISVGGEEGAL
         F+Q      KE+L+ +   L     +EG L
Subjt:  AFFQDNWDGVKEDLMKVFRELISVGGEEGAL

P0C2F6 Putative ribonuclease H protein At1g657503.7e-0433.82Show/hide
Query:  WASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEE
        +  +LE+   R S W++   S  GRLTL + VL  +P + +    +P ++   L++L R FLW S  E
Subjt:  WASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEE

P11369 LINE-1 retrotransposable element ORF2 protein2.4e-0831.54Show/hide
Query:  LANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCSRPFL-KGLDWNPILVLEK---ENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMA
        L  G R K +I  + NE G++  + ++I+  +  F+K LYS    +   + K LD   +  L +   ++L +P S +E+  V+      KS GPDGFS  
Subjt:  LANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCSRPFL-KGLDWNPILVLEK---ENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMA

Query:  FFQDNWDGVKEDLMKVFRELISVGGEEGAL
        F+Q      KEDL+ +  +L      EG L
Subjt:  FFQDNWDGVKEDLMKVFRELISVGGEEGAL

P14381 Transposon TX1 uncharacterized 149 kDa protein8.1e-1232.58Show/hide
Query:  DCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCSRPFLKGLDWNPILVL---EKENLEAPFSLEEVRRVVFGFDRDKSL
        D  SRFF++L   + ++  I  L  E G  L + + I +    F++NL+SP P S    + L W+ + V+    KE LE P +L+E+ + +     +KS 
Subjt:  DCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCSRPFLKGLDWNPILVL---EKENLEAPFSLEEVRRVVFGFDRDKSL

Query:  GPDGFSMAFFQDNWDGVKEDLMKVFRELISVG
        G DG ++ FFQ  WD +  D  +V  E    G
Subjt:  GPDGFSMAFFQDNWDGVKEDLMKVFRELISVG

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.2e-1228.19Show/hide
Query:  WRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSP-----APCSRPFLKGLDWNPILVLE--KENLEAPFS
        +RQK++ KW ++GD N+RFFH +    ++KN+I  L  +    +    +++E ++ ++ +L         P S   +K  D +P    +     L A  S
Subjt:  WRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSP-----APCSRPFLKGLDWNPILVLE--KENLEAPFS

Query:  LEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG
         +E+   VF   R+K+ GPD F+  FF ++W  VK+  +   +E    G
Subjt:  LEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVG

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.9e-0428.75Show/hide
Query:  WASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEGSLNTYFWEDTW
        +  ++EK + R   W     S  GRL LI  V+  + N+++  FR+P    + ++ +   FLW   E   LNT   +  W
Subjt:  WASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEGSLNTYFWEDTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTGGATGGTAATCTTTCGCGGGAGCTGTTTGAGGAAAGGTGTAGGTTGAAGGGTCTGTTTGGTGATATTCTTCGTAAGGAGGATCAAAGTTGGAGACAAAAAGC
TAAGTTCAAATGGGCCAAAGAAGGTGACTGTAATTCCAGGTTTTTCCATAGTTTGGCTAATGGGAGAAGAAGTAAGAATGTTATTTTTTCCTTGGTTAATGAGTCAGGGG
AGGTGCTGCGTGAGGATCAGAAAATTGAGGAGGAAGTGATTTTGTTCTTTAAGAATTTATACTCCCCAGCGCCGTGTTCCAGGCCTTTCTTGAAAGGATTGGATTGGAAC
CCCATCTTGGTGTTAGAGAAAGAAAATCTTGAAGCTCCCTTCTCGTTAGAAGAAGTTCGTAGGGTTGTGTTTGGCTTTGATAGAGATAAGTCCCTTGGCCCGGATGGTTT
CTCTATGGCGTTCTTTCAGGATAATTGGGATGGAGTTAAGGAGGACTTGATGAAAGTGTTTCGGGAACTAATCTCTGTTGGAGGGGAGGAAGGGGCTTTGGATGCTTTTG
AAGTGGGTAGGGAGAAAATTCGTCTCTCTCACCTTCAGTTTGCTGATGATACCATCCTTTTCTGTTCCGGCAATCCTAATGCGTTTAAAAATCTTAATTGCCTTCTCGGT
TTCTTCGAAGCCATTTCGGGTCACAATCCAAAGTCTGCTATCTTTTGGGCTTCGGTGTTGGAAAAGTTTCAGGAGCGCCCCTCTACTTGGAAGAAGGCCTTTTTCTCTAA
AAGAGGGAGACTCACGTTAATTCAATTTGTTCTCAAAGGCATTCCGAACTACTTTTTGCCCCTCTTCAGAATTCCAGTGACTGTGAATGAAGGGTTAGAGAAATTAATGA
GGGATTTTCTTTGGGAAAGTGTGGAGGAGGGGAGTCTTAATACGTACTTCTGGGAGGATACTTGGATAGGTGACAAACCTTTGTGTCTTGCTTTCCCTCGGATCTACTTT
CTTTCTGATAAGAAACTCCTTTCAGTGGCCGAGGTTTTAAGTCCTGGAGAAGAGGGTTTGTCCATCTCTTTGGGGCTCACCCGTTCCTTGACTGGTCGGGAATCGTCAGA
GGTTTCCGATTTACCGGATCAACTGTCTAGAGTTTCCTTATTTGTTGGGAGGGAAGATGTGAAGGGTGATGATGGAGGAAGTTTTGTTATTCCCCCCGTTTCGAGACAAA
GGGCGTTTTCTTTGGCGAGCGTGTTTTCTGGCTATTCTATGGGGTATTTGGCAGGAGAGAAACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTGGATGGTAATCTTTCGCGGGAGCTGTTTGAGGAAAGGTGTAGGTTGAAGGGTCTGTTTGGTGATATTCTTCGTAAGGAGGATCAAAGTTGGAGACAAAAAGC
TAAGTTCAAATGGGCCAAAGAAGGTGACTGTAATTCCAGGTTTTTCCATAGTTTGGCTAATGGGAGAAGAAGTAAGAATGTTATTTTTTCCTTGGTTAATGAGTCAGGGG
AGGTGCTGCGTGAGGATCAGAAAATTGAGGAGGAAGTGATTTTGTTCTTTAAGAATTTATACTCCCCAGCGCCGTGTTCCAGGCCTTTCTTGAAAGGATTGGATTGGAAC
CCCATCTTGGTGTTAGAGAAAGAAAATCTTGAAGCTCCCTTCTCGTTAGAAGAAGTTCGTAGGGTTGTGTTTGGCTTTGATAGAGATAAGTCCCTTGGCCCGGATGGTTT
CTCTATGGCGTTCTTTCAGGATAATTGGGATGGAGTTAAGGAGGACTTGATGAAAGTGTTTCGGGAACTAATCTCTGTTGGAGGGGAGGAAGGGGCTTTGGATGCTTTTG
AAGTGGGTAGGGAGAAAATTCGTCTCTCTCACCTTCAGTTTGCTGATGATACCATCCTTTTCTGTTCCGGCAATCCTAATGCGTTTAAAAATCTTAATTGCCTTCTCGGT
TTCTTCGAAGCCATTTCGGGTCACAATCCAAAGTCTGCTATCTTTTGGGCTTCGGTGTTGGAAAAGTTTCAGGAGCGCCCCTCTACTTGGAAGAAGGCCTTTTTCTCTAA
AAGAGGGAGACTCACGTTAATTCAATTTGTTCTCAAAGGCATTCCGAACTACTTTTTGCCCCTCTTCAGAATTCCAGTGACTGTGAATGAAGGGTTAGAGAAATTAATGA
GGGATTTTCTTTGGGAAAGTGTGGAGGAGGGGAGTCTTAATACGTACTTCTGGGAGGATACTTGGATAGGTGACAAACCTTTGTGTCTTGCTTTCCCTCGGATCTACTTT
CTTTCTGATAAGAAACTCCTTTCAGTGGCCGAGGTTTTAAGTCCTGGAGAAGAGGGTTTGTCCATCTCTTTGGGGCTCACCCGTTCCTTGACTGGTCGGGAATCGTCAGA
GGTTTCCGATTTACCGGATCAACTGTCTAGAGTTTCCTTATTTGTTGGGAGGGAAGATGTGAAGGGTGATGATGGAGGAAGTTTTGTTATTCCCCCCGTTTCGAGACAAA
GGGCGTTTTCTTTGGCGAGCGTGTTTTCTGGCTATTCTATGGGGTATTTGGCAGGAGAGAAACAATAG
Protein sequenceShow/hide protein sequence
MEVDGNLSRELFEERCRLKGLFGDILRKEDQSWRQKAKFKWAKEGDCNSRFFHSLANGRRSKNVIFSLVNESGEVLREDQKIEEEVILFFKNLYSPAPCSRPFLKGLDWN
PILVLEKENLEAPFSLEEVRRVVFGFDRDKSLGPDGFSMAFFQDNWDGVKEDLMKVFRELISVGGEEGALDAFEVGREKIRLSHLQFADDTILFCSGNPNAFKNLNCLLG
FFEAISGHNPKSAIFWASVLEKFQERPSTWKKAFFSKRGRLTLIQFVLKGIPNYFLPLFRIPVTVNEGLEKLMRDFLWESVEEGSLNTYFWEDTWIGDKPLCLAFPRIYF
LSDKKLLSVAEVLSPGEEGLSISLGLTRSLTGRESSEVSDLPDQLSRVSLFVGREDVKGDDGGSFVIPPVSRQRAFSLASVFSGYSMGYLAGEKQ