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Moc02g03010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g03010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationchr2:2290377..2291060
RNA-Seq ExpressionMoc02g03010
SyntenyMoc02g03010
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]1.6e-5653.81Show/hide
Query:  MSTPPLPAPAPAA----------LSSDGHTNQFQFTEEEEVKLLKCYLKIARS---AENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFA
        MSTP    P+ A+             +  T+Q  FT+E+E+ LLK YL+I+RS    +NS P+LDSPA DR++ A+GPKFS   IADKLHRLKLLYHKFA
Subjt:  MSTPPLPAPAPAA----------LSSDGHTNQFQFTEEEEVKLLKCYLKIARS---AENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFA

Query:  RTKSFVKTPHHRRILDIGRRIWGKSPTPTTR----TKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGL
        RTKSF+KTPH R+ILD+GR IWGKSPTP TR      P +++ R  ++ S T          ++ GVG   DL  FP+LV EFS+ FPGN VWRE +R +
Subjt:  RTKSFVKTPHHRRILDIGRRIWGKSPTPTTR----TKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGL

Query:  EEKILMGMNQNWVLLHIEEAELNARRAALLHHQLRS
        EEK L  MN+ WVLLHIE AEL ARRAALL  QL++
Subjt:  EEKILMGMNQNWVLLHIEEAELNARRAALLHHQLRS

KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]7.3e-5758.37Show/hide
Query:  MSTPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSA---ENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPH
        MSTP    P+ A+  +  H     F+EE+E+ LL CYL+IARSA    NSQP+LDSPALDRIE AL PKF+  HIADKLHRLKL YHK ARTKS +KTPH
Subjt:  MSTPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSA---ENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPH

Query:  HRRILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVL
        HRRIL+IGR IWGK   PT+RTKP  ++    R+           + ++      G DLN FP+L+ EFSR FPGN VW+E +RG+EEK L  MN+ WVL
Subjt:  HRRILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVL

Query:  LHIEEAELNARRAALLHHQLR
        LHIEEAEL ARRAALL  QLR
Subjt:  LHIEEAELNARRAALLHHQLR

KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5459.53Show/hide
Query:  APAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRRILDIGRR
        AP P   S      Q  FT+E+E+ LL CYL++A S +NSQP+LDSPALDRI  ALG KF   HIADKLHRLK+ YHKFARTKSF+KTPHH RIL+IGR 
Subjt:  APAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRRILDIGRR

Query:  IWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLHIEEAELNA
        IWGK   P  RTKP +VI R  R           SVAKK+     G DL  FP+LV EFSR FPGN VWRE ++G+EE  L GMN+ WVLLHIEEAEL A
Subjt:  IWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLHIEEAELNA

Query:  RRAALLHHQLRSTLT
        RR AL+  Q+ +T T
Subjt:  RRAALLHHQLRSTLT

KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]4.7e-5656.19Show/hide
Query:  TPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARS---AENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHR
        +PP  A       S+   +Q  F +E+E+ LL  YL+I+RS    +NS P+LDS A DR++ A+GPKFS   IADKLHRLKLLYHKFARTKSF+KTPH R
Subjt:  TPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARS---AENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHR

Query:  RILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLH
        +ILD+GR IWGKSPTP TR KP   ++  +R  S    Q   S+ +KE GVG   DL  FP+LV EFSR FPGN VWR+ +R + EK L  MN+ WVLLH
Subjt:  RILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLH

Query:  IEEAELNARRAALLHHQLRSTLTDTE
        IE AEL ARRAALL  QLR+T T+ +
Subjt:  IEEAELNARRAALLHHQLRSTLTDTE

XP_022756636.1 probable transcription factor At1g61730 [Durio zibethinus]6.9e-3139.11Show/hide
Query:  MSTPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRR
        MST P P+  P   SS        F+E +E ++L+C ++  +S      ++ +P ++RI + L  +FS   I DK+ RL++ YHK ARTKS V+T H RR
Subjt:  MSTPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRR

Query:  ILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGA-DLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLH
        I  + +RIWGK  TP              +K  E          + E G G G  DL+KFP LV EFSR+ P N VW+E M+GLEE+ L  M+Q WVL+ 
Subjt:  ILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGA-DLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLH

Query:  IEEAELNARRAALLHHQLRSTLTDT
        +EEA+L A++A L+  Q+   + +T
Subjt:  IEEAELNARRAALLHHQLRSTLTDT

TrEMBL top hitse value%identityAlignment
A0A0A0KAX7 Uncharacterized protein2.3e-5656.19Show/hide
Query:  TPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARS---AENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHR
        +PP  A       S+   +Q  F +E+E+ LL  YL+I+RS    +NS P+LDS A DR++ A+GPKFS   IADKLHRLKLLYHKFARTKSF+KTPH R
Subjt:  TPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARS---AENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHR

Query:  RILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLH
        +ILD+GR IWGKSPTP TR KP   ++  +R  S    Q   S+ +KE GVG   DL  FP+LV EFSR FPGN VWR+ +R + EK L  MN+ WVLLH
Subjt:  RILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLH

Query:  IEEAELNARRAALLHHQLRSTLTDTE
        IE AEL ARRAALL  QLR+T T+ +
Subjt:  IEEAELNARRAALLHHQLRSTLTDTE

A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like7.8e-5753.81Show/hide
Query:  MSTPPLPAPAPAA----------LSSDGHTNQFQFTEEEEVKLLKCYLKIARS---AENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFA
        MSTP    P+ A+             +  T+Q  FT+E+E+ LLK YL+I+RS    +NS P+LDSPA DR++ A+GPKFS   IADKLHRLKLLYHKFA
Subjt:  MSTPPLPAPAPAA----------LSSDGHTNQFQFTEEEEVKLLKCYLKIARS---AENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFA

Query:  RTKSFVKTPHHRRILDIGRRIWGKSPTPTTR----TKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGL
        RTKSF+KTPH R+ILD+GR IWGKSPTP TR      P +++ R  ++ S T          ++ GVG   DL  FP+LV EFS+ FPGN VWRE +R +
Subjt:  RTKSFVKTPHHRRILDIGRRIWGKSPTPTTR----TKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGL

Query:  EEKILMGMNQNWVLLHIEEAELNARRAALLHHQLRS
        EEK L  MN+ WVLLHIE AEL ARRAALL  QL++
Subjt:  EEKILMGMNQNWVLLHIEEAELNARRAALLHHQLRS

A0A6A2Z6N0 Uncharacterized protein8.2e-3038.39Show/hide
Query:  MSTPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRR
        MSTP    P P   + +G +++  F+E +E+++LKC ++  +S      ++ +P ++RI + L  KFS   I DKL RL+  YHK AR KS V+T H RR
Subjt:  MSTPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRR

Query:  ILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLHI
        I  + +RIWGK   P              +K +E  S+       KE GV    +L  F  LV EFSR+ PGN VW+E M G+ E  L  M+Q WV L +
Subjt:  ILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLHI

Query:  EEAELNARRAALLHHQLRSTLTDT
        EEA+L AR+A L+  Q+   + +T
Subjt:  EEAELNARRAALLHHQLRSTLTDT

A0A6J0ZSJ3 probable transcription factor At1g617309.0e-2935.91Show/hide
Query:  APAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRRILDIGRR
        A +P + + +G +++  F+E +E+++LKC  +  +S      ++ +  ++RI + L  KF+   I DKL RL+L YHK AR KS V+T H RRI  + +R
Subjt:  APAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRRILDIGRR

Query:  IWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAG---ADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLHIEEAE
        IWGK  + T   K                        ++E G G      +L KFP LV EFSR+ P N VW+E M+GLEE+ L  M+Q W+ + +EEA+
Subjt:  IWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAG---ADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLHIEEAE

Query:  LNARRAALLHHQLRSTLTDT
        L A++A L+  Q+   L +T
Subjt:  LNARRAALLHHQLRSTLTDT

A0A6P5ZW34 probable transcription factor At1g617303.3e-3139.11Show/hide
Query:  MSTPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRR
        MST P P+  P   SS        F+E +E ++L+C ++  +S      ++ +P ++RI + L  +FS   I DK+ RL++ YHK ARTKS V+T H RR
Subjt:  MSTPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRR

Query:  ILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGA-DLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLH
        I  + +RIWGK  TP              +K  E          + E G G G  DL+KFP LV EFSR+ P N VW+E M+GLEE+ L  M+Q WVL+ 
Subjt:  ILDIGRRIWGKSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGA-DLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLH

Query:  IEEAELNARRAALLHHQLRSTLTDT
        +EEA+L A++A L+  Q+   + +T
Subjt:  IEEAELNARRAALLHHQLRSTLTDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACGCCCCCGCTGCCGGCGCCGGCGCCGGCCGCCCTTTCTTCCGACGGCCACACCAATCAATTTCAATTCACGGAGGAGGAGGAAGTGAAGCTTCTCAAGTGCTA
CCTGAAAATCGCAAGATCCGCGGAGAATTCCCAACCCAGTCTGGATTCTCCGGCCTTGGATCGCATCGAGAGAGCCCTCGGCCCCAAATTCAGCCAGATCCACATCGCCG
ACAAGCTCCACAGGCTCAAGCTCCTGTACCACAAATTCGCCAGAACCAAGTCCTTCGTCAAGACCCCCCACCACCGCCGGATCCTCGACATCGGCCGCCGCATCTGGGGC
AAATCCCCCACCCCCACAACCAGAACAAAACCCCATAAGGTAATTTTACGCACAACCAGAAAAAATTCAGAAACCCCTTCTCAACTCTCATTCTCAGTAGCAAAAAAAGA
AGTAGGGGTTGGAGCTGGGGCTGATCTTAACAAGTTCCCTCTTCTCGTGGGCGAATTTTCTCGGCTGTTTCCGGGAAATGTGGTGTGGAGAGAGGTGATGAGGGGTCTAG
AGGAGAAGATTTTGATGGGTATGAATCAGAATTGGGTTTTGTTGCACATTGAAGAGGCAGAGTTGAACGCTAGAAGGGCTGCGTTATTACACCACCAACTCAGAAGCACA
CTCACAGACACTGAGGATCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACGCCCCCGCTGCCGGCGCCGGCGCCGGCCGCCCTTTCTTCCGACGGCCACACCAATCAATTTCAATTCACGGAGGAGGAGGAAGTGAAGCTTCTCAAGTGCTA
CCTGAAAATCGCAAGATCCGCGGAGAATTCCCAACCCAGTCTGGATTCTCCGGCCTTGGATCGCATCGAGAGAGCCCTCGGCCCCAAATTCAGCCAGATCCACATCGCCG
ACAAGCTCCACAGGCTCAAGCTCCTGTACCACAAATTCGCCAGAACCAAGTCCTTCGTCAAGACCCCCCACCACCGCCGGATCCTCGACATCGGCCGCCGCATCTGGGGC
AAATCCCCCACCCCCACAACCAGAACAAAACCCCATAAGGTAATTTTACGCACAACCAGAAAAAATTCAGAAACCCCTTCTCAACTCTCATTCTCAGTAGCAAAAAAAGA
AGTAGGGGTTGGAGCTGGGGCTGATCTTAACAAGTTCCCTCTTCTCGTGGGCGAATTTTCTCGGCTGTTTCCGGGAAATGTGGTGTGGAGAGAGGTGATGAGGGGTCTAG
AGGAGAAGATTTTGATGGGTATGAATCAGAATTGGGTTTTGTTGCACATTGAAGAGGCAGAGTTGAACGCTAGAAGGGCTGCGTTATTACACCACCAACTCAGAAGCACA
CTCACAGACACTGAGGATCAGTGA
Protein sequenceShow/hide protein sequence
MSTPPLPAPAPAALSSDGHTNQFQFTEEEEVKLLKCYLKIARSAENSQPSLDSPALDRIERALGPKFSQIHIADKLHRLKLLYHKFARTKSFVKTPHHRRILDIGRRIWG
KSPTPTTRTKPHKVILRTTRKNSETPSQLSFSVAKKEVGVGAGADLNKFPLLVGEFSRLFPGNVVWREVMRGLEEKILMGMNQNWVLLHIEEAELNARRAALLHHQLRST
LTDTEDQ