; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g04090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g04090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA repair protein RAD16
Genome locationchr2:3051695..3054400
RNA-Seq ExpressionMoc02g04090
SyntenyMoc02g04090
Gene Ontology termsGO:0000166 - nucleotide binding (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570890.1 hypothetical protein SDJN03_29805, partial [Cucurbita argyrosperma subsp. sororia]1.0e-8062.07Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML
        SFVAA   T+++AHI D+L+RLR+AVNHPYLVVYS+T+ I+CGS   TDN+NEQ CGICH  AE  V                               ML
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML

Query:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA
         ++FST L   D TIK  ++GFK +SILNRI LENF TSTKIEALREEI  M ERDGSAKGIV SQFTSF DLINYSLTKSGI+CVQL GS++L Q  DA
Subjt:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA

Query:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR
        ++RF+ DP C+I L++L AGG+A NLTVASHVFIMDPWWNPAVERQA DR+ +IG YKPIR
Subjt:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR

KAG7010739.1 RAD16, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-8061.69Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML
        +FVAA   T+++AHI D+L+RLR+AVNHPYLVVYS+T+ I+CGS   TDN+NEQ CGICH  AE  V                               ML
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML

Query:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA
         ++FST L   D TIK  ++GFK +SILNRI LENF TSTKIEALREEI  M ERDGSAKGIV SQFTSF DLINYSLTKSGI+CVQL GS++L Q  DA
Subjt:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA

Query:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR
        ++RF+ DP C+I L++L AGG+A NLTVASHVFIMDPWWNPAVERQA DR+ +IG YKPIR
Subjt:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR

XP_022140340.1 DNA repair protein RAD16 [Momordica charantia]1.7e-8860.59Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLV-------------------------------MLAV
        +FVAA   TN++AHI D+L+RLR+AVNHPYLVVYSKTSAINCGSSTDN+NEQ+CGICH  AEN V                               ML V
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLV-------------------------------MLAV

Query:  EFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAME
        +FS TL AGD+ +KTRV+GFKSSSILNRI L+NF TSTKIEALREEI LM ERDGSAKGIV SQFTSF DLINYSLTKSGI+CVQL GS++LAQ  D ++
Subjt:  EFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAME

Query:  RFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADMHKSVKEGGRND------L
        RFV D  C+I L++L AGGVA NLTVASHVFIMDPWWNPAVERQA DR+ +IG YKPIR        S EE  L    R ++      GG ++      L
Subjt:  RFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADMHKSVKEGGRND------L

Query:  ERLQHLF
        E ++ LF
Subjt:  ERLQHLF

XP_023512492.1 DNA repair protein RAD16 isoform X1 [Cucurbita pepo subsp. pepo]1.0e-8062.07Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML
        +FVAA   T+++AHI D+L+RLR+AVNHPYLVVYSKT+ I+CGS   TDN+NEQ CGICH  AE  V                               ML
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML

Query:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA
         ++FST L   D TIK  ++GFK +SILNRI LENF TSTKIEALREEI  M ERDGSAKGIV SQFTSF DLINYSLTKSGI+CVQL GS++L Q  DA
Subjt:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA

Query:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR
        ++RF+ DP C+I L++L AGG+A NLTVASHVFIMDPWWNPAVERQA DR+ +IG YKPIR
Subjt:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR

XP_038902046.1 ATP-dependent helicase rhp16 [Benincasa hispida]2.4e-8258.16Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTD-NSNEQLCGICHIAAENLV-------------------------------MLA
        +FVAA   T+++AHI D+L+RLR+AVNHPYLVVYSKT+AI+CGS  D ++N QLCGICH  AE  V                               ML 
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTD-NSNEQLCGICHIAAENLV-------------------------------MLA

Query:  VEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAM
        ++FST+L   D+T+K  ++GFKSSSILNRI LENF TSTKIEALREEI  MFERDGSAKGIV SQFTSF DLINYSLTKSGI+CVQL GS++L Q GDA+
Subjt:  VEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAM

Query:  ERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADMHKSVKEGGRND
         RF+ DP C+I L++L AGG+A NLTVAS+VFIMDPWWNPAVERQA DR+ +IG YKPIR        S EE  L    R ++      GG N+
Subjt:  ERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADMHKSVKEGGRND

TrEMBL top hitse value%identityAlignment
A0A0A0LN53 Uncharacterized protein3.5e-7954.69Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML
        +FVAA   T+++AHI D+L+RLR+AVNHPYLVVYSKT+AIN G+   +D++N+Q+CGIC+  AE  V                               ML
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML

Query:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA
          +F T++   D+T+K +++GFKSSSILNRI LENF TSTKIEALREEI  MFERDGSAKGIV SQFTSF DLINYSL+KSGI+CVQL GS++L Q  DA
Subjt:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA

Query:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADM------HKSVKEGGRN
        + RF+ DP C+I L++L AGGVA NLTVASHVFIMDPWWNPAVERQA DR+ +IG YKPIR        S EE  L    R ++       +S +  GR 
Subjt:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADM------HKSVKEGGRN

Query:  DLERLQHLF
         L+ +++LF
Subjt:  DLERLQHLF

A0A5D3DZG8 DNA repair protein RAD163.5e-7954.69Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML
        +FVAA   T+++AHI D+L+RLR+AVNHPYLVVYSKT AIN G+   +D++N+Q+CG+CH  AE  V                               ML
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML

Query:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA
          +F T++   D+T+K  ++GFKSSSILNRI LENF TSTKIEALREEI  MFERDGSAKGIV SQFTSF DLINYSL+KSGI+CVQL GS++L Q  DA
Subjt:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA

Query:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADM------HKSVKEGGRN
        + RF+ DP C+I L++L AGGVA NLTVASHVFIMDPWWNPAVERQA DR+ +IG YKPIR        S EE  L    R ++       +S +  GR 
Subjt:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADM------HKSVKEGGRN

Query:  DLERLQHLF
         L+ +++LF
Subjt:  DLERLQHLF

A0A6J1CET8 DNA repair protein RAD168.2e-8960.59Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLV-------------------------------MLAV
        +FVAA   TN++AHI D+L+RLR+AVNHPYLVVYSKTSAINCGSSTDN+NEQ+CGICH  AEN V                               ML V
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLV-------------------------------MLAV

Query:  EFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAME
        +FS TL AGD+ +KTRV+GFKSSSILNRI L+NF TSTKIEALREEI LM ERDGSAKGIV SQFTSF DLINYSLTKSGI+CVQL GS++LAQ  D ++
Subjt:  EFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAME

Query:  RFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADMHKSVKEGGRND------L
        RFV D  C+I L++L AGGVA NLTVASHVFIMDPWWNPAVERQA DR+ +IG YKPIR        S EE  L    R ++      GG ++      L
Subjt:  RFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCG----TRSSEETNLAFLTRADMHKSVKEGGRND------L

Query:  ERLQHLF
        E ++ LF
Subjt:  ERLQHLF

A0A6J1FYD3 DNA repair protein RAD161.1e-8061.69Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML
        +FVAA   T+++AHI D+L+RLR+AVNHPYLVVYS+T+ I+CGS   TDN+NEQ CGICH  AE  V                               ML
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLV-------------------------------ML

Query:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA
         ++FST L   D TIK  ++GFK +SILNRI LENF TSTKIEALREEI  M ERDGSAKGIV SQFTSF DLINYSLTKSGI+CVQL GS++L Q  DA
Subjt:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA

Query:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR
        ++RF+ DP C+I L++L AGG+A NLTVASHVFIMDPWWNPAVERQA DR+ +IG YKPIR
Subjt:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR

A0A6J1J723 DNA repair protein RAD167.0e-8060.92Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLVM-------------------------------L
        +FVAA   T+++AHI D+L+RLR+AVNHPYLVVYS+T+ I+CGS   TDN+NE  CGICH  AE  V+                               L
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGS--STDNSNEQLCGICHIAAENLVM-------------------------------L

Query:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA
         ++FST L   D+TIK  ++GFK +SILNRI LENF TSTKIEALREEI  M ERDGSAKGIV SQFTSF DLINYSLTKSGI+CVQL GS++L Q  DA
Subjt:  AVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDA

Query:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR
        ++RF+ DP C+I L++L AGG+A NLTVASHVFIMDPWWNPAVERQA DR+ +IG YKPIR
Subjt:  MERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR

SwissProt top hitse value%identityAlignment
P0CQ66 DNA repair protein RAD59.5e-2646.51Show/hide
Query:  NFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERF---VHDPYCRILLINLNAGGVAHNLTVASH
        + +TSTK+ AL  ++  + + D  AK +V SQFTSF DLI  +LTK GI  ++  G+++ AQ  + +E F    ++P   ILLI+L AGGV  NLT+A++
Subjt:  NFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERF---VHDPYCRILLINLNAGGVAHNLTVASH

Query:  VFIMDPWWNPAVERQALDRVRQIGAYKPI
        VF+MD WWN A+E+QA+DRV ++G  KP+
Subjt:  VFIMDPWWNPAVERQALDRVRQIGAYKPI

P0CQ67 DNA repair protein RAD59.5e-2646.51Show/hide
Query:  NFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERF---VHDPYCRILLINLNAGGVAHNLTVASH
        + +TSTK+ AL  ++  + + D  AK +V SQFTSF DLI  +LTK GI  ++  G+++ AQ  + +E F    ++P   ILLI+L AGGV  NLT+A++
Subjt:  NFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERF---VHDPYCRILLINLNAGGVAHNLTVASH

Query:  VFIMDPWWNPAVERQALDRVRQIGAYKPI
        VF+MD WWN A+E+QA+DRV ++G  KP+
Subjt:  VFIMDPWWNPAVERQALDRVRQIGAYKPI

P31244 DNA repair protein RAD166.2e-3333.33Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVY-------SKTSAINCGSSTDNSNEQLCGICH-----IAAENLVMLAVEFSTTLTA-----------
        SFV      N++A+I  ++ R+R+  +HP LV+             + C    D + E +   CH     +  +  V   +E +  LT            
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVY-------SKTSAINCGSSTDNSNEQLCGICH-----IAAENLVMLAVEFSTTLTA-----------

Query:  GDETIKTRVEGFKSSSILNRIPLE-NFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPY
            ++  ++ FK  SI++R+ +   + +STKIEAL EE+  +     + K IV SQFTS  DL+ + L ++G   V+L GS++  Q  + ++ F+++  
Subjt:  GDETIKTRVEGFKSSSILNRIPLE-NFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPY

Query:  CRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR
        C + L++L AGGVA NL  AS VFI+DPWWNP+VE Q+ DRV +IG Y+P++
Subjt:  CRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR

P79051 ATP-dependent helicase rhp161.9e-3734.34Show/hide
Query:  NDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLV----------MLAVEFSTTLTAGDET------IKTRV-------
        N++A+I  ++ R+R+  +HP LV+ SK   ++     +N    +C IC   A++ +          +   E+      G+        I   +       
Subjt:  NDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLV----------MLAVEFSTTLTAGDET------IKTRV-------

Query:  -----EGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILL
             E FK++SILNRI + ++ +STKIEAL EE+ L+ ++D + K IV SQFTS  DLI++ L K+G +CV+L G +        +E F +D    I L
Subjt:  -----EGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILL

Query:  INLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR----CGTRSSE------ETNLAFLTRADMHKSVKEGGRNDLERLQHLFSS
        ++L AGGVA NLT AS VF+MDPWWN AV+ QA+DR+ +IG  +PI+    C   S E      +   A +  A + +  K   +  +E +Q LFS+
Subjt:  INLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR----CGTRSSE------ETNLAFLTRADMHKSVKEGGRNDLERLQHLFSS

Q9FNI6 DNA repair protein RAD5A7.6e-2342.19Show/hide
Query:  ENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVF
        +N++ S+KI AL EE+  +  R   +K I+ SQ+T+F DL+   L+++  S V+L G+++  Q    ++ F  D    +LL++L AGGV  NLT AS+ F
Subjt:  ENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVF

Query:  IMDPWWNPAVERQALDRVRQIGAYKPIR
        +MDPWWNPAVE QA+ R+ +IG  K ++
Subjt:  IMDPWWNPAVERQALDRVRQIGAYKPIR

Arabidopsis top hitse value%identityAlignment
AT1G02670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.1e-6449.25Show/hide
Query:  FVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLVMLAVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLE
        ++ A    N++AHI  +L+RLR+AV+HPYLV YS  S  N      N NE+ CG  H  +++  + + E   +        KT+++GF++SSILNRI L+
Subjt:  FVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLVMLAVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLE

Query:  NFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVFI
        +F TSTKIEALREEI  M ERD SAK IV SQFTSF DLI+Y+L KSG+SCVQL GS++ A    A++ F  +P CR+LL++L AGGVA NLT ASHVF+
Subjt:  NFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVFI

Query:  MDPWWNPAVERQALDRVRQIGAYKPIRCGTRSSEETNLAFLTRADMHKSVKEGGRNDLERLQHLFSSS
        MDPWWNPAVERQA DR+ +IG  KP+R             + R  M K+V+E      ++ + LF S+
Subjt:  MDPWWNPAVERQALDRVRQIGAYKPIRCGTRSSEETNLAFLTRADMHKSVKEGGRNDLERLQHLFSSS

AT1G05120.1 Helicase protein with RING/U-box domain5.0e-7052.71Show/hide
Query:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLV------------------------------MLAVE
        +++ A    N++AHI D+L RLR+AV+HPYLVVYS +S  N     +N +EQ CG+CH  AE+ V                              +L V+
Subjt:  SFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLV------------------------------MLAVE

Query:  FSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMER
        ++T      +  KT ++GF++SSILNRI L++F TSTKIEALREEI  M ERDGSAK IV SQFTSF DLINY+L K G+SCVQL GS+ +A    A+ +
Subjt:  FSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMER

Query:  FVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR
        F  DP CR+ L++L AGGVA NLTVASHVF+MDPWWNPAVERQA DR+ +IG YKPIR
Subjt:  FVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIR

AT3G20010.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related2.6e-1837.5Show/hide
Query:  GSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGA
        G+ K I+ SQ+T   DL+   + +SGI   +L G+++LA    A++ F   P  +++L++L AG +  N+  A HV ++D WWNP  E QA+DR  +IG 
Subjt:  GSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGA

Query:  YKPI
         +P+
Subjt:  YKPI

AT5G22750.1 DNA/RNA helicase protein5.4e-2442.19Show/hide
Query:  ENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVF
        +N++ S+KI AL EE+  +  R   +K I+ SQ+T+F DL+   L+++  S V+L G+++  Q    ++ F  D    +LL++L AGGV  NLT AS+ F
Subjt:  ENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVF

Query:  IMDPWWNPAVERQALDRVRQIGAYKPIR
        +MDPWWNPAVE QA+ R+ +IG  K ++
Subjt:  IMDPWWNPAVERQALDRVRQIGAYKPIR

AT5G43530.1 Helicase protein with RING/U-box domain1.3e-2229.41Show/hide
Query:  FVAAERETNDFAHIDDILVRLRKAVNHPYLVV-------YSKTSAI-------NCGSSTDNS----------------NEQLCGICHIAAENLVMLAVEF
        FVA  +  +++A+I ++L+RLR+  NHP+LV+       Y+   ++       N  S + N+                N + C IC  +A++ V+     
Subjt:  FVAAERETNDFAHIDDILVRLRKAVNHPYLVV-------YSKTSAI-------NCGSSTDNS----------------NEQLCGICHIAAENLVMLAVEF

Query:  --------------STTLTAGDETIKTRVE--GFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQL
                      S  L     TI  R E     + SI     ++N+  S+K+  L + +  + +     K IV SQ+TSF DL+   L + G   ++ 
Subjt:  --------------STTLTAGDETIKTRVE--GFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQL

Query:  TGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPI
         G +        ++ F       ILL++L AGGV  NLT AS VF+MDPWWNPAVE QA+ R+ +IG  + +
Subjt:  TGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGATGGTTGTTTTTCTTTGTAGTTTTGTGGCAGCAGAAAGGGAAACAAATGATTTTGCACACATAGATGACATCTTGGTTCGCTTGAGAAAGGCAGTCAATCA
TCCATATCTTGTGGTGTACTCTAAAACTTCTGCCATAAATTGTGGAAGCTCTACTGATAATAGTAATGAACAACTATGTGGAATTTGTCATATAGCAGCAGAAAATCTTG
TGATGCTCGCGGTTGAATTTAGCACAACTCTGACTGCTGGGGACGAAACCATCAAAACAAGAGTTGAGGGGTTTAAATCTTCAAGTATACTTAACAGAATACCGCTGGAG
AATTTTCTTACAAGCACAAAAATAGAAGCTTTGAGAGAAGAAATTATATTGATGTTTGAACGAGATGGATCTGCAAAAGGAATAGTTCTCAGCCAATTCACTTCGTTTTC
AGATCTCATTAACTATTCCTTAACAAAGTCCGGCATTTCCTGTGTTCAATTAACAGGAAGCATAAACTTGGCTCAAGGAGGTGATGCCATGGAGAGGTTTGTTCACGATC
CATATTGCAGGATTTTATTGATCAACTTGAACGCTGGAGGAGTTGCTCATAATCTTACCGTCGCATCGCATGTCTTTATCATGGACCCTTGGTGGAATCCAGCAGTGGAA
CGGCAAGCCCTAGACAGAGTCCGTCAAATTGGAGCATACAAACCTATCAGGTGTGGGACAAGGTCTAGTGAAGAAACTAACTTGGCATTTTTGACAAGAGCAGATATGCA
TAAATCTGTCAAAGAGGGAGGACGCAATGACTTGGAGCGGCTACAACACTTATTCTCCTCCTCGGAAGACATTGTAAGTGGTATACCTTTCATTCAATTGCTAGCAATCG
TCATGGCAGTGGAGAAAGGCTTCGGCCAATCTTCAATATTGTCATCAGTTTTAGCAGCCCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGATGGTTGTTTTTCTTTGTAGTTTTGTGGCAGCAGAAAGGGAAACAAATGATTTTGCACACATAGATGACATCTTGGTTCGCTTGAGAAAGGCAGTCAATCA
TCCATATCTTGTGGTGTACTCTAAAACTTCTGCCATAAATTGTGGAAGCTCTACTGATAATAGTAATGAACAACTATGTGGAATTTGTCATATAGCAGCAGAAAATCTTG
TGATGCTCGCGGTTGAATTTAGCACAACTCTGACTGCTGGGGACGAAACCATCAAAACAAGAGTTGAGGGGTTTAAATCTTCAAGTATACTTAACAGAATACCGCTGGAG
AATTTTCTTACAAGCACAAAAATAGAAGCTTTGAGAGAAGAAATTATATTGATGTTTGAACGAGATGGATCTGCAAAAGGAATAGTTCTCAGCCAATTCACTTCGTTTTC
AGATCTCATTAACTATTCCTTAACAAAGTCCGGCATTTCCTGTGTTCAATTAACAGGAAGCATAAACTTGGCTCAAGGAGGTGATGCCATGGAGAGGTTTGTTCACGATC
CATATTGCAGGATTTTATTGATCAACTTGAACGCTGGAGGAGTTGCTCATAATCTTACCGTCGCATCGCATGTCTTTATCATGGACCCTTGGTGGAATCCAGCAGTGGAA
CGGCAAGCCCTAGACAGAGTCCGTCAAATTGGAGCATACAAACCTATCAGGTGTGGGACAAGGTCTAGTGAAGAAACTAACTTGGCATTTTTGACAAGAGCAGATATGCA
TAAATCTGTCAAAGAGGGAGGACGCAATGACTTGGAGCGGCTACAACACTTATTCTCCTCCTCGGAAGACATTGTAAGTGGTATACCTTTCATTCAATTGCTAGCAATCG
TCATGGCAGTGGAGAAAGGCTTCGGCCAATCTTCAATATTGTCATCAGTTTTAGCAGCCCCCTAA
Protein sequenceShow/hide protein sequence
MSLMVVFLCSFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLVMLAVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLE
NFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVE
RQALDRVRQIGAYKPIRCGTRSSEETNLAFLTRADMHKSVKEGGRNDLERLQHLFSSSEDIVSGIPFIQLLAIVMAVEKGFGQSSILSSVLAAP