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Moc02g04340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g04340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-H2 finger protein ATL64
Genome locationchr2:3216572..3216988
RNA-Seq ExpressionMoc02g04340
SyntenyMoc02g04340
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010790.1 RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-4465.33Show/hide
Query:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV
        MLGLIFL+S + L +IF    V IPLF +K+AIL +A+VFR +S P            RRYEEL+R +D T E+E MCSICLTEFAR+DSV +LPDCAHV
Subjt:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV

Query:  FHINCIEKWMERNNFTCPLCRCFFNIENRPE-KLRFVIPDNPSCLYYFLQ
        FH +CIEKW ERN FTCPLCRCFFNIE   E KLRFV+PDNPS LYYFLQ
Subjt:  FHINCIEKWMERNNFTCPLCRCFFNIENRPE-KLRFVIPDNPSCLYYFLQ

XP_022140627.1 RING-H2 finger protein ATL64 [Momordica charantia]1.2e-70100Show/hide
Query:  MRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        MRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
Subjt:  MRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Query:  CFFNIENRPEKLRFVIPDNPSCLYYFLQ
        CFFNIENRPEKLRFVIPDNPSCLYYFLQ
Subjt:  CFFNIENRPEKLRFVIPDNPSCLYYFLQ

XP_022944066.1 RING-H2 finger protein ATL18-like [Cucurbita moschata]1.6e-4365.33Show/hide
Query:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV
        MLGLIFL+S + L +IF    V IPLF +K+AIL +A+VFR  S P            RRYEEL +R+D  AE+E MCSICLTEFAR+DSV +LPDCAHV
Subjt:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV

Query:  FHINCIEKWMERNNFTCPLCRCFFNIENRPE-KLRFVIPDNPSCLYYFLQ
        FH +CIEKW ERN FTCPLCRCFFNIE   E KLRFV+PDNPS LYYFLQ
Subjt:  FHINCIEKWMERNNFTCPLCRCFFNIENRPE-KLRFVIPDNPSCLYYFLQ

XP_023512248.1 RING-H2 finger protein ATL18-like [Cucurbita pepo subsp. pepo]5.6e-4465.33Show/hide
Query:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV
        MLGLIFL+S + L +IF    V IPLF +K+AIL +A+VFR +S P            RRYEEL+R +D T E+E MCSICLTEFAR+DSV +LPDCAHV
Subjt:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV

Query:  FHINCIEKWMERNNFTCPLCRCFFNIENRPE-KLRFVIPDNPSCLYYFLQ
        FH +CIEKW ERN FTCPLCRCFFNIE   E KLRFV+PDNPS LYYFLQ
Subjt:  FHINCIEKWMERNNFTCPLCRCFFNIENRPE-KLRFVIPDNPSCLYYFLQ

XP_038902378.1 probable E3 ubiquitin-protein ligase RHA4A [Benincasa hispida]7.1e-3958.71Show/hide
Query:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV
        MLG IFL+S +R         + I LF+L QAIL++AT+FR  S P            R YEEL+R +D   ++E +CSICL EFAR+DSVYELPDC HV
Subjt:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV

Query:  FHINCIEKWMERNNFTCPLCRC-FFNIENRPEK-----LRFVIPDNPSCLYYFLQ
        +H NCIEKW+ERN FTCPLCRC FFNI+NR EK     L FV+PDNPSCLYYFLQ
Subjt:  FHINCIEKWMERNNFTCPLCRC-FFNIENRPEK-----LRFVIPDNPSCLYYFLQ

TrEMBL top hitse value%identityAlignment
A0A5A7TXY0 RING-H2 finger protein ATL18-like1.5e-3152.67Show/hide
Query:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILS-LATVFRFSSPPG--------RRYEELRRRNDGTAEDEVMCSICLTEFAR-QDSVYELPDCAHVF
        MLGL +L S MR P++F    + IPLF +KQAIL  +ATVF   S P         R Y+E     D     E +CSICLTEF R +DSV +LP+C H+F
Subjt:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILS-LATVFRFSSPPG--------RRYEELRRRNDGTAEDEVMCSICLTEFAR-QDSVYELPDCAHVF

Query:  HINCIEKWMERNNFTCPLCRCFFNIENR--PEKLRFVIPDNPSCLYYFLQ
        H NCI++W++RN FTCPLCRCFF  +N     K RF++PDNPS LYYFLQ
Subjt:  HINCIEKWMERNNFTCPLCRCFFNIENR--PEKLRFVIPDNPSCLYYFLQ

A0A6J1CHK3 RING-H2 finger protein ATL645.8e-71100Show/hide
Query:  MRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        MRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
Subjt:  MRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Query:  CFFNIENRPEKLRFVIPDNPSCLYYFLQ
        CFFNIENRPEKLRFVIPDNPSCLYYFLQ
Subjt:  CFFNIENRPEKLRFVIPDNPSCLYYFLQ

A0A6J1FTE6 RING-H2 finger protein ATL18-like7.9e-4465.33Show/hide
Query:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV
        MLGLIFL+S + L +IF    V IPLF +K+AIL +A+VFR  S P            RRYEEL +R+D  AE+E MCSICLTEFAR+DSV +LPDCAHV
Subjt:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHV

Query:  FHINCIEKWMERNNFTCPLCRCFFNIENRPE-KLRFVIPDNPSCLYYFLQ
        FH +CIEKW ERN FTCPLCRCFFNIE   E KLRFV+PDNPS LYYFLQ
Subjt:  FHINCIEKWMERNNFTCPLCRCFFNIENRPE-KLRFVIPDNPSCLYYFLQ

A0A6J1G855 E3 ubiquitin-protein ligase ATL41-like1.1e-3460Show/hide
Query:  LPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMER
        L + F    V IPL  LK AI+   +VFR +  P            RRYEEL +R+D  AE+E+ CSICL EFAR DSV  LPDC+HVFH +CIEKW+ER
Subjt:  LPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMER

Query:  NNFTCPLCRC--FFNIENRPE-KLRFVIPDNPSCLYYFLQ
        N FTCPLCRC  FFNI NR E KL+FV+PDNPSCLYYFLQ
Subjt:  NNFTCPLCRC--FFNIENRPE-KLRFVIPDNPSCLYYFLQ

A0A6J1I5X8 RING-H2 finger protein ATL185.7e-3461.31Show/hide
Query:  IFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNF
        IF    V IPL  LK AI+   +VFR +  P            RRYEEL+RR D  AE+E+ CSICL EFAR DSV  L DC+HVFH +CIEKW+ERN F
Subjt:  IFVYDLVCIPLFHLKQAILSLATVFRFSSPPG-----------RRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNF

Query:  TCPLCRC--FFNIENRPE-KLRFVIPDNPSCLYYFLQ
        TCPLCRC  FFNI NR E KL+FV+PDNPSCLYYFLQ
Subjt:  TCPLCRC--FFNIENRPE-KLRFVIPDNPSCLYYFLQ

SwissProt top hitse value%identityAlignment
O22255 RING-H2 finger protein ATL642.5e-1039.02Show/hide
Query:  LKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        L QA+L    +F +SS           +N    E++  CS+CL+EF  +D    LP C H FH++CI+ W  R+  TCPLCR
Subjt:  LKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Q8GW38 RING-H2 finger protein ATL474.2e-1041.18Show/hide
Query:  LFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        LFHL  + L  A +    + P   Y+E++    GT E    C++CL EF+  D +  LP+C+H FHI+CI+ W+  +N TCPLCR
Subjt:  LFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Q9FL07 RING-H2 finger protein ATL463.8e-1137.78Show/hide
Query:  LFHLKQAILSLATVFRFSSPPGRRYEEL-----RRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        LFHL  + L  A +    + P   Y+E+         +G A++   C++CL EF+ +D +  LP C+H FH+NCI+ W++ N+ TCPLCR
Subjt:  LFHLKQAILSLATVFRFSSPPGRRYEEL-----RRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Q9LSW9 RING-H2 finger protein ATL163.2e-1034.48Show/hide
Query:  LKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDE-----VMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        L ++++    +F+F     +RY++      G  E+E       CS+CL+EF  ++ +  +P+C+H+FHI+CI+ W++ NN  CPLCR
Subjt:  LKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDE-----VMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Q9SZL4 RING-H2 finger protein ATL181.1e-1337.29Show/hide
Query:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRR------NDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINC
        M+ ++F  S +    I  Y  VCIPL  LK+           +      +++           D   E+E+ C ICL EF  +D+V  LP CAH+FHINC
Subjt:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRR------NDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINC

Query:  IEKWMERNNFTCPLCRCF
        IE W+ R + TCPLCR F
Subjt:  IEKWMERNNFTCPLCRCF

Arabidopsis top hitse value%identityAlignment
AT1G23980.1 RING/U-box superfamily protein3.0e-1141.18Show/hide
Query:  LFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        LFHL  + L  A +    + P   Y+E++    GT E    C++CL EF+  D +  LP+C+H FHI+CI+ W+  +N TCPLCR
Subjt:  LFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

AT2G47560.1 RING/U-box superfamily protein1.8e-1139.02Show/hide
Query:  LKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        L QA+L    +F +SS           +N    E++  CS+CL+EF  +D    LP C H FH++CI+ W  R+  TCPLCR
Subjt:  LKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

AT4G38140.1 RING/U-box superfamily protein7.6e-1537.29Show/hide
Query:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRR------NDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINC
        M+ ++F  S +    I  Y  VCIPL  LK+           +      +++           D   E+E+ C ICL EF  +D+V  LP CAH+FHINC
Subjt:  MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRR------NDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINC

Query:  IEKWMERNNFTCPLCRCF
        IE W+ R + TCPLCR F
Subjt:  IEKWMERNNFTCPLCRCF

AT5G40250.1 RING/U-box superfamily protein2.7e-1237.78Show/hide
Query:  LFHLKQAILSLATVFRFSSPPGRRYEEL-----RRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        LFHL  + L  A +    + P   Y+E+         +G A++   C++CL EF+ +D +  LP C+H FH+NCI+ W++ N+ TCPLCR
Subjt:  LFHLKQAILSLATVFRFSSPPGRRYEEL-----RRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

AT5G43420.1 RING/U-box superfamily protein2.3e-1134.48Show/hide
Query:  LKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDE-----VMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        L ++++    +F+F     +RY++      G  E+E       CS+CL+EF  ++ +  +P+C+H+FHI+CI+ W++ NN  CPLCR
Subjt:  LKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDE-----VMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGGCTCATTTTTCTCCACTCGCTTATGCGATTGCCCCTCATTTTCGTCTACGATCTCGTATGTATCCCGCTGTTTCACCTCAAGCAAGCCATTCTCAGCCTTGC
TACCGTTTTCCGGTTCTCTTCTCCGCCCGGGAGAAGATACGAAGAGCTACGACGGAGGAACGACGGTACAGCGGAGGACGAGGTCATGTGCTCCATCTGTTTGACGGAAT
TCGCGAGACAAGATTCCGTGTACGAACTTCCCGATTGTGCGCACGTCTTCCATATCAATTGCATCGAGAAGTGGATGGAGAGGAACAACTTCACCTGCCCGCTCTGTAGG
TGCTTCTTCAACATCGAGAATCGCCCTGAGAAACTCCGCTTTGTCATTCCAGATAATCCTTCTTGCCTCTATTATTTCTTGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGGCTCATTTTTCTCCACTCGCTTATGCGATTGCCCCTCATTTTCGTCTACGATCTCGTATGTATCCCGCTGTTTCACCTCAAGCAAGCCATTCTCAGCCTTGC
TACCGTTTTCCGGTTCTCTTCTCCGCCCGGGAGAAGATACGAAGAGCTACGACGGAGGAACGACGGTACAGCGGAGGACGAGGTCATGTGCTCCATCTGTTTGACGGAAT
TCGCGAGACAAGATTCCGTGTACGAACTTCCCGATTGTGCGCACGTCTTCCATATCAATTGCATCGAGAAGTGGATGGAGAGGAACAACTTCACCTGCCCGCTCTGTAGG
TGCTTCTTCAACATCGAGAATCGCCCTGAGAAACTCCGCTTTGTCATTCCAGATAATCCTTCTTGCCTCTATTATTTCTTGCAGTGA
Protein sequenceShow/hide protein sequence
MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
CFFNIENRPEKLRFVIPDNPSCLYYFLQ