; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g04480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g04480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type domain-containing protein
Genome locationchr2:3336499..3337755
RNA-Seq ExpressionMoc02g04480
SyntenyMoc02g04480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044249 - Probable E3 ubiquitin-protein ligase XERICO-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010803.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-6588.32Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHLSSPT--SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCG
        L +TALSISIFKG+VRSILHVVGIHLSSPT  SS DSMENAPES+EF LNPNGSYIEEFRSRIPAIL++KVHSCK LE DCSVCLTQF P+SEINHLSCG
Subjt:  LHSTALSISIFKGLVRSILHVVGIHLSSPT--SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCG

Query:  HLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        HLFHRVCLEKWLDYWNLTCPLCRTP MPEE+TASCFW
Subjt:  HLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

XP_004139989.1 probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus]1.3e-6690.58Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHL-SSPT--SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSC
        L +TALSISIFKG+VRSILHVVGIHL SSPT  SS DSMENAPES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSC
Subjt:  LHSTALSISIFKGLVRSILHVVGIHL-SSPT--SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSC

Query:  GHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        GHLFHRVCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Subjt:  GHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

XP_008448128.1 PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo]1.1e-6587.77Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHLSSPT----SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLS
        L +TALSISIFKG+VRSILHVVGIHLSS +    SS DSMENAPES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLS
Subjt:  LHSTALSISIFKGLVRSILHVVGIHLSSPT----SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLS

Query:  CGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        CGHLFH VCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Subjt:  CGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

XP_022140382.1 probable E3 ubiquitin-protein ligase XERICO [Momordica charantia]2.5e-7398.52Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL
        L +TALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL
Subjt:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL

Query:  FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
Subjt:  FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

XP_022947327.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]1.9e-6587.41Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL
        L +TA+SISIFKG+VRSILHVVGIHLS+P SS+DSMEN+PES++F LNPNG YIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGH+
Subjt:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL

Query:  FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        FHRVCLEKWLDYWN+TCPLCRTPLMPEEETASCFW
Subjt:  FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

TrEMBL top hitse value%identityAlignment
A0A0A0KAU4 RING-type domain-containing protein6.4e-6790.58Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHL-SSPT--SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSC
        L +TALSISIFKG+VRSILHVVGIHL SSPT  SS DSMENAPES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSC
Subjt:  LHSTALSISIFKGLVRSILHVVGIHL-SSPT--SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSC

Query:  GHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        GHLFHRVCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Subjt:  GHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

A0A1S3BIY9 probable E3 ubiquitin-protein ligase XERICO5.4e-6687.77Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHLSSPT----SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLS
        L +TALSISIFKG+VRSILHVVGIHLSS +    SS DSMENAPES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLS
Subjt:  LHSTALSISIFKGLVRSILHVVGIHLSSPT----SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLS

Query:  CGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        CGHLFH VCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Subjt:  CGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

A0A5D3DTM0 Putative E3 ubiquitin-protein ligase XERICO5.4e-6687.77Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHLSSPT----SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLS
        L +TALSISIFKG+VRSILHVVGIHLSS +    SS DSMENAPES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLS
Subjt:  LHSTALSISIFKGLVRSILHVVGIHLSSPT----SSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLS

Query:  CGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        CGHLFH VCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Subjt:  CGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

A0A6J1CGP1 probable E3 ubiquitin-protein ligase XERICO1.2e-7398.52Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL
        L +TALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL
Subjt:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL

Query:  FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
Subjt:  FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

A0A6J1G653 probable E3 ubiquitin-protein ligase XERICO9.3e-6687.41Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL
        L +TA+SISIFKG+VRSILHVVGIHLS+P SS+DSMEN+PES++F LNPNG YIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGH+
Subjt:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL

Query:  FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
        FHRVCLEKWLDYWN+TCPLCRTPLMPEEETASCFW
Subjt:  FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

SwissProt top hitse value%identityAlignment
Q9SI09 Probable E3 ubiquitin-protein ligase XERICO5.6e-3652.67Show/hide
Query:  PFEIRTVTCLHSTALSISIFKGLVRSILHVVGIHL----SSPTSSADSMENA--PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSC-KWLEQDCSVCLT
        P E      L +TALSISI KG+VRS L +VGI L    SSP+S   S EN+   ES +FR+    SY+EEFR+R P + ++ +  C K  + +CSVCL+
Subjt:  PFEIRTVTCLHSTALSISIFKGLVRSILHVVGIHL----SSPTSSADSMENA--PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSC-KWLEQDCSVCLT

Query:  QFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPL--MPEEETAS
        +F+ +SEIN L CGHLFH+ CLEKW+DYWN+TCPLCRTPL  +PE+   S
Subjt:  QFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPL--MPEEETAS

Q9SUS5 E3 ubiquitin-protein ligase RHA1B2.6e-0941.94Show/hide
Query:  EQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWL-DYWNLTCPLCRTPLMPEEETASCFW
        E  C+VCL+ F  + +I  L  CGH+FH  CL++W+ D   +TCP+CR   +PEE++    W
Subjt:  EQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWL-DYWNLTCPLCRTPLMPEEETASCFW

Q9XF92 Brassinosteroid-responsive RING protein 16.1e-1446.58Show/hide
Query:  RSRIPAILYDKV-HSCKWLEQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEE
        R  +P I ++++ +S + L ++C+VCL +FE E EI  L +C H+FHR CL++W+D+   TCPLCRTP +P+E
Subjt:  RSRIPAILYDKV-HSCKWLEQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEE

Q9ZT50 E3 ubiquitin-protein ligase RHA2A6.9e-1047.06Show/hide
Query:  DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEE
        DC VCL++ +   E+  L C H+FH+ CLE WL  +N TCPLCR+ L+ ++
Subjt:  DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEE

Q9ZU51 E3 ubiquitin-protein ligase RHA2B8.2e-1151.02Show/hide
Query:  DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMP
        DC VCL++ +   E+  L C H+FH+ CLE WL + N  CPLCR+PL+P
Subjt:  DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMP

Arabidopsis top hitse value%identityAlignment
AT2G01150.1 RING-H2 finger protein 2B5.8e-1251.02Show/hide
Query:  DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMP
        DC VCL++ +   E+  L C H+FH+ CLE WL + N  CPLCR+PL+P
Subjt:  DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMP

AT2G04240.1 RING/U-box superfamily protein4.0e-3752.67Show/hide
Query:  PFEIRTVTCLHSTALSISIFKGLVRSILHVVGIHL----SSPTSSADSMENA--PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSC-KWLEQDCSVCLT
        P E      L +TALSISI KG+VRS L +VGI L    SSP+S   S EN+   ES +FR+    SY+EEFR+R P + ++ +  C K  + +CSVCL+
Subjt:  PFEIRTVTCLHSTALSISIFKGLVRSILHVVGIHL----SSPTSSADSMENA--PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSC-KWLEQDCSVCLT

Query:  QFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPL--MPEEETAS
        +F+ +SEIN L CGHLFH+ CLEKW+DYWN+TCPLCRTPL  +PE+   S
Subjt:  QFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPL--MPEEETAS

AT2G04240.2 RING/U-box superfamily protein4.0e-3752.67Show/hide
Query:  PFEIRTVTCLHSTALSISIFKGLVRSILHVVGIHL----SSPTSSADSMENA--PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSC-KWLEQDCSVCLT
        P E      L +TALSISI KG+VRS L +VGI L    SSP+S   S EN+   ES +FR+    SY+EEFR+R P + ++ +  C K  + +CSVCL+
Subjt:  PFEIRTVTCLHSTALSISIFKGLVRSILHVVGIHL----SSPTSSADSMENA--PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSC-KWLEQDCSVCLT

Query:  QFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPL--MPEEETAS
        +F+ +SEIN L CGHLFH+ CLEKW+DYWN+TCPLCRTPL  +PE+   S
Subjt:  QFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPL--MPEEETAS

AT3G43430.1 RING/U-box superfamily protein3.1e-1334.06Show/hide
Query:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFR---SRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHL-S
        L+ TAL I++ + +   IL     + S  +SS+ S  ++  S+  +       +  FR    R PA + D           C+VCL   E E EI  L +
Subjt:  LHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFR---SRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHL-S

Query:  CGHLFHRVCLEKWLDYW--------NLTCPLCRTPLMP
        C H+FHR C+++WLDY         + TCPLCRTPL+P
Subjt:  CGHLFHRVCLEKWLDYW--------NLTCPLCRTPLMP

AT3G61460.1 brassinosteroid-responsive RING-H24.3e-1546.58Show/hide
Query:  RSRIPAILYDKV-HSCKWLEQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEE
        R  +P I ++++ +S + L ++C+VCL +FE E EI  L +C H+FHR CL++W+D+   TCPLCRTP +P+E
Subjt:  RSRIPAILYDKV-HSCKWLEQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTGGATCCCTTGGATTCTTCTGGGAAGTTTTGGATTTGATCCGAGAAGGGATCAGATATCAACAAAAGGATCGTACTGCAGAACCTTTTGAAATCAGAACCGT
GACTTGTTTACATTCCACTGCCCTATCAATTTCCATCTTCAAAGGTTTAGTTCGATCGATTCTCCATGTTGTTGGCATCCATCTCTCGTCGCCTACATCGTCAGCAGACT
CCATGGAGAATGCTCCTGAATCTGTAGAGTTCCGTCTTAACCCGAATGGAAGTTACATTGAAGAGTTCCGCAGCCGGATCCCAGCAATTCTGTACGACAAAGTTCACAGC
TGCAAATGGCTAGAACAGGACTGCTCAGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTTTTCCACAGAGTGTGCTTGGAGAA
GTGGCTGGACTACTGGAACCTTACATGCCCACTGTGCCGGACTCCATTAATGCCCGAAGAAGAGACAGCTTCCTGCTTCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCTGGATCCCTTGGATTCTTCTGGGAAGTTTTGGATTTGATCCGAGAAGGGATCAGATATCAACAAAAGGATCGTACTGCAGAACCTTTTGAAATCAGAACCGT
GACTTGTTTACATTCCACTGCCCTATCAATTTCCATCTTCAAAGGTTTAGTTCGATCGATTCTCCATGTTGTTGGCATCCATCTCTCGTCGCCTACATCGTCAGCAGACT
CCATGGAGAATGCTCCTGAATCTGTAGAGTTCCGTCTTAACCCGAATGGAAGTTACATTGAAGAGTTCCGCAGCCGGATCCCAGCAATTCTGTACGACAAAGTTCACAGC
TGCAAATGGCTAGAACAGGACTGCTCAGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTTTTCCACAGAGTGTGCTTGGAGAA
GTGGCTGGACTACTGGAACCTTACATGCCCACTGTGCCGGACTCCATTAATGCCCGAAGAAGAGACAGCTTCCTGCTTCTGGTGA
Protein sequenceShow/hide protein sequence
MSSGSLGFFWEVLDLIREGIRYQQKDRTAEPFEIRTVTCLHSTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHS
CKWLEQDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW