; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g04860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g04860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionNuclear cap-binding protein subunit 2
Genome locationchr2:3600983..3604227
RNA-Seq ExpressionMoc02g04860
SyntenyMoc02g04860
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]3.0e-11184.8Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGS+P V+PQYGKHGG HG+G RHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

XP_022140633.1 nuclear cap-binding protein subunit 2 [Momordica charantia]6.5e-12291.6Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
        DDRPIRVDFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD

Query:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
        DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
Subjt:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR

XP_022943536.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita moschata]1.0e-11185.6Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGSVP VIPQYGKHGG HG+G RHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]4.7e-11285.2Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCF LYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGS+P VIPQYGKHGG HG+GHRHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]1.4e-11185.66Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLSVYRDRRF GTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDY-HRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGS+ PV+ QYGKHGG HGHGHRHGRDY HRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDY-HRKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
        DD HAHESSKRTSDYESRRNPDH+SRPEKNPRFRESGDSDEEDDDD+KQRR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR

TrEMBL top hitse value%identityAlignment
A0A1S3CLT9 Nuclear cap-binding protein subunit 27.3e-11184.8Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLSVYRDRRF G+QDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDY-HRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGS+ PV+ QYGKHGG HGHGHRHGRDY HRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDY-HRKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

A0A6J1CIF4 Nuclear cap-binding protein subunit 23.2e-12291.6Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
        DDRPIRVDFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD

Query:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
        DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
Subjt:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR

A0A6J1FX36 Nuclear cap-binding protein subunit 25.1e-11285.6Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGSVP VIPQYGKHGG HG+G RHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

A0A6J1J7C7 Nuclear cap-binding protein subunit 22.3e-11285.2Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCF LYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGS+P VIPQYGKHGG HG+GHRHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

A0A6J1JFW0 Nuclear cap-binding protein subunit 27.3e-11185.2Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCF LYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGG                     QKELEAQRQLVDYGTGSLGS+P VIPQYGKHGG HG+GHRHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

SwissProt top hitse value%identityAlignment
P52298 Nuclear cap-binding protein subunit 26.3e-4362.32Show/hide
Query:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR DAE+A++Y++GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQKELEAQRQLVDYGTGSLGSV
        D GF++GRQ+GRGRSGGQ   +  RQ  D G G  G +
Subjt:  DWGFQDGRQWGRGRSGGQKELEAQRQLVDYGTGSLGSV

Q3ZBJ1 Nuclear cap-binding protein subunit 26.3e-4362.32Show/hide
Query:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR DAE+A++Y++GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQKELEAQRQLVDYGTGSLGSV
        D GF++GRQ+GRGRSGGQ   +  RQ  D G G  G +
Subjt:  DWGFQDGRQWGRGRSGGQKELEAQRQLVDYGTGSLGSV

Q84L14 Nuclear cap-binding protein subunit 21.1e-7966Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLS YRDRRF GTQ+E+E ALQ S+TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKN+KTPCGFCF+LYYSREDAEDAVKY+SGT+L
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
        DDRPIRVDFDWGF++GRQWGRGRSGG                     QKELEAQR+LVDYG     + PP   + G    G+G  +R+ RDY RKRYR+D
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD

Query:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
        +     SS+R  D E +R+       EKNPRFRE GDSDEEDDD  K+RR
Subjt:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR

Q9CQ49 Nuclear cap-binding protein subunit 21.4e-4261.59Show/hide
Query:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR DAE+A++Y++GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQKELEAQRQLVDYGTGSLGSV
        D GF++GRQ+GRGRSGGQ   +  R+  D G G  G +
Subjt:  DWGFQDGRQWGRGRSGGQKELEAQRQLVDYGTGSLGSV

Q9XFD1 Nuclear cap-binding protein subunit 27.6e-8969.14Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFK+  KLS YRDRRF GTQ+EF+ AL+ S TVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKNTKTPCGFCFVL+YSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH
        DDRPIRVDFDWGFQ+GRQWGRGRSGG                     QKELEAQRQLVDYGTGSLG+ P   P  YG   + GG +G G  +RHGR DYH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH

Query:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDD +  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.2e-1037.04Show/hide
Query:  IALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVD
        +A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  T+ P GF F+ + S +DA  A+K + G I+D R I V+
Subjt:  IALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVD

AT5G44200.1 CAP-binding protein 205.4e-9069.14Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFK+  KLS YRDRRF GTQ+EF+ AL+ S TVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKNTKTPCGFCFVL+YSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH
        DDRPIRVDFDWGFQ+GRQWGRGRSGG                     QKELEAQRQLVDYGTGSLG+ P   P  YG   + GG +G G  +RHGR DYH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH

Query:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDD +  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 205.4e-9069.14Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFK+  KLS YRDRRF GTQ+EF+ AL+ S TVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKNTKTPCGFCFVL+YSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH
        DDRPIRVDFDWGFQ+GRQWGRGRSGG                     QKELEAQRQLVDYGTGSLG+ P   P  YG   + GG +G G  +RHGR DYH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGG---------------------QKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH

Query:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDD +  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTTGTTCAAGGACCCGACAAAGCTATCTGTATATCGGGATAGAAGATTTCAGGGAACCCAAGATGAATTTGAAATTGCACTTCAGACTTCAATCACCGTTTA
TGTGGGAAATATGTCCTTTTATACAACAGAAGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATACGAAAACAC
CCTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAAGATGCAGAGGATGCTGTGAAATATATGAGTGGAACAATTCTTGATGATCGTCCTATCCGTGTGGATTTTGAT
TGGGGGTTTCAGGATGGCAGGCAATGGGGTCGTGGTCGAAGTGGTGGTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACCGGTTCACTGGGCTCTGT
GCCGCCAGTGATACCTCAGTATGGAAAACACGGTGGAGGCCATGGACATGGGCATCGGCATGGTAGAGATTACCATCGTAAGCGCTACCGAGATGATGATCACCATGCCC
ATGAAAGCTCTAAGAGAACGTCAGATTATGAATCTAGGAGGAACCCTGATCATGAATCCAGACCGGAGAAGAATCCGAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAA
GATGACGATGACCGAAAGCAGCGGCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGTTGTTCAAGGACCCGACAAAGCTATCTGTATATCGGGATAGAAGATTTCAGGGAACCCAAGATGAATTTGAAATTGCACTTCAGACTTCAATCACCGTTTA
TGTGGGAAATATGTCCTTTTATACAACAGAAGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATACGAAAACAC
CCTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAAGATGCAGAGGATGCTGTGAAATATATGAGTGGAACAATTCTTGATGATCGTCCTATCCGTGTGGATTTTGAT
TGGGGGTTTCAGGATGGCAGGCAATGGGGTCGTGGTCGAAGTGGTGGTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACCGGTTCACTGGGCTCTGT
GCCGCCAGTGATACCTCAGTATGGAAAACACGGTGGAGGCCATGGACATGGGCATCGGCATGGTAGAGATTACCATCGTAAGCGCTACCGAGATGATGATCACCATGCCC
ATGAAAGCTCTAAGAGAACGTCAGATTATGAATCTAGGAGGAACCCTGATCATGAATCCAGACCGGAGAAGAATCCGAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAA
GATGACGATGACCGAAAGCAGCGGCGCTAA
Protein sequenceShow/hide protein sequence
MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDFD
WGFQDGRQWGRGRSGGQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEE
DDDDRKQRR