; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g05690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g05690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionzf-RVT domain-containing protein
Genome locationchr2:4139282..4140016
RNA-Seq ExpressionMoc02g05690
SyntenyMoc02g05690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7804601.1 putative ribonuclease H protein At1g65750 family [Senna tora]4.9e-3533.88Show/hide
Query:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL
        +PTY M     PV +C  +++  R F+WG      + HL++W+ + + K  GGLGL   +  N   + K+ W +I+    LW QVL  KYK        +
Subjt:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL

Query:  SVKQGD--PWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPP
        + K+G     LW  +T  W  +   + W +GNG   KFW DRW+ G     +    S   V +N  +  F   SG W+WS FE  +   V   IAS+ PP
Subjt:  SVKQGD--PWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPP

Query:  EGSSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSVELDMRIWKAI
         G+SN  D P W  S NG +SV   Y  L++   +  D  +WK I
Subjt:  EGSSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSVELDMRIWKAI

KYP50870.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]8.4e-3533.05Show/hide
Query:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL
        +P+Y M    FP  +C +LD+ CR FLWGH   + RIH ++W+ V + K EGGLG+ +FR  NT+ + K  W + ++P  LW Q+L +KY        K+
Subjt:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL

Query:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEG
        + K+    +W  I  AW  +   + W IG+G  +KFW D+W+  +++  +    S+P  E  + + D+I   GN         +   ++  I  + PP G
Subjt:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEG

Query:  SSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSV
          N +D  VW GS++G +++  TY  L + H+V
Subjt:  SSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSV

PKI32035.1 hypothetical protein CRG98_047574 [Punica granatum]4.5e-3636.44Show/hide
Query:  LCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKLSVKQGDPWLWNAITGAWNEIS
        L +N +WGH      +HL+ W ++T+ K  GGLGL +  E+N ALL K+  G + RP  LW +VL+ KY+ R  E   L   Q D WLW AIT AWN+++
Subjt:  LCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKLSVKQGDPWLWNAITGAWNEIS

Query:  QWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEGSSNVSDFPVWL---GSKNGDY
            W +G G  ++FW+D W  G S         IP    NR + +F    G+WNW+AF   ++   LL +ASI+PP    ++   P WL      +G +
Subjt:  QWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEGSSNVSDFPVWL---GSKNGDY

Query:  SVSVTYFHLTSIHSVELDMRIWKAI
        S   TY  L   H++     +W+ I
Subjt:  SVSVTYFHLTSIHSVELDMRIWKAI

PKI77361.1 hypothetical protein CRG98_002306 [Punica granatum]7.9e-4139.71Show/hide
Query:  RFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKLSVKQGDPWL
        + PV +CK +++L R+F+WGH +   +IH +NWN +TR K  GGLGL    +FNT LLGKI WGL+ RP++   +V+    KG   +D  LS +  D  L
Subjt:  RFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKLSVKQGDPWL

Query:  WNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEGSSNVSDFPV
        W AI  AWN+++  + W +G+G   +FW+D+ + G S   +  +G IPE    +P+R F+   GNWNW++    +N S LL IA  +PP       D   
Subjt:  WNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEGSSNVSDFPV

Query:  WLGSKNGDY
        W  S++GD+
Subjt:  WLGSKNGDY

XP_024448418.1 uncharacterized protein LOC112325720 [Populus trichocarpa]1.5e-3632.51Show/hide
Query:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL
        +P Y M +   P   C +++++CR F+WG      +IHL+NWN + R K EGG+GL K +  N A L K+AWG++ + N LW +VL +KY    + +  L
Subjt:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL

Query:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEG
             D  LW AI   W+ ++Q   W +GNG  I FW+D W+    L  +     +    L+  + D + + GNW W  F   I + +++SI    PP  
Subjt:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEG

Query:  SSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSVELDMRIWKAI
           + D   W  S N   +V   Y  L     ++ D+ IW+ I
Subjt:  SSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSVELDMRIWKAI

TrEMBL top hitse value%identityAlignment
A0A2I0HK16 Reverse transcriptase domain-containing protein2.2e-3636.44Show/hide
Query:  LCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKLSVKQGDPWLWNAITGAWNEIS
        L +N +WGH      +HL+ W ++T+ K  GGLGL +  E+N ALL K+  G + RP  LW +VL+ KY+ R  E   L   Q D WLW AIT AWN+++
Subjt:  LCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKLSVKQGDPWLWNAITGAWNEIS

Query:  QWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEGSSNVSDFPVWL---GSKNGDY
            W +G G  ++FW+D W  G S         IP    NR + +F    G+WNW+AF   ++   LL +ASI+PP    ++   P WL      +G +
Subjt:  QWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEGSSNVSDFPVWL---GSKNGDY

Query:  SVSVTYFHLTSIHSVELDMRIWKAI
        S   TY  L   H++     +W+ I
Subjt:  SVSVTYFHLTSIHSVELDMRIWKAI

A0A2I0L9K6 Reverse transcriptase domain-containing protein3.8e-4139.71Show/hide
Query:  RFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKLSVKQGDPWL
        + PV +CK +++L R+F+WGH +   +IH +NWN +TR K  GGLGL    +FNT LLGKI WGL+ RP++   +V+    KG   +D  LS +  D  L
Subjt:  RFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKLSVKQGDPWL

Query:  WNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEGSSNVSDFPV
        W AI  AWN+++  + W +G+G   +FW+D+ + G S   +  +G IPE    +P+R F+   GNWNW++    +N S LL IA  +PP       D   
Subjt:  WNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEGSSNVSDFPV

Query:  WLGSKNGDY
        W  S++GD+
Subjt:  WLGSKNGDY

A0A6N2M5M2 zf-RVT domain-containing protein2.6e-3433.04Show/hide
Query:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL
        +P Y M     P   CK+++++CR F+WG      +IHL+NW I+ + K EGGLGL K    N A + K+AWG++ +   LW + L +KY    + + + 
Subjt:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL

Query:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEG
             D  LW AI   W+ + Q + W +GNG HI FW+D+W+       +L         L+  + D +   GNW W  F   + +  ++SIA   PP  
Subjt:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEG

Query:  SSNVSDFPVWLGSKNGDYSVSVTY
         +  +D   W  S NG  SV   Y
Subjt:  SSNVSDFPVWLGSKNGDYSVSVTY

A0A6N2M5R3 zf-RVT domain-containing protein5.3e-3533.2Show/hide
Query:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL
        +P Y M     P   CK++++LCR F+WG      +IHL+NW  + + K EGG+GL    + N A + K+AWGL+N    LW + L +KY    + D K 
Subjt:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL

Query:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVE-LNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPE
             D  LW AI   W+ + Q   W +G+G  + FW+DRW+       +  V    +VE +N  + D +   GNW W  F   + + VL+ I    PP 
Subjt:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVE-LNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPE

Query:  GSSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSVELDMRIWKAI
           N  D  VW  + NG ++V   Y       ++  D  IWK I
Subjt:  GSSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSVELDMRIWKAI

A0A6N2NH64 Uncharacterized protein7.0e-3531.69Show/hide
Query:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL
        +P Y+M     P   CK+++++CR F+WG  +   +IHL+NW  + + K EGGLG+ K +  N A + K+AWG I + N++W + L  KY    + D   
Subjt:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL

Query:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEG
        +    D  LW  I   W+ + Q   W +GNG  I FW+D W+          +G IP   +N  + D + E G W W  F   I + +++ +A   PP  
Subjt:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEG

Query:  SSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSVELDMRIWKAI
           V+D  +W  S NG +     Y        ++ D  IWK I
Subjt:  SSNVSDFPVWLGSKNGDYSVSVTYFHLTSIHSVELDMRIWKAI

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657505.7e-2630.74Show/hide
Query:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL
        MP ++M     P ++  +LDQL R FLWG      + HL+ W+ V   K EGGLG+   +  N AL+ K+ W L+   N LW  VL  KY      D + 
Subjt:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL

Query:  SVKQGDPW--LWNAIT-GAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKP
         + +G  W   W +I  G  + +S  +GW  G+G  I+FW DRW+ GK L  +L  G  P        +D  +    W+++  +     +  L + ++  
Subjt:  SVKQGDPW--LWNAIT-GAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKP

Query:  PEGSSNVSDFPVWLGSKNGDYSVSVTYFHLT
         +  +   D   W  S++G +SV   Y  LT
Subjt:  PEGSSNVSDFPVWLGSKNGDYSVSVTYFHLT

Arabidopsis top hitse value%identityAlignment
AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.0e-0630.61Show/hide
Query:  KYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWA-----QVLINKYKGRWKEDWKLSVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRW
        K EGGLGL  F E+NT L  K+ W L +    LW        L         + W       D W W  +        +++   IGNG   +FW D W
Subjt:  KYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWA-----QVLINKYKGRWKEDWKLSVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRW

AT4G29090.1 Ribonuclease H-like superfamily protein1.5e-2127.54Show/hide
Query:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL
        +PTY M  F  P  VCK++  +  +F W +      +H   W+ ++  K EGG+G      FN ALLGK  W +++RP  L A+V  ++Y  +  +    
Subjt:  MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKL

Query:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNR-----PLRDFILESG-NWNWSAFEGKINLSVLLSIAS
         +     ++W +I  +   + Q     +GNG  I  W+ +W+  K     L +  +P  E         + D I ESG  W     E          I  
Subjt:  SVKQGDPWLWNAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNR-----PLRDFILESG-NWNWSAFEGKINLSVLLSIAS

Query:  IKPPEGSSNVSDFPVWLGSKNGDYSVSVTYFHLTSI
        ++P  G   + D   W  + +GDY+V   Y+ LT I
Subjt:  IKPPEGSSNVSDFPVWLGSKNGDYSVSVTYFHLTSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACATATAATATGCATATTTTTAGGTTCCCAGTTGCGGTCTGCAAAAAATTAGATCAACTATGTCGGAATTTCCTATGGGGACACGTAAATTCTCACGGAAGGAT
TCACCTAATAAATTGGAATATAGTCACGCGTAGGAAGTATGAGGGAGGTCTAGGTCTTCATAAATTTAGAGAGTTCAATACGGCTCTTTTAGGAAAAATAGCTTGGGGGT
TGATAAATAGGCCAAATGATTTATGGGCACAGGTACTCATTAACAAGTATAAGGGCCGTTGGAAAGAAGATTGGAAACTATCAGTGAAGCAGGGCGATCCTTGGCTTTGG
AACGCCATAACTGGGGCTTGGAATGAAATTAGTCAATGGATGGGATGGGGAATAGGGAATGGTTGTCACATCAAGTTCTGGCAGGATCGCTGGATCTTTGGGAAAAGTCT
TTGTAAGGATCTTGGAGTGGGTAGTATTCCAGAAGTTGAGCTAAATCGACCGCTAAGAGATTTCATTCTAGAATCAGGGAATTGGAATTGGTCTGCCTTTGAAGGCAAAA
TTAATCTGTCGGTGTTGTTATCTATAGCTAGCATTAAACCACCTGAGGGCTCTTCTAATGTCTCTGATTTTCCAGTTTGGTTGGGGTCAAAAAATGGTGATTATTCTGTC
TCGGTTACATACTTCCACCTAACGTCTATTCACTCTGTAGAGCTTGACATGAGAATTTGGAAAGCCATATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTACATATAATATGCATATTTTTAGGTTCCCAGTTGCGGTCTGCAAAAAATTAGATCAACTATGTCGGAATTTCCTATGGGGACACGTAAATTCTCACGGAAGGAT
TCACCTAATAAATTGGAATATAGTCACGCGTAGGAAGTATGAGGGAGGTCTAGGTCTTCATAAATTTAGAGAGTTCAATACGGCTCTTTTAGGAAAAATAGCTTGGGGGT
TGATAAATAGGCCAAATGATTTATGGGCACAGGTACTCATTAACAAGTATAAGGGCCGTTGGAAAGAAGATTGGAAACTATCAGTGAAGCAGGGCGATCCTTGGCTTTGG
AACGCCATAACTGGGGCTTGGAATGAAATTAGTCAATGGATGGGATGGGGAATAGGGAATGGTTGTCACATCAAGTTCTGGCAGGATCGCTGGATCTTTGGGAAAAGTCT
TTGTAAGGATCTTGGAGTGGGTAGTATTCCAGAAGTTGAGCTAAATCGACCGCTAAGAGATTTCATTCTAGAATCAGGGAATTGGAATTGGTCTGCCTTTGAAGGCAAAA
TTAATCTGTCGGTGTTGTTATCTATAGCTAGCATTAAACCACCTGAGGGCTCTTCTAATGTCTCTGATTTTCCAGTTTGGTTGGGGTCAAAAAATGGTGATTATTCTGTC
TCGGTTACATACTTCCACCTAACGTCTATTCACTCTGTAGAGCTTGACATGAGAATTTGGAAAGCCATATCCTAA
Protein sequenceShow/hide protein sequence
MPTYNMHIFRFPVAVCKKLDQLCRNFLWGHVNSHGRIHLINWNIVTRRKYEGGLGLHKFREFNTALLGKIAWGLINRPNDLWAQVLINKYKGRWKEDWKLSVKQGDPWLW
NAITGAWNEISQWMGWGIGNGCHIKFWQDRWIFGKSLCKDLGVGSIPEVELNRPLRDFILESGNWNWSAFEGKINLSVLLSIASIKPPEGSSNVSDFPVWLGSKNGDYSV
SVTYFHLTSIHSVELDMRIWKAIS