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Moc02g06440 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g06440
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRegulator of rDNA transcription protein
Genome locationchr2:4575928..4576692
RNA-Seq ExpressionMoc02g06440
SyntenyMoc02g06440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149635.1 uncharacterized protein LOC111018022 [Momordica charantia]4.4e-81100Show/hide
Query:  KSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLECCATSVVTFSSR
        KSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLECCATSVVTFSSR
Subjt:  KSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLECCATSVVTFSSR

Query:  SQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
        SQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
Subjt:  SQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA

XP_022944661.1 uncharacterized protein LOC111449050 [Cucurbita moschata]3.5e-4664.25Show/hide
Query:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL
        ++RKQN ERL KK +KISLEDYLDFFSS+ QL L V YL QII+MHGY  I   K+V+++AV  I+L+N SRSTL+ES+SSSASI LEDVISDLK+L+W 
Subjt:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL

Query:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
        EC  TSV+ FSS  QN+S  SPD QEPT ASKK  +KLR L ER  Q     DGVSSSCASK    +   QSKRKKTAA
Subjt:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA

XP_022986041.1 uncharacterized protein LOC111483895 [Cucurbita maxima]4.6e-4664.8Show/hide
Query:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL
        + RKQ  ERL KK +KISLEDYLDFFSS+ QL L V YL QII+MHGY  I   K+V++EAV  I+L+N SRSTL+ES+SSSASI LEDVISDLK+L+W 
Subjt:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL

Query:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
        EC  TSV+ FSS  QN+S PSPD QEPT ASKK  +KLR L E   Q   A DGVSSSCASK    +   QSKRKKTAA
Subjt:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA

XP_023512485.1 uncharacterized protein LOC111777222 [Cucurbita pepo subsp. pepo]6.0e-4663.69Show/hide
Query:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL
        ++RKQN ERL KK +KISLEDYLDFFSS+ QL L V YL QII+MHGY  I   K+V+++AV  I+L+N SRSTL+ES+SSSASI LEDVISDLK+L+W 
Subjt:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL

Query:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
        EC  TSV+ FSS +QN+S PSPD +EPT ASKK  +KLR   E   Q   A DGVSSSCASK    +   QSKRKKTAA
Subjt:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA

XP_038902525.1 uncharacterized protein LOC120089183 [Benincasa hispida]6.8e-5066.11Show/hide
Query:  ENRKQNTERL-GKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDW
        ++ KQNTERL  KKK+KISLEDYLDFFSS  Q  L VN+L+QII+MHGY  I   K+VL +AV+ IDLIN SRSTL+ES+SSSA+IPLE VISDL++L+W
Subjt:  ENRKQNTERL-GKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDW

Query:  LECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
         ECC TSV+ F+S  QN+S PSPDHQ+PTCASKKPE+KLR  +E   +   A DGVSSS ASK     L PQSKRKKTAA
Subjt:  LECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA

TrEMBL top hitse value%identityAlignment
A0A5J5A5A0 Uncharacterized protein3.1e-2448.41Show/hide
Query:  KKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKI-NAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLECCATSVVTFS
        +  KISLE+YLDF  ++ Q+ LT+NYL QII MHG+RKI N  K VL +AV+++DLI+PSRSTLE+++SS A I LE+VI DL DL+W EC  TS+ T +
Subjt:  KKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKI-NAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLECCATSVVTFS

Query:  SRSQNSSSPSPDHQEPTCAS-KKPERKLRRL--VERLDQTEAANDGVSSS---CASK
        S   + SS + D  +PT  + K+ +RK+RR   V+ +  +  A  GV  S   C+S+
Subjt:  SRSQNSSSPSPDHQEPTCAS-KKPERKLRRL--VERLDQTEAANDGVSSS---CASK

A0A6A1VCA4 Uncharacterized protein5.0e-2242.86Show/hide
Query:  RKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKI-NAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLE
        R+    ++  K  KISLE+Y++F  S  QL L  ++L QII MHG++K+    K+VL +AV  +DL++PSRSTL ESVSS   + LEDVI+DL  L+W E
Subjt:  RKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKI-NAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLE

Query:  CCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSC--ASK--DLERKLGPQSKRKKTAA
        CC TS+ T  S + + S+P P+   P  +  K   ++              DG SSSC   SK   L RK+G  SKRK+T A
Subjt:  CCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSC--ASK--DLERKLGPQSKRKKTAA

A0A6J1D6A0 uncharacterized protein LOC1110180222.1e-81100Show/hide
Query:  KSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLECCATSVVTFSSR
        KSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLECCATSVVTFSSR
Subjt:  KSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLECCATSVVTFSSR

Query:  SQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
        SQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
Subjt:  SQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA

A0A6J1FV08 uncharacterized protein LOC1114490501.7e-4664.25Show/hide
Query:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL
        ++RKQN ERL KK +KISLEDYLDFFSS+ QL L V YL QII+MHGY  I   K+V+++AV  I+L+N SRSTL+ES+SSSASI LEDVISDLK+L+W 
Subjt:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL

Query:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
        EC  TSV+ FSS  QN+S  SPD QEPT ASKK  +KLR L ER  Q     DGVSSSCASK    +   QSKRKKTAA
Subjt:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA

A0A6J1J9Y9 uncharacterized protein LOC1114838952.2e-4664.8Show/hide
Query:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL
        + RKQ  ERL KK +KISLEDYLDFFSS+ QL L V YL QII+MHGY  I   K+V++EAV  I+L+N SRSTL+ES+SSSASI LEDVISDLK+L+W 
Subjt:  ENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWL

Query:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA
        EC  TSV+ FSS  QN+S PSPD QEPT ASKK  +KLR L E   Q   A DGVSSSCASK    +   QSKRKKTAA
Subjt:  ECCATSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06320.1 unknown protein1.3e-1739.06Show/hide
Query:  KSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKIN-AQKSVLREAVSAIDLINPSRSTLE---ESVSSSASIPLEDVISDLKDLDWLECCATSVVT
        + KI++E+Y++F +S N +  T+ YL QI+ +HG+RK++  QK ++ EAV ++DL++ SRSTL+   +S  SS+S+ L++VISD++ L W ECC TS+  
Subjt:  KSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKIN-AQKSVLREAVSAIDLINPSRSTLE---ESVSSSASIPLEDVISDLKDLDWLECCATSVVT

Query:  FSSRSQNSSSPSPDHQEPTCASKKPERK
         +S+    S  S   Q+     K   +K
Subjt:  FSSRSQNSSSPSPDHQEPTCASKKPERK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACCGAAAACAGAACACAGAAAGGCTGGGGAAGAAGAAAAGTAAGATCTCACTCGAAGACTACCTCGATTTCTTCTCCTCTAACAACCAGCTTCTCCTC
ACCGTCAACTATCTTACTCAGATCATTAAGATGCACGGCTACAGGAAAATCAATGCTCAGAAGAGTGTATTGAGGGAGGCCGTAAGCGCAATTGATCTGATCAAT
CCCTCTCGTTCCACGCTCGAAGAGAGCGTCTCATCCTCCGCGTCCATTCCGCTTGAGGACGTAATTTCGGACCTCAAAGACCTCGATTGGCTAGAATGCTGTGCC
ACGTCGGTTGTTACATTCAGTTCGCGGAGCCAGAATAGCTCCAGTCCGAGTCCGGATCACCAGGAGCCGACTTGTGCCTCAAAGAAGCCGGAAAGAAAACTCCGA
CGATTGGTAGAACGTCTTGATCAAACGGAGGCCGCCAATGATGGAGTTTCCTCGTCTTGTGCCTCAAAGGACCTGGAAAGGAAATTAGGGCCACAGAGTAAGAGA
AAGAAAACAGCAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACCGAAAACAGAACACAGAAAGGCTGGGGAAGAAGAAAAGTAAGATCTCACTCGAAGACTACCTCGATTTCTTCTCCTCTAACAACCAGCTTCTCCTC
ACCGTCAACTATCTTACTCAGATCATTAAGATGCACGGCTACAGGAAAATCAATGCTCAGAAGAGTGTATTGAGGGAGGCCGTAAGCGCAATTGATCTGATCAAT
CCCTCTCGTTCCACGCTCGAAGAGAGCGTCTCATCCTCCGCGTCCATTCCGCTTGAGGACGTAATTTCGGACCTCAAAGACCTCGATTGGCTAGAATGCTGTGCC
ACGTCGGTTGTTACATTCAGTTCGCGGAGCCAGAATAGCTCCAGTCCGAGTCCGGATCACCAGGAGCCGACTTGTGCCTCAAAGAAGCCGGAAAGAAAACTCCGA
CGATTGGTAGAACGTCTTGATCAAACGGAGGCCGCCAATGATGGAGTTTCCTCGTCTTGTGCCTCAAAGGACCTGGAAAGGAAATTAGGGCCACAGAGTAAGAGA
AAGAAAACAGCAGCTTAA
Protein sequenceShow/hide protein sequence
MENRKQNTERLGKKKSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRSTLEESVSSSASIPLEDVISDLKDLDWLECCA
TSVVTFSSRSQNSSSPSPDHQEPTCASKKPERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGPQSKRKKTAA