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Moc02g08080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g08080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionElf4 domain-containing protein
Genome locationchr2:5762186..5762520
RNA-Seq ExpressionMoc02g08080
SyntenyMoc02g08080
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7149256.1 hypothetical protein RHSIM_Rhsim03G0143500 [Rhododendron simsii]1.5e-0467.44Show/hide
Query:  DLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSRDAG
        +LVKNV+LI+EINGNIS+V+S+YSNLSSNF    QH   RD G
Subjt:  DLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSRDAG

KDO66886.1 hypothetical protein CISIN_1g031080mg [Citrus sinensis]2.0e-0463.41Show/hide
Query:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR
        D++ KNV LIREINGNIS+V+SIYS+LS+NFC  +   R R
Subjt:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR

XP_006488523.1 protein ELF4-LIKE 1-like isoform X2 [Citrus sinensis]2.0e-0463.41Show/hide
Query:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR
        D++ KNV LIREINGNIS+V+SIYS+LS+NFC  +   R R
Subjt:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR

XP_015388843.1 uncharacterized protein LOC102621432 isoform X1 [Citrus sinensis]2.0e-0463.41Show/hide
Query:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR
        D++ KNV LIREINGNIS+V+SIYS+LS+NFC  +   R R
Subjt:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR

XP_024035706.1 protein ELF4-LIKE 1 [Citrus clementina]2.0e-0463.41Show/hide
Query:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR
        D++ KNV LIREINGNIS+V+SIYS+LS+NFC  +   R R
Subjt:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR

TrEMBL top hitse value%identityAlignment
A0A067FUK8 Elf4 domain-containing protein9.6e-0563.41Show/hide
Query:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR
        D++ KNV LIREINGNIS+V+SIYS+LS+NFC  +   R R
Subjt:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR

A0A4D9C6S4 Elf4 domain-containing protein1.6e-0457.41Show/hide
Query:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSRDAGGIDKAGNANS
        D+L++NVSLI+EINGNIS+V+S+YS+LSSNF  A  H RS        A N NS
Subjt:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSRDAGGIDKAGNANS

A0A6N2LZC4 Elf4 domain-containing protein2.8e-0445.95Show/hide
Query:  VEQDREREKEVEKCEPESPVDDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSRDAGGIDKAGNANS
        ++++R+  ++V         D+LVKNVSLIREINGNIS+VISIYS+LS NF   +Q  R    GG     N ++
Subjt:  VEQDREREKEVEKCEPESPVDDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSRDAGGIDKAGNANS

A0A7J6WMU0 Early flowering 4-like1.6e-0449.23Show/hide
Query:  VEQDREREKEVEKCEPESPVDDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSRDAGG
        ++Q+R   ++V +       D+L KNV+LI+EINGNIS V+S+YSNLS+NF     H R RD GG
Subjt:  VEQDREREKEVEKCEPESPVDDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSRDAGG

V4SML3 Elf4 domain-containing protein9.6e-0563.41Show/hide
Query:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR
        D++ KNV LIREINGNIS+V+SIYS+LS+NFC  +   R R
Subjt:  DDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACAAACGGCCGAAGTCAGTTGAGCAAGATCGCGAACGAGAAAAAGAAGTCGAGAAATGTGAACCAGAATCACCAGTCGATGATCTGGTCAAGAACGTTTCATT
GATCCGTGAGATTAATGGTAATATCTCTCGCGTCATCTCGATTTACTCCAATTTGTCGTCCAATTTCTGCTACGCAATCCAACACAGTCGTAGTCGTGACGCTGGAGGAA
TTGACAAGGCAGGGAACGCAAATAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACAAACGGCCGAAGTCAGTTGAGCAAGATCGCGAACGAGAAAAAGAAGTCGAGAAATGTGAACCAGAATCACCAGTCGATGATCTGGTCAAGAACGTTTCATT
GATCCGTGAGATTAATGGTAATATCTCTCGCGTCATCTCGATTTACTCCAATTTGTCGTCCAATTTCTGCTACGCAATCCAACACAGTCGTAGTCGTGACGCTGGAGGAA
TTGACAAGGCAGGGAACGCAAATAGCTGA
Protein sequenceShow/hide protein sequence
MKNKRPKSVEQDREREKEVEKCEPESPVDDLVKNVSLIREINGNISRVISIYSNLSSNFCYAIQHSRSRDAGGIDKAGNANS