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Moc02g09390 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g09390
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr2:6649334..6651452
RNA-Seq ExpressionMoc02g09390
SyntenyMoc02g09390
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ00937.1 hypothetical protein Acr_14g0005720 [Actinidia rufa]7.2e-0953.85Show/hide
Query:  SRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY
        S  + + G L PTWEGP+ V  + +PGTY L DL+G  L++PWN EHLK+YY
Subjt:  SRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY

GFZ04453.1 myb domain protein 112 [Actinidia rufa]4.2e-0955.77Show/hide
Query:  SRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY
        S  + +VG L PTWEGP+ V  + +PGTY L DL G  L++PWN EHLK+YY
Subjt:  SRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]4.2e-1763.33Show/hide
Query:  ISLDQANSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYYP
        +  ++   ++Q+HVG LDP+WEGPF VKGI++ GTY+LADL+G+VLA+PWN EHLKRYYP
Subjt:  ISLDQANSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYYP

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]8.5e-1042.11Show/hide
Query:  LAEVRSTGKLGGGRRPPKYSNRF------DVKPIHWISLDQANSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY
        L E RS  +L    R  +Y NR        VK   +   D    +V  HVGAL+P WEGP+ V  I++P  Y+L+DL G  L +PWN EHL+ YY
Subjt:  LAEVRSTGKLGGGRRPPKYSNRF------DVKPIHWISLDQANSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]2.3e-1570.37Show/hide
Query:  NSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYYP
        +S++Q+HVG LDP+WE  F VKGIV+PGTY+LADL+  VLA+PWN EHLKRYYP
Subjt:  NSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A6J1CSJ1 Ribonuclease H2.0e-1763.33Show/hide
Query:  ISLDQANSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYYP
        +  ++   ++Q+HVG LDP+WEGPF VKGI++ GTY+LADL+G+VLA+PWN EHLKRYYP
Subjt:  ISLDQANSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYYP

A0A6J1DWM2 Ribonuclease H4.1e-1042.11Show/hide
Query:  LAEVRSTGKLGGGRRPPKYSNRF------DVKPIHWISLDQANSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY
        L E RS  +L    R  +Y NR        VK   +   D    +V  HVGAL+P WEGP+ V  I++P  Y+L+DL G  L +PWN EHL+ YY
Subjt:  LAEVRSTGKLGGGRRPPKYSNRF------DVKPIHWISLDQANSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY

A0A6J1DXL9 uncharacterized protein LOC1110254481.1e-1570.37Show/hide
Query:  NSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYYP
        +S++Q+HVG LDP+WE  F VKGIV+PGTY+LADL+  VLA+PWN EHLKRYYP
Subjt:  NSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYYP

A0A7J0F238 RNase H domain-containing protein3.5e-0955.77Show/hide
Query:  SRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY
        S  + +VG L PTWEGP+ V  + +PGTY L D  G  L YPWN EHLK+YY
Subjt:  SRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY

A0A7J0G0K9 Ribonuclease H2.0e-0955.77Show/hide
Query:  SRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY
        S  + +VG L PTWEGP+ V  + +PGTY L DL G  L++PWN EHLK+YY
Subjt:  SRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGATCTACTGGGAAGCTCGGTGGGGGCCGACGTCCGCCCAAGTATTCAAATCGGTTTGATGTTAAA
CCGATTCATTGGATTAGTCTCGATCAAGCTAATTCTAGAGTCCAAACCCATGTGGGTGCCCTTGACCCGACCTGGGAGGGGCCGTTTGTGGTCAAGGGAATAGTC
CAACCTGGGACGTACATATTGGCCGATCTGAAAGGAGACGTTCTCGCGTACCCATGGAACGTGGAGCACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGATCTACTGGGAAGCTCGGTGGGGGCCGACGTCCGCCCAAGTATTCAAATCGGTTTGATGTTAAA
CCGATTCATTGGATTAGTCTCGATCAAGCTAATTCTAGAGTCCAAACCCATGTGGGTGCCCTTGACCCGACCTGGGAGGGGCCGTTTGTGGTCAAGGGAATAGTC
CAACCTGGGACGTACATATTGGCCGATCTGAAAGGAGACGTTCTCGCGTACCCATGGAACGTGGAGCACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MLSMRAEVNLAEVRSTGKLGGGRRPPKYSNRFDVKPIHWISLDQANSRVQTHVGALDPTWEGPFVVKGIVQPGTYILADLKGDVLAYPWNVEHLKRYYP