; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g09400 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g09400
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPre-mRNA-splicing factor SYF2
Genome locationchr2:6651504..6655377
RNA-Seq ExpressionMoc02g09400
SyntenyMoc02g09400
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domainsIPR013260 - mRNA splicing factor SYF2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010847.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-15886.38Show/hide
Query:  VTGVRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHD
        V GVR+VV +MS+EGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQQNE V  SSE VQ GRS GS                   SNF PPDEYEDL D
Subjt:  VTGVRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHD

Query:  EKPDIEGHSDGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYM
        EKP+ EGHSDGD DK S   ENVEGDFTKLTGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYM
Subjt:  EKPDIEGHSDGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYM

Query:  LDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRR
        LDTQEAAESKYKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRR
Subjt:  LDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRR

Query:  KFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        KFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  KFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

KAG7027023.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-16088.6Show/hide
Query:  VRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKP
        VRDVV EMS+EGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQQNE V+ SSEAVQ GRS                   S+ SNFAPPDEYEDLHDEKP
Subjt:  VRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKP

Query:  DIEGHSDGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDT
        + EGHSDGD DK S   ENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDT
Subjt:  DIEGHSDGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDT

Query:  QEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFH
        QEAAESKYKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFH
Subjt:  QEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFH

Query:  EDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        EDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  EDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

XP_022146277.1 pre-mRNA-splicing factor syf2 [Momordica charantia]3.1e-182100Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
        MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD

Query:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
        GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Subjt:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK

Query:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
        YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
Subjt:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS

Query:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

XP_023532640.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]1.2e-16088.6Show/hide
Query:  VRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKP
        VRDVV EMS+EGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQQNE V+ SSEAVQ GRS                   S+ SNFAPPDEYEDLHDEKP
Subjt:  VRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKP

Query:  DIEGHSDGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDT
        + EGHSDGD DK S E ENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDT
Subjt:  DIEGHSDGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDT

Query:  QEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFH
        QEAAESKYKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFH
Subjt:  QEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFH

Query:  EDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        EDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  EDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

XP_023532641.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]1.6e-15788.66Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
        MS+EGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQQNE V+ SSEAVQ GRS                   S+ SNFAPPDEYEDLHDEKP+ EGHSD
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD

Query:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
        GD DK S E ENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Subjt:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK

Query:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
        YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDS
Subjt:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS

Query:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ81 Pre-mRNA-splicing factor SYF26.4e-15787.46Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
        MS+EGRVHPDCRNASNPYHECSEYCFK+IAE+KAR+Q+NE V  SSE VQ GRS GS                   S+F PPDEYEDLHDEKPD EGHSD
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD

Query:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
        GD+DK S E ENVEGDFTKLTGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+K
Subjt:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK

Query:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
        YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+RDEKRKSFSRRRKFHEDKDIDS
Subjt:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS

Query:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

A0A6J1CY64 Pre-mRNA-splicing factor SYF21.5e-182100Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
        MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD

Query:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
        GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Subjt:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK

Query:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
        YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
Subjt:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS

Query:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

A0A6J1G6N2 Pre-mRNA-splicing factor SYF23.8e-15788.36Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
        MS+EGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQQNE V+ SSEAVQ GRS                   S+ SNFAPPDEYEDLHDEKP+ EGHSD
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD

Query:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
        GD DK S   ENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Subjt:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK

Query:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
        YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDS
Subjt:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS

Query:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

A0A6J1I290 Pre-mRNA-splicing factor SYF21.2e-15587.46Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
        MS+EGRVHPDCRNASNPYHECSEYCFKIIAEVKA NQ+NE V+ SSEAVQ GRS                   S+  NFAPPDEYEDLHDEKP+ EGHSD
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD

Query:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
        GD DK S   ENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPP+ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Subjt:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK

Query:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
        YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVD+EEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDS
Subjt:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS

Query:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

A0A6J1JD37 Pre-mRNA-splicing factor SYF29.3e-15687.46Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
        MS+EGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQQNE V  SSE VQ GRS GS                   SNF PPDEYEDL DEKP+ EGHSD
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD

Query:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
        GD DK S   ENVEGDFTKLTGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Subjt:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK

Query:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
        YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDS
Subjt:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS

Query:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

SwissProt top hitse value%identityAlignment
Q28G05 Pre-mRNA-splicing factor syf21.1e-2539.27Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   K    E +   S   Y      S+  ID MV +L+++ EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q4QRB2 Pre-mRNA-splicing factor SYF21.4e-2338.6Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPE-FYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + ++   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPE-FYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q6DV01 Pre-mRNA-splicing factor syf23.1e-2336.02Show/hide
Query:  SEENENVEGDFTKLTGRK---KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAE
        SE+  ++  + T    R+   +K  EL LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A G D  +  +L+ + E AE
Subjt:  SEENENVEGDFTKLTGRK---KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAE

Query:  SKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMK-DSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKD
           +K +K     G+  +    +   Y++ T+ +  DLE+Y K++ +S  EFY  ++SL +G      E  +D MV++L+++ +KR+ +SRRR +++D D
Subjt:  SKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMK-DSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKD

Query:  IDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL
        ID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Subjt:  IDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL

Q8AVQ6 Pre-mRNA-splicing factor syf25.1e-2639.27Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   K+   E +   S   Y      S+  ID MV +L+++ EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q9D198 Pre-mRNA-splicing factor SYF21.4e-2338.6Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPE-FYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + ++   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPE-FYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Arabidopsis top hitse value%identityAlignment
AT2G16860.1 GCIP-interacting family protein1.9e-11365.48Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKAR-NQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHS
        M  E RVHPDC NASNPYHEC EYCFK IAE KAR  +QN  ++   E  +                                   E L D++ +     
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKAR-NQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHS

Query:  DGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAES
          + ++  E+N+  + D T+LTGR+KKLFELRLKMNEARK+NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAES
Subjt:  DGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAES

Query:  KYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDID
        KYKKWEK+P P GWDVFNQKTLYNAYKKRTKN+ VDLEEYN+M+ +DPEFYREASSLQYGKAPK S+DKID M KEL +R++KR+ FSRRRKF E+KDID
Subjt:  KYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDID

Query:  SINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        SINDRNEHFNKKIERAFG+YTLEIKNNLERGTALPD
Subjt:  SINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCACCCTGGAGCACCAATGGCTGTCCTCCACGTGTCCAGGGTATTCTTTCCCCAAAACAGTCTTCATTACTCGATCAGTGTTACTGGAGTAAGAGACGTTGTTGA
AGAAATGTCTGAAGAAGGAAGGGTACACCCTGATTGCAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTATTGCTTTAAAATAATTGCTGAAGTCAAAGCCCGGA
ATCAGCAAAATGAGCAAGTTAGTATATCATCAGAAGCTGTTCAAACTGGTCGCAGTGGTGGTTCTTCTGTTCAAGCTCGTTGGAGTAGTGGTTCTTCTGGTCAAGCTGGT
CGAAGTAGTGCTTCCAATTTTGCTCCTCCGGATGAGTACGAAGATCTTCATGATGAAAAGCCCGACATTGAAGGGCACAGTGATGGTGATGTTGACAAATCTAGTGAGGA
GAACGAGAATGTGGAAGGAGACTTCACTAAACTCACGGGGAGGAAGAAAAAGTTGTTTGAACTTAGGCTTAAGATGAATGAGGCGCGGAAAGCTAATCAGACAGCAATTG
CTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAAAAAATTGGGAAGCTTTTAGATGCAAATGGC
TTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTGTTTAATCAGAA
AACGTTGTACAATGCATACAAAAAGCGGACAAAGAATGTAAATGTGGACCTTGAGGAATATAATAAAATGAAAGATTCTGATCCTGAGTTCTACCGCGAGGCTTCGAGTC
TTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTGAAGGAGCGGGATGAGAAGCGTAAGTCATTTAGCCGTAGGAGGAAGTTC
CACGAAGACAAGGATATCGACTCTATCAATGATCGCAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTCGAGCG
AGGAACTGCGTTGCCCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCACCCTGGAGCACCAATGGCTGTCCTCCACGTGTCCAGGGTATTCTTTCCCCAAAACAGTCTTCATTACTCGATCAGTGTTACTGGAGTAAGAGACGTTGTTGA
AGAAATGTCTGAAGAAGGAAGGGTACACCCTGATTGCAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTATTGCTTTAAAATAATTGCTGAAGTCAAAGCCCGGA
ATCAGCAAAATGAGCAAGTTAGTATATCATCAGAAGCTGTTCAAACTGGTCGCAGTGGTGGTTCTTCTGTTCAAGCTCGTTGGAGTAGTGGTTCTTCTGGTCAAGCTGGT
CGAAGTAGTGCTTCCAATTTTGCTCCTCCGGATGAGTACGAAGATCTTCATGATGAAAAGCCCGACATTGAAGGGCACAGTGATGGTGATGTTGACAAATCTAGTGAGGA
GAACGAGAATGTGGAAGGAGACTTCACTAAACTCACGGGGAGGAAGAAAAAGTTGTTTGAACTTAGGCTTAAGATGAATGAGGCGCGGAAAGCTAATCAGACAGCAATTG
CTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAAAAAATTGGGAAGCTTTTAGATGCAAATGGC
TTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTGTTTAATCAGAA
AACGTTGTACAATGCATACAAAAAGCGGACAAAGAATGTAAATGTGGACCTTGAGGAATATAATAAAATGAAAGATTCTGATCCTGAGTTCTACCGCGAGGCTTCGAGTC
TTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTGAAGGAGCGGGATGAGAAGCGTAAGTCATTTAGCCGTAGGAGGAAGTTC
CACGAAGACAAGGATATCGACTCTATCAATGATCGCAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTCGAGCG
AGGAACTGCGTTGCCCGATTAA
Protein sequenceShow/hide protein sequence
MGHPGAPMAVLHVSRVFFPQNSLHYSISVTGVRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQVSISSEAVQTGRSGGSSVQARWSSGSSGQAG
RSSASNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANG
LDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKF
HEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD