CuGenDBv2

Gene ID	Moc02g11280
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	NERD domain-containing protein
Genome location	chr2:8140525..8145531
RNA-Seq Expression	Moc02g11280
Synteny	Moc02g11280
Gene Ontology terms	NA
InterPro domains	IPR011528 - Nuclease-related domain, NERD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148081.1 uncharacterized protein LOC101217532 [Cucumis sativus]

2.9e-139

82.89

Show/hide

Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW  I+GGLIVYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY G AY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLP+PVEETKQLIP+LESYLEQRGV LPAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKE QEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI
        QKLKAIL TAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S S+W+EV +    +++
Subjt:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI

XP_008459170.1 PREDICTED: uncharacterized protein LOC103498367 [Cucumis melo]

1.2e-140

83.56

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Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW  I+GGL+VYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY GKAY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV +PAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKELQEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI
        QKLKAIL TAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S+S+W+EV +    +++
Subjt:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI

XP_022148662.1 uncharacterized protein LOC111017264 [Momordica charantia]

5.5e-162

97.29

Show/hide

Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ
        DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ
Subjt:  DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ

Query:  KLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNMGMQYQVI
        KLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVN+    +++
Subjt:  KLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNMGMQYQVI

XP_022943551.1 uncharacterized protein LOC111448288 [Cucurbita moschata]

5.0e-139

82.89

Show/hide

Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MWV I+GGLIVY +F+LFFSG+DD+MEVETSDFNAIFAVA+RFEKLY GKAYIGLRIPDADTGSR+NIDLVVV +EE+L+ISVKNL GFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV LP GYLSCKVVLPNPKFRTIDSG+FP EV TYDQWMQLKP H  SFSGWMKGAFRGKKELQ+EPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI
        QKLKAIL TAPMWDKLELKGKY+LG+FLEFKGK+EDV+DLR+IKRSK+S +TIQKTSMLGFAPTRLQVLY  RDYRSGG   TS+WKEV +    +++
Subjt:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI

XP_038901981.1 uncharacterized protein LOC120088636 [Benincasa hispida]

7.7e-140

82.89

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Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW  I GGLI+YG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY GKAY+GLRIPDADTGSRQNIDLVV+ +EE+LVI+VKNL GFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPV+ESY+EQRGV LPAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKELQEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI
        QKLKAIL TAPMWDKLELKGKY+LGDFLEFKGK EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S S+W+EV +    +++
Subjt:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTU6 NERD domain-containing protein

1.4e-139

82.89

Show/hide

Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW  I+GGLIVYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY G AY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLP+PVEETKQLIP+LESYLEQRGV LPAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKE QEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI
        QKLKAIL TAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S S+W+EV +    +++
Subjt:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI

A0A1S3CA35 uncharacterized protein LOC103498367

5.7e-141

83.56

Show/hide

Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW  I+GGL+VYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY GKAY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV +PAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKELQEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI
        QKLKAIL TAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S+S+W+EV +    +++
Subjt:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI

A0A5A7SRC0 Plasma membrane isoform 1

5.7e-141

83.56

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Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW  I+GGL+VYG+F+LFF+G+DD+MEVETSDFNAIFAVASRFEKLY GKAY+GLRIPDADTGSRQNIDLVVV +EE+LVISVKNL GFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV +PAGYLSCKVVLPNPKFRTIDSG+FPSEVITYDQWMQLKP H  SFSGWMKGAFRGKKELQEEPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI
        QKLKAIL TAPMWDKLELKGKY+LGDFLEF+GK+EDV+ LR+IKRSK+S +TIQKTSMLGFAPTRLQVLYA RDYRSGG  S+S+W+EV +    +++
Subjt:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI

A0A6J1D5P0 uncharacterized protein LOC111017264

2.7e-162

97.29

Show/hide

Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ
        DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ
Subjt:  DDGHKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQ

Query:  KLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNMGMQYQVI
        KLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVN+    +++
Subjt:  KLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNMGMQYQVI

A0A6J1FS11 uncharacterized protein LOC111448288

2.4e-139

82.89

Show/hide

Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MWV I+GGLIVY +F+LFFSG+DD+MEVETSDFNAIFAVA+RFEKLY GKAYIGLRIPDADTGSR+NIDLVVV +EE+L+ISVKNL GFVSINSDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN
        DDG HK KTLPDPVEETKQLIPVLESYLEQRGV LP GYLSCKVVLPNPKFRTIDSG+FP EV TYDQWMQLKP H  SFSGWMKGAFRGKKELQ+EPL+
Subjt:  DDG-HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLN

Query:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI
        QKLKAIL TAPMWDKLELKGKY+LG+FLEFKGK+EDV+DLR+IKRSK+S +TIQKTSMLGFAPTRLQVLY  RDYRSGG   TS+WKEV +    +++
Subjt:  QKLKAILSTAPMWDKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGG--STSDWKEVNMGMQYQVI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

2.3e-94

60.2

Show/hide

Query:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC
        MW+ I+ GL++Y + R FF  +D+  +VETSD  A+F+VA R EKLY GKAY+GLRIPDADT SRQ+ID+V+V + +V+VISVKNL G V++ SDGSWVC
Subjt:  MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVC

Query:  DDG--HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPL
        + G  H T+T PDP+ E K+   VLESYLEQRGV L  G +SCKVV+PNP FRTI +  FPSEVITY+ W QLKP  K   SGW+KGAF   KE+QE   
Subjt:  DDG--HKTKTLPDPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPL

Query:  NQKLKAILSTAPMWDKLELK-GKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGST-SDWKEVNMGMQYQVI
        +QKL  IL TAP WD++ELK  K VLG+FLEFKGK ED   LR IKRSKV +++IQKTSM G AP+RLQVLY+ RDYRS GS+ ++ KEV +    +V+
Subjt:  NQKLKAILSTAPMWDKLELK-GKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGST-SDWKEVNMGMQYQVI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGGTTACAATTCTTGGTGGACTCATCGTTTATGGCATCTTCAGGCTCTTCTTCTCCGGCGAAGACGATATTATGGAGGTCGAGACCTCCGATTTCAATGCTATTTT
CGCCGTCGCTAGTAGGTTTGAGAAGCTCTACAGTGGAAAGGCTTACATCGGGCTTCGGATTCCTGATGCCGACACCGGTTCCCGGCAGAATATTGATCTCGTAGTTGTTA
ACGAAGAGGAGGTATTGGTGATATCTGTCAAGAACTTAAAAGGATTTGTCTCCATCAATTCGGATGGTTCCTGGGTTTGTGACGACGGACACAAGACAAAGACTCTTCCT
GATCCTGTTGAAGAGACCAAACAATTGATACCTGTTCTTGAGTCTTACCTTGAACAAAGAGGAGTGGGTCTTCCAGCGGGGTATTTGTCATGCAAAGTTGTACTTCCAAA
TCCAAAATTCCGCACAATTGACTCGGGCATATTTCCTTCTGAGGTTATTACCTATGACCAGTGGATGCAGCTGAAACCGGAACACAAAGGTTCCTTTTCTGGGTGGATGA
AAGGTGCATTTCGTGGAAAGAAAGAGTTGCAGGAAGAACCTCTGAATCAGAAGCTTAAAGCTATCCTTAGCACCGCACCAATGTGGGATAAATTGGAGCTCAAAGGGAAA
TATGTATTAGGAGACTTTCTGGAATTCAAGGGTAAGGACGAAGATGTGGAGGATTTGAGAGAGATCAAACGATCAAAAGTTAGTCAGATGACTATTCAGAAGACTAGCAT
GCTTGGATTTGCTCCTACAAGGCTTCAAGTACTGTATGCTTCCCGCGATTATCGAAGTGGGGGCTCAACATCAGATTGGAAGGAAGTGAATATGGGCATGCAGTATCAGG
TCATCTCGGCATGCAGTATCAGGTCATCTGCTTATTATATCTATGTATCTCCACAATGGGTTTCTGCTCTACTGAAGTTGGGTATCACCAATAGTTTCAAGGATAGCTTA
TGCTTCTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MWVTILGGLIVYGIFRLFFSGEDDIMEVETSDFNAIFAVASRFEKLYSGKAYIGLRIPDADTGSRQNIDLVVVNEEEVLVISVKNLKGFVSINSDGSWVCDDGHKTKTLP
DPVEETKQLIPVLESYLEQRGVGLPAGYLSCKVVLPNPKFRTIDSGIFPSEVITYDQWMQLKPEHKGSFSGWMKGAFRGKKELQEEPLNQKLKAILSTAPMWDKLELKGK
YVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASRDYRSGGSTSDWKEVNMGMQYQVISACSIRSSAYYIYVSPQWVSALLKLGITNSFKDSL
CF

Moc02g11280 (gene) of Bitter gourd (OHB3-1) v2 genome