; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g12460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g12460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr2:9047645..9054403
RNA-Seq ExpressionMoc02g12460
SyntenyMoc02g12460
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156048.1 uncharacterized protein LOC111023016 [Momordica charantia]1.1e-1784.75Show/hide
Query:  GEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLGS
        GEPV GL KATDLSGE RPSPGHRLNSTTLDRG  AEEVESVPLT E++RVNIGTKLG+
Subjt:  GEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLGS

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]6.0e-6496.18Show/hide
Query:  MNPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNST
        MNPDESHRCFE KSLK+AADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKG PVAGLIKATDLSG+ RPSPGHRLNST
Subjt:  MNPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNST

Query:  TLDRGEPAEEVESVPLTAEDRRVNIGTKLGS
        TLDRGEPAEEVESVPLTAEDRRVNIGTKLGS
Subjt:  TLDRGEPAEEVESVPLTAEDRRVNIGTKLGS

XP_022158042.1 uncharacterized protein LOC111024621 [Momordica charantia]2.3e-1542.96Show/hide
Query:  NPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTT
        NP E  +CFE +SL+ AA+ L E  PSPD Q NPTT D GEPV G+                           P+    +A D  GE+  SP    + T 
Subjt:  NPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTT

Query:  LDRGEPAEEVESVPLTAEDRRVNIGTKLGSTSPGS
         DRGEP +EVES+PLT++DRRVNIGT+LG+    S
Subjt:  LDRGEPAEEVESVPLTAEDRRVNIGTKLGSTSPGS

TrEMBL top hitse value%identityAlignment
A0A6J1DPJ5 uncharacterized protein LOC1110230165.4e-1884.75Show/hide
Query:  GEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLGS
        GEPV GL KATDLSGE RPSPGHRLNSTTLDRG  AEEVESVPLT E++RVNIGTKLG+
Subjt:  GEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLGS

A0A6J1DVC6 Ribonuclease H2.9e-6496.18Show/hide
Query:  MNPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNST
        MNPDESHRCFE KSLK+AADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKG PVAGLIKATDLSG+ RPSPGHRLNST
Subjt:  MNPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNST

Query:  TLDRGEPAEEVESVPLTAEDRRVNIGTKLGS
        TLDRGEPAEEVESVPLTAEDRRVNIGTKLGS
Subjt:  TLDRGEPAEEVESVPLTAEDRRVNIGTKLGS

A0A6J1DW49 uncharacterized protein LOC1110246211.1e-1542.96Show/hide
Query:  NPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTT
        NP E  +CFE +SL+ AA+ L E  PSPD Q NPTT D GEPV G+                           P+    +A D  GE+  SP    + T 
Subjt:  NPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTT

Query:  LDRGEPAEEVESVPLTAEDRRVNIGTKLGSTSPGS
         DRGEP +EVES+PLT++DRRVNIGT+LG+    S
Subjt:  LDRGEPAEEVESVPLTAEDRRVNIGTKLGSTSPGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAGCGAAGAGCCTGAAAGAAGCGGCTGATCACTTAGATGAGGCAAGACCGAGCCCTGATCGTCAACTTAATCCG
ACCACCCTTGACGGGGGAGAACCAGTGTCGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCGAGGCCGAGCCCTGGTTATCGACTTAATCCGACCACCCTT
GATAAGGGAGAACCAGTGGCGGGCCTGATTAAAGCGACAGATCTTTCGGGAGAGGTAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGA
GAACCGGCTGAAGAGGTAGAATCTGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATTGGAACCAAGTTGGGGAGTACTAGTCCCGGATCAACAAGTTTGGTG
GATGCGAGCTATGAAGCAAGAAAGTTCTCCATGGCTGAGGTGAGCTTTATGATCGAGCTAGCTCTTATAGTTGAGCTTGGATATGGTCAACTCAAAAGTTCGGAG
GTGATGACCTTCCTTCATGATAGCTCATCCTTTAGGCTTACGCGAGCTCTCTCATGGGAGCTTGCGTTTAGGTTGAGGGTTACACTAACTCTCTCATGGGAGCTA
CATTTACGCCAAGGTGAGTTTCGTCTAGATAGCTCATCCTTTAGGCTTATGCGAGCTCTCTCATGGGGCTTGCATTTAGGTCGAGGCGAGCTTTATTGTGATACC
TCATCCTTTAGGCTTATGCTAGCTCTCTCATGGGAGCTTGCGGTTAGGTCGAGGGAGGTCATTATTGAGGTCGAGGTGAGCTACCTGATAGCTATCAAGTGGGAG
CTCATCCTTGATGTTCAAGATGAGCTATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAGCGAAGAGCCTGAAAGAAGCGGCTGATCACTTAGATGAGGCAAGACCGAGCCCTGATCGTCAACTTAATCCG
ACCACCCTTGACGGGGGAGAACCAGTGTCGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCGAGGCCGAGCCCTGGTTATCGACTTAATCCGACCACCCTT
GATAAGGGAGAACCAGTGGCGGGCCTGATTAAAGCGACAGATCTTTCGGGAGAGGTAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGA
GAACCGGCTGAAGAGGTAGAATCTGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATTGGAACCAAGTTGGGGAGTACTAGTCCCGGATCAACAAGTTTGGTG
GATGCGAGCTATGAAGCAAGAAAGTTCTCCATGGCTGAGGTGAGCTTTATGATCGAGCTAGCTCTTATAGTTGAGCTTGGATATGGTCAACTCAAAAGTTCGGAG
GTGATGACCTTCCTTCATGATAGCTCATCCTTTAGGCTTACGCGAGCTCTCTCATGGGAGCTTGCGTTTAGGTTGAGGGTTACACTAACTCTCTCATGGGAGCTA
CATTTACGCCAAGGTGAGTTTCGTCTAGATAGCTCATCCTTTAGGCTTATGCGAGCTCTCTCATGGGGCTTGCATTTAGGTCGAGGCGAGCTTTATTGTGATACC
TCATCCTTTAGGCTTATGCTAGCTCTCTCATGGGAGCTTGCGGTTAGGTCGAGGGAGGTCATTATTGAGGTCGAGGTGAGCTACCTGATAGCTATCAAGTGGGAG
CTCATCCTTGATGTTCAAGATGAGCTATTATGA
Protein sequenceShow/hide protein sequence
MNPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRG
EPAEEVESVPLTAEDRRVNIGTKLGSTSPGSTSLVDASYEARKFSMAEVSFMIELALIVELGYGQLKSSEVMTFLHDSSSFRLTRALSWELAFRLRVTLTLSWEL
HLRQGEFRLDSSSFRLMRALSWGLHLGRGELYCDTSSFRLMLALSWELAVRSREVIIEVEVSYLIAIKWELILDVQDELL