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Moc02g12940 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g12940
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionVQ motif-containing protein 29
Genome locationchr2:9435501..9440679
RNA-Seq ExpressionMoc02g12940
SyntenyMoc02g12940
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008889 - VQ
IPR039610 - VQ motif-containing protein 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY50094.1 hypothetical protein CUMW_124080 [Citrus unshiu]2.0e-1455.96Show/hide
Query:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQ-GYPPAPPPPQYI--QPQPHPNQQTGFLEGC------SLLLLSLGCLLLRRKDGTLTYDSNF---
        MSYY+ +QPPVGAPP  PQG PPKDAYPP GYPVQ GY    PPPQY     QP P Q+TGFLEGC      SLLLL  GCLL       LT++  F   
Subjt:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQ-GYPPAPPPPQYI--QPQPHPNQQTGFLEGC------SLLLLSLGCLLLRRKDGTLTYDSNF---

Query:  IVVGCSGVL
         +V CS ++
Subjt:  IVVGCSGVL

KAA0045761.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]1.4e-1555.88Show/hide
Query:  PHSSS------SSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGE---GAVIYYGYPGVGFSE
        PHS S       +   K   +AVAP  PTPPQ+YKV+P++FRDVVQKLTAAPEFQDRRLQAMP PRP+    S    D SGE   G V Y+G+     SE
Subjt:  PHSSS------SSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGE---GAVIYYGYPGVGFSE

Query:  RY
        RY
Subjt:  RY

MBA0590607.1 hypothetical protein [Gossypium raimondii]1.1e-1767.86Show/hide
Query:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQY---IQPQPHPNQQTGFLEGCSLLLLSLGCLLLRRKDGT
        MSYY+  QPPVG PP  PQG PPKDAYPP GYP +GY   PPPPQY     P P   Q+TGFLEGC+LLLLS GCLLLRRK  T
Subjt:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQY---IQPQPHPNQQTGFLEGCSLLLLSLGCLLLRRKDGT

XP_022149526.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Momordica charantia]1.8e-2891.89Show/hide
Query:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLL
        MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFLEGC L  L   CLL
Subjt:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLL

XP_022149539.1 VQ motif-containing protein 29 [Momordica charantia]9.6e-46100Show/hide
Query:  PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY
        PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY
Subjt:  PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY

TrEMBL top hitse value%identityAlignment
A0A5A7TW54 VQ motif-containing protein 296.6e-1655.88Show/hide
Query:  PHSSS------SSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGE---GAVIYYGYPGVGFSE
        PHS S       +   K   +AVAP  PTPPQ+YKV+P++FRDVVQKLTAAPEFQDRRLQAMP PRP+    S    D SGE   G V Y+G+     SE
Subjt:  PHSSS------SSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGE---GAVIYYGYPGVGFSE

Query:  RY
        RY
Subjt:  RY

A0A6J1D7B4 VQ motif-containing protein 294.7e-46100Show/hide
Query:  PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY
        PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY
Subjt:  PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY

A0A6J1D8M7 cysteine-rich and transmembrane domain-containing protein WIH1-like8.8e-2991.89Show/hide
Query:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLL
        MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFLEGC L  L   CLL
Subjt:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLL

A0A7J8PMY2 Uncharacterized protein5.4e-1867.86Show/hide
Query:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQY---IQPQPHPNQQTGFLEGCSLLLLSLGCLLLRRKDGT
        MSYY+  QPPVG PP  PQG PPKDAYPP GYP +GY   PPPPQY     P P   Q+TGFLEGC+LLLLS GCLLLRRK  T
Subjt:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQY---IQPQPHPNQQTGFLEGCSLLLLSLGCLLLRRKDGT

A0A7J9C124 Uncharacterized protein5.4e-1867.86Show/hide
Query:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQY---IQPQPHPNQQTGFLEGCSLLLLSLGCLLLRRKDGT
        MSYY+  QPPVG PP  PQG PPKDAYPP GYP +GY   PPPPQY     P P   Q+TGFLEGC+LLLLS GCLLLRRK  T
Subjt:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQY---IQPQPHPNQQTGFLEGCSLLLLSLGCLLLRRKDGT

SwissProt top hitse value%identityAlignment
P24603 Rhodopsin1.9e-0457.14Show/hide
Query:  SYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAP--PPPQYIQPQPHPNQ
        +Y     PP G PPP PQG PP+  YPP GYP QGYPP P  PPPQ   PQ  P Q
Subjt:  SYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAP--PPPQYIQPQPHPNQ

Q17094 Rhodopsin (Fragment)1.9e-0457.14Show/hide
Query:  SYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAP--PPPQYIQPQPHPNQ
        +Y     PP G PPP PQG PP+  YPP GYP QGYPP P  PPPQ   PQ  P Q
Subjt:  SYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAP--PPPQYIQPQPHPNQ

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH29.2e-0747.83Show/hide
Query:  HHQPPVGAPPPQ--PQGSPPKDAYPPVGYPVQGYP-------------------PAPPPPQYIQPQPHPNQQT--GFLEGCSLLLLSLGCLL
        ++QPPVG PPPQ  P    PKDAYPP GYP QGYP                   P P  PQY  P  H  QQ+  GFLEGC L  L   CLL
Subjt:  HHQPPVGAPPPQ--PQGSPPKDAYPPVGYPVQGYP-------------------PAPPPPQYIQPQPHPNQQT--GFLEGCSLLLLSLGCLL

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH14.9e-0853.09Show/hide
Query:  YDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPP----------APPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLL
        Y   Q PVGAPP  PQG PPKD YPP GYP  GYPP            PPPQY Q  P   Q  G LEGC L  L   CLL
Subjt:  YDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPP----------APPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLL

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein6.5e-0847.83Show/hide
Query:  HHQPPVGAPPPQ--PQGSPPKDAYPPVGYPVQGYP-------------------PAPPPPQYIQPQPHPNQQT--GFLEGCSLLLLSLGCLL
        ++QPPVG PPPQ  P    PKDAYPP GYP QGYP                   P P  PQY  P  H  QQ+  GFLEGC L  L   CLL
Subjt:  HHQPPVGAPPPQ--PQGSPPKDAYPPVGYPVQGYP-------------------PAPPPPQYIQPQPHPNQQT--GFLEGCSLLLLSLGCLL

AT3G49845.1 unknown protein2.0e-0453.73Show/hide
Query:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAP-PPPQYIQ----PQPHPNQQTGFLEG
        MSY D  Q PV APP  PQG PPK+ YPP GYP    PPA  PPPQY Q    P  +P  Q G+ +G
Subjt:  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAP-PPPQYIQ----PQPHPNQQTGFLEG

AT5G67600.1 unknown protein3.5e-0953.09Show/hide
Query:  YDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPP----------APPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLL
        Y   Q PVGAPP  PQG PPKD YPP GYP  GYPP            PPPQY Q  P   Q  G LEGC L  L   CLL
Subjt:  YDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPP----------APPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTACGACCACCACCAGCCGCCGGTTGGGGCTCCGCCACCGCAACCGCAAGGGTCCCCTCCAAAGGATGCTTATCCTCCGGTAGGGTATCCTGTTCAG
GGCTACCCTCCGGCGCCGCCGCCTCCACAGTACATTCAGCCTCAGCCTCATCCCAACCAACAAACCGGTTTCCTTGAAGGATGCTCTTTGTTGCTGTTGTCTCTT
GGATGCTTGCTTCTGAGAAGAAAGGATGGAACTTTAACTTATGATTCTAATTTCATTGTTGTAGGGTGTAGCGGTGTCCTTTGCAATCCTCTAGGGGGTGTCAGG
ATTCGGGTACAGGGTGCTAATACTTCCTTCGTTGATTGGTTCTCTTACAAAATGTTTGGTACGCTCGACCTGCCTCACTCCTCTTCTTCTTCGCCGGCGGTCAAG
CCATGGAACAGGGCCGTGGCGCCGCTGCCGCCGACTCCGCCGCAGATTTACAAGGTGAACCCCGTCGACTTTCGGGACGTGGTCCAGAAGCTAACTGCGGCGCCC
GAGTTCCAGGACCGCCGCCTCCAAGCCATGCCTGCCCCCCGCCCCAGCCCGCCCCCCGGTTCCGCCGCTTGCACGGATTTTTCCGGCGAGGGGGCTGTTATTTAC
TATGGGTATCCTGGAGTTGGATTCTCTGAAAGATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATTACGACCACCACCAGCCGCCGGTTGGGGCTCCGCCACCGCAACCGCAAGGGTCCCCTCCAAAGGATGCTTATCCTCCGGTAGGGTATCCTGTTCAG
GGCTACCCTCCGGCGCCGCCGCCTCCACAGTACATTCAGCCTCAGCCTCATCCCAACCAACAAACCGGTTTCCTTGAAGGATGCTCTTTGTTGCTGTTGTCTCTT
GGATGCTTGCTTCTGAGAAGAAAGGATGGAACTTTAACTTATGATTCTAATTTCATTGTTGTAGGGTGTAGCGGTGTCCTTTGCAATCCTCTAGGGGGTGTCAGG
ATTCGGGTACAGGGTGCTAATACTTCCTTCGTTGATTGGTTCTCTTACAAAATGTTTGGTACGCTCGACCTGCCTCACTCCTCTTCTTCTTCGCCGGCGGTCAAG
CCATGGAACAGGGCCGTGGCGCCGCTGCCGCCGACTCCGCCGCAGATTTACAAGGTGAACCCCGTCGACTTTCGGGACGTGGTCCAGAAGCTAACTGCGGCGCCC
GAGTTCCAGGACCGCCGCCTCCAAGCCATGCCTGCCCCCCGCCCCAGCCCGCCCCCCGGTTCCGCCGCTTGCACGGATTTTTCCGGCGAGGGGGCTGTTATTTAC
TATGGGTATCCTGGAGTTGGATTCTCTGAAAGATATTAG
Protein sequenceShow/hide protein sequence
MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLLLRRKDGTLTYDSNFIVVGCSGVLCNPLGGVR
IRVQGANTSFVDWFSYKMFGTLDLPHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGEGAVIY
YGYPGVGFSERY