; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc02g13080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g13080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCLK4-associating serine/arginine rich protein
Genome locationchr2:9542688..9543878
RNA-Seq ExpressionMoc02g13080
SyntenyMoc02g13080
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019147 - Suppressor of white apricot, N-terminal domain
IPR040397 - Suppressor of white apricot


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035202.1 CLK4-associating serine/arginine rich protein [Cucurbita argyrosperma subsp. argyrosperma]3.2e-6298.44Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQ
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        EKSEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

XP_022149495.1 CLK4-associating serine/arginine rich protein [Momordica charantia]1.0e-63100Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK

Query:  SEEEEELEEFVNFQRYRDLIKHRRRG
        SEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  SEEEEELEEFVNFQRYRDLIKHRRRG

XP_022947250.1 CLK4-associating serine/arginine rich protein isoform X1 [Cucurbita moschata]3.2e-6298.44Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQ
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        EKSEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

XP_023006935.1 CLK4-associating serine/arginine rich protein isoform X1 [Cucurbita maxima]3.2e-6298.44Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQ
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        EKSEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

XP_023521265.1 CLK4-associating serine/arginine rich protein-like [Cucurbita pepo subsp. pepo]3.2e-6298.44Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQ
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        EKSEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

TrEMBL top hitse value%identityAlignment
A0A6J1D5W2 CLK4-associating serine/arginine rich protein4.9e-64100Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK

Query:  SEEEEELEEFVNFQRYRDLIKHRRRG
        SEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  SEEEEELEEFVNFQRYRDLIKHRRRG

A0A6J1G5W5 CLK4-associating serine/arginine rich protein isoform X21.6e-6298.44Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQ
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        EKSEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

A0A6J1G6C5 CLK4-associating serine/arginine rich protein isoform X11.6e-6298.44Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQ
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        EKSEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

A0A6J1KZ57 CLK4-associating serine/arginine rich protein isoform X21.6e-6298.44Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQ
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        EKSEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

A0A6J1L1K6 CLK4-associating serine/arginine rich protein isoform X11.6e-6298.44Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ
        MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP  RHIRTQ
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREP--RHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        EKSEEEEELEEFVNFQRYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

SwissProt top hitse value%identityAlignment
A0JNI5 CLK4-associating serine/arginine rich protein4.3e-1740.98Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK
        MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A +    ++PW G  + MIDRFD RA LD I +         
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK

Query:  SEEEEELEEFVNFQRYRDLIKH
        S E+E  E   N++RYR L+++
Subjt:  SEEEEELEEFVNFQRYRDLIKH

Q12872 Splicing factor, suppressor of white-apricot homolog1.3e-0533Show/hide
Query:  GDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE-----PRHIRTQEKSEEEEELEEFVNFQRY----RDLIKHRRR
        G  +  + V G  C+++RDD    A +  Q LIPW G   ++IDR+DGR  L  + E         R  + SEEE  +E   + +RY     DL++   R
Subjt:  GDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE-----PRHIRTQEKSEEEEELEEFVNFQRY----RDLIKHRRR

Q5HZB6 CLK4-associating serine/arginine rich protein4.3e-1740.98Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK
        MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A +    ++PW G  + MIDRFD RA LD I +         
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK

Query:  SEEEEELEEFVNFQRYRDLIKH
        S E+E  E   N++RYR L+++
Subjt:  SEEEEELEEFVNFQRYRDLIKH

Q8CFC7 CLK4-associating serine/arginine rich protein4.3e-1740.98Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK
        MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A +    ++PW G  + MIDRFD RA LD I +         
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK

Query:  SEEEEELEEFVNFQRYRDLIKH
        S E+E  E   N++RYR L+++
Subjt:  SEEEEELEEFVNFQRYRDLIKH

Q8N2M8 CLK4-associating serine/arginine rich protein4.3e-1740.98Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK
        MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A +    ++PW G  + MIDRFD RA LD I +         
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEK

Query:  SEEEEELEEFVNFQRYRDLIKH
        S E+E  E   N++RYR L+++
Subjt:  SEEEEELEEFVNFQRYRDLIKH

Arabidopsis top hitse value%identityAlignment
AT4G36980.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479 proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source: NCBI BLink).7.5e-5784.38Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQ
        MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT+DQQGLIPWNGKQDVMIDRFDGRALLDF+RE   R +R  
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        +K+EEEEELEEFVNF+RYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

AT4G36980.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 5391 Blast hits to 4388 proteins in 280 species: Archae - 1; Bacteria - 114; Metazoa - 3014; Fungi - 666; Plants - 308; Viruses - 14; Other Eukaryotes - 1274 (source: NCBI BLink).7.5e-5784.38Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQ
        MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT+DQQGLIPWNGKQDVMIDRFDGRALLDF+RE   R +R  
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        +K+EEEEELEEFVNF+RYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

AT4G36980.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147).7.5e-5784.38Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQ
        MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT+DQQGLIPWNGKQDVMIDRFDGRALLDF+RE   R +R  
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        +K+EEEEELEEFVNF+RYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG

AT4G36980.4 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147).7.5e-5784.38Show/hide
Query:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQ
        MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT+DQQGLIPWNGKQDVMIDRFDGRALLDF+RE   R +R  
Subjt:  MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIRE--PRHIRTQ

Query:  EKSEEEEELEEFVNFQRYRDLIKHRRRG
        +K+EEEEELEEFVNF+RYRDLIKHRRRG
Subjt:  EKSEEEEELEEFVNFQRYRDLIKHRRRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCACGAGGCGAGGAGATCCGAGAGGAAGGTCCACGACATGATGGACGCTGCTCGAAAGCGAGCTCAAAGGCGCGCCGTCTTCCTCGCCAAGCGCCGTGGCGATCC
TCAGCAATCCATCCAGGTCGTCGGAACTCGCTGCCGCGTTTACCGTGACGATGGTCTCTATCAAGCAACTCAGGACCAACAAGGCCTGATTCCTTGGAATGGTAAGCAGG
ATGTAATGATTGACAGATTTGATGGACGTGCCCTGCTTGATTTCATTCGAGAACCCCGACATATTCGAACACAAGAAAAATCGGAGGAAGAAGAGGAATTAGAAGAGTTT
GTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGACGTCGAGGATGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCACGAGGCGAGGAGATCCGAGAGGAAGGTCCACGACATGATGGACGCTGCTCGAAAGCGAGCTCAAAGGCGCGCCGTCTTCCTCGCCAAGCGCCGTGGCGATCC
TCAGCAATCCATCCAGGTCGTCGGAACTCGCTGCCGCGTTTACCGTGACGATGGTCTCTATCAAGCAACTCAGGACCAACAAGGCCTGATTCCTTGGAATGGTAAGCAGG
ATGTAATGATTGACAGATTTGATGGACGTGCCCTGCTTGATTTCATTCGAGAACCCCGACATATTCGAACACAAGAAAAATCGGAGGAAGAAGAGGAATTAGAAGAGTTT
GTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGACGTCGAGGATGTGGTTAA
Protein sequenceShow/hide protein sequence
MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATQDQQGLIPWNGKQDVMIDRFDGRALLDFIREPRHIRTQEKSEEEEELEEF
VNFQRYRDLIKHRRRGCG