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Moc02g14060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc02g14060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr2:10374460..10375703
RNA-Seq ExpressionMoc02g14060
SyntenyMoc02g14060
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]2.4e-2761.54Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEV-QTHVGALDPAWEGPFEIKGIVRPGTYVLADL
        MEIGAPE SWMDPIADFIRG+SPQDPKERRKLARRAARFVVR  ALYRRGFSLPLLRCLTPEEGLY + + H G              ++R G Y    L
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEV-QTHVGALDPAWEGPFEIKGIVRPGTYVLADL

Query:  KGDVLAHPWNAEHLKRY
          DV       ++ +RY
Subjt:  KGDVLAHPWNAEHLKRY

XP_022142324.1 uncharacterized protein LOC111012466 [Momordica charantia]5.3e-2758.62Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEVQTHVGALDPAWEGPFEIKGIVRPGTYVLADLK
        MEIGAPE SWMDPIADFIRG+SPQDP E RKLARRAARFVVR GALYRRGFSLPLLRCLTP+EGLY ++     +     G   +   V P  Y    L 
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEVQTHVGALDPAWEGPFEIKGIVRPGTYVLADLK

Query:  GDVLAHPWNAEHLKRY
         D        ++ +RY
Subjt:  GDVLAHPWNAEHLKRY

XP_022143486.1 uncharacterized protein LOC111013362 [Momordica charantia]6.3e-2896.97Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLY
        MEIGAPE SWMDPIADFIRG+SPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLY
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLY

XP_022158219.1 protein NYNRIN-like [Momordica charantia]7.0e-2786.49Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEV-QTHVG
        MEIGAPE SWMDPIADFIRG+SPQDPKERRKLA R ARFVVRDGALYRRGFSLPLLRCLTPEEGLY + + H G
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEV-QTHVG

XP_022158520.1 uncharacterized protein LOC111024991 [Momordica charantia]2.0e-2678.95Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEVQTHVGALD
        MEIGAPE SWM+PI DFI+G+SPQDPKERRKLARRAARFV+RDGALYRRGFSLPLL+CLTPEEGL + +  V   D
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEVQTHVGALD

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H1.2e-2761.54Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEV-QTHVGALDPAWEGPFEIKGIVRPGTYVLADL
        MEIGAPE SWMDPIADFIRG+SPQDPKERRKLARRAARFVVR  ALYRRGFSLPLLRCLTPEEGLY + + H G              ++R G Y    L
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEV-QTHVGALDPAWEGPFEIKGIVRPGTYVLADL

Query:  KGDVLAHPWNAEHLKRY
          DV       ++ +RY
Subjt:  KGDVLAHPWNAEHLKRY

A0A6J1CL97 uncharacterized protein LOC1110124662.6e-2758.62Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEVQTHVGALDPAWEGPFEIKGIVRPGTYVLADLK
        MEIGAPE SWMDPIADFIRG+SPQDP E RKLARRAARFVVR GALYRRGFSLPLLRCLTP+EGLY ++     +     G   +   V P  Y    L 
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEVQTHVGALDPAWEGPFEIKGIVRPGTYVLADLK

Query:  GDVLAHPWNAEHLKRY
         D        ++ +RY
Subjt:  GDVLAHPWNAEHLKRY

A0A6J1CQD7 Ribonuclease H3.0e-2896.97Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLY
        MEIGAPE SWMDPIADFIRG+SPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLY
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLY

A0A6J1DW30 Ribonuclease H9.8e-2778.95Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEVQTHVGALD
        MEIGAPE SWM+PI DFI+G+SPQDPKERRKLARRAARFV+RDGALYRRGFSLPLL+CLTPEEGL + +  V   D
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEVQTHVGALD

A0A6J1DYS0 Ribonuclease H3.4e-2786.49Show/hide
Query:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEV-QTHVG
        MEIGAPE SWMDPIADFIRG+SPQDPKERRKLA R ARFVVRDGALYRRGFSLPLLRCLTPEEGLY + + H G
Subjt:  MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEV-QTHVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGCGCTCCAGAACCCTCATGGATGGACCCGATCGCGGACTTCATTAGGGGCGACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGC
TCGGTTCGTGGTCCGAGATGGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTGTTGAGATGCCTAACCCCTGAAGAGGGCCTGTACGAGGTCCAAACGCATGTGGGTG
CCCTTGATCCGGCCTGGGAAGGCCCATTTGAGATCAAGGGCATAGTCCGACCTGGGACGTACGTATTGGCCGATCTGAAAGGAGATGTCCTCGCGCACCCGTGGAACGCG
GAACACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGCGCTCCAGAACCCTCATGGATGGACCCGATCGCGGACTTCATTAGGGGCGACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGC
TCGGTTCGTGGTCCGAGATGGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTGTTGAGATGCCTAACCCCTGAAGAGGGCCTGTACGAGGTCCAAACGCATGTGGGTG
CCCTTGATCCGGCCTGGGAAGGCCCATTTGAGATCAAGGGCATAGTCCGACCTGGGACGTACGTATTGGCCGATCTGAAAGGAGATGTCCTCGCGCACCCGTGGAACGCG
GAACACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MEIGAPEPSWMDPIADFIRGDSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTPEEGLYEVQTHVGALDPAWEGPFEIKGIVRPGTYVLADLKGDVLAHPWNA
EHLKRYYP